RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, human

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSEN1-205	ENST00000406768	CGN	Q9P2M7	1197 aa	Known RBP	11.36	□□□□□ -0.59
PSEN1-205	ENST00000406768	RUSC2	Q8N2Y8	1516 aa		11.36	□□□□□ -0.59
PSEN1-205	ENST00000406768	POLA1	P09884	1462 aa	Predicted RBP	11.36	□□□□□ -0.59
PSEN1-205	ENST00000406768	CBX1	P83916	185 aa		11.35	□□□□□ -0.59
PSEN1-205	ENST00000406768	CUL7	Q14999	1698 aa		11.35	□□□□□ -0.59
PSEN1-205	ENST00000406768	CCDC7	Q96M83	1385 aa		11.35	□□□□□ -0.59
PSEN1-205	ENST00000406768	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.35	□□□□□ -0.59
PSEN1-205	ENST00000406768	HMGN5	P82970	282 aa	Known RBP	11.35	□□□□□ -0.59
PSEN1-205	ENST00000406768	DYNC1I1	O14576	645 aa		11.34	□□□□□ -0.59
PSEN1-205	ENST00000406768	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.34	□□□□□ -0.59
PSEN1-205	ENST00000406768	FHAD1	B1AJZ9	1412 aa		11.34	□□□□□ -0.59
PSEN1-205	ENST00000406768	LETM1	O95202	739 aa	Predicted RBP	11.33	□□□□□ -0.6
PSEN1-205	ENST00000406768	CUX2	O14529	1486 aa		11.32	□□□□□ -0.6
PSEN1-205	ENST00000406768	IFT140	Q96RY7	1462 aa		11.32	□□□□□ -0.6
PSEN1-205	ENST00000406768	PRX	Q9BXM0	1461 aa		11.32	□□□□□ -0.6
PSEN1-205	ENST00000406768	L3MBTL2	Q969R5	705 aa		11.32	□□□□□ -0.6
PSEN1-205	ENST00000406768	FOXD4L1	Q9NU39	408 aa		11.32	□□□□□ -0.6
PSEN1-205	ENST00000406768	ERCC6	Q03468	1493 aa		11.32	□□□□□ -0.6
PSEN1-205	ENST00000406768	NLRP13	Q86W25	1043 aa		11.32	□□□□□ -0.6
PSEN1-205	ENST00000406768	RRBP1	Q9P2E9	1410 aa	Known RBP	11.32	□□□□□ -0.6
PSEN1-205	ENST00000406768	PPP4R3B	Q5MIZ7	849 aa		11.32	□□□□□ -0.6
PSEN1-205	ENST00000406768	CARD11	Q9BXL7	1154 aa		11.32	□□□□□ -0.6
PSEN1-205	ENST00000406768	GTPBP4	Q9BZE4	634 aa	Known RBP	11.32	□□□□□ -0.6
PSEN1-205	ENST00000406768	OFD1	O75665	1012 aa		11.31	□□□□□ -0.6
PSEN1-205	ENST00000406768	CCDC39	Q9UFE4	941 aa		11.31	□□□□□ -0.6
PSEN1-205	ENST00000406768	MTUS2	Q5JR59	1369 aa		11.31	□□□□□ -0.6
PSEN1-205	ENST00000406768	KIF20A	O95235	890 aa		11.31	□□□□□ -0.6
PSEN1-205	ENST00000406768	SASS6	Q6UVJ0	657 aa		11.31	□□□□□ -0.6
PSEN1-205	ENST00000406768	PMFBP1	Q8TBY8	1022 aa		11.31	□□□□□ -0.6
PSEN1-205	ENST00000406768	KDM2A	Q9Y2K7	1162 aa		11.3	□□□□□ -0.6
PSEN1-205	ENST00000406768	THOC2	Q8NI27	1593 aa	Known RBP	11.3	□□□□□ -0.6
PSEN1-205	ENST00000406768	VGLL3	A8MV65	326 aa		11.3	□□□□□ -0.6
PSEN1-205	ENST00000406768	ABCA5	Q8WWZ7	1642 aa		11.3	□□□□□ -0.6
PSEN1-205	ENST00000406768	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.3	□□□□□ -0.6
PSEN1-205	ENST00000406768	XPC	Q01831	940 aa	Predicted RBP	11.3	□□□□□ -0.6
PSEN1-205	ENST00000406768	AEBP1	Q8IUX7	1158 aa		11.3	□□□□□ -0.6
PSEN1-205	ENST00000406768	CC2D1B	Q5T0F9	858 aa	Known RBP	11.3	□□□□□ -0.6
PSEN1-205	ENST00000406768	IPO4	Q8TEX9	1081 aa	Known RBP	11.3	□□□□□ -0.6
PSEN1-205	ENST00000406768	RWDD1	Q9H446	243 aa	Predicted RBP	11.29	□□□□□ -0.6
PSEN1-205	ENST00000406768	CCDC94	Q9BW85	323 aa	Predicted RBP	11.29	□□□□□ -0.6
PSEN1-205	ENST00000406768	TARBP1	Q13395	1621 aa	Known RBP	11.29	□□□□□ -0.6
PSEN1-205	ENST00000406768	KIF7	Q2M1P5	1343 aa		11.28	□□□□□ -0.6
PSEN1-205	ENST00000406768	FTSJ3	Q8IY81	847 aa	Known RBP	11.28	□□□□□ -0.6
PSEN1-205	ENST00000406768		E9PSI1	815 aa		11.28	□□□□□ -0.6
PSEN1-205	ENST00000406768	IRX3	P78415	501 aa	Predicted RBP	11.28	□□□□□ -0.6
PSEN1-205	ENST00000406768	TPRN	Q4KMQ1	711 aa		11.28	□□□□□ -0.6
PSEN1-205	ENST00000406768	CHMP4A	Q9BY43	222 aa		11.28	□□□□□ -0.6
PSEN1-205	ENST00000406768	GOLGA2	Q08379	1002 aa		11.28	□□□□□ -0.6
PSEN1-205	ENST00000406768	DNAJC5	Q9H3Z4	198 aa		11.28	□□□□□ -0.6
PSEN1-205	ENST00000406768	PNISR	Q8TF01	805 aa	Known RBP	11.27	□□□□□ -0.6
PSEN1-205	ENST00000406768	SYAP1	Q96A49	352 aa	Predicted RBP	11.27	□□□□□ -0.6
PSEN1-205	ENST00000406768	DIAPH3	Q9NSV4	1193 aa		11.27	□□□□□ -0.6
PSEN1-205	ENST00000406768	CDCA7L	Q96GN5	454 aa		11.27	□□□□□ -0.61
PSEN1-205	ENST00000406768	TERF1	P54274	439 aa		11.27	□□□□□ -0.61
PSEN1-205	ENST00000406768	C22orf23	Q9BZE7	217 aa		11.26	□□□□□ -0.61
PSEN1-205	ENST00000406768	KIF15	Q9NS87	1388 aa		11.26	□□□□□ -0.61
PSEN1-205	ENST00000406768	RAPGEF2	Q9Y4G8	1499 aa		11.26	□□□□□ -0.61
PSEN1-205	ENST00000406768	GOLGA6L6	A8MZA4	724 aa		11.26	□□□□□ -0.61
PSEN1-205	ENST00000406768	PDCL2	Q8N4E4	241 aa		11.26	□□□□□ -0.61
PSEN1-205	ENST00000406768	KCNJ4	P48050	445 aa		11.25	□□□□□ -0.61
PSEN1-205	ENST00000406768	KIF3A	Q9Y496	699 aa		11.25	□□□□□ -0.61
PSEN1-205	ENST00000406768	ROCK2	O75116	1388 aa	Known RBP	11.25	□□□□□ -0.61
PSEN1-205	ENST00000406768	CGNL1	Q0VF96	1302 aa		11.24	□□□□□ -0.61
PSEN1-205	ENST00000406768	PHLDB1	Q86UU1	1377 aa		11.24	□□□□□ -0.61
PSEN1-205	ENST00000406768	IGF1R	P08069	1367 aa		11.23	□□□□□ -0.61
PSEN1-205	ENST00000406768	DNAJC2	Q99543	621 aa	Known RBP	11.23	□□□□□ -0.61
PSEN1-205	ENST00000406768	GAPVD1	Q14C86	1478 aa		11.23	□□□□□ -0.61
PSEN1-205	ENST00000406768	UTP14C	Q5TAP6	766 aa	Known RBP	11.23	□□□□□ -0.61
PSEN1-205	ENST00000406768	TBC1D2	Q9BYX2	928 aa		11.23	□□□□□ -0.61
PSEN1-205	ENST00000406768	FMN1	Q68DA7	1419 aa		11.23	□□□□□ -0.61
PSEN1-205	ENST00000406768	RNF123	Q5XPI4	1314 aa		11.22	□□□□□ -0.61
PSEN1-205	ENST00000406768	C8orf34	Q49A92	452 aa		11.22	□□□□□ -0.61
PSEN1-205	ENST00000406768	CAVIN1	Q6NZI2	390 aa	Known RBP	11.22	□□□□□ -0.61
PSEN1-205	ENST00000406768	DRC7	Q8IY82	874 aa		11.22	□□□□□ -0.61
PSEN1-205	ENST00000406768	DMTN	Q08495	405 aa		11.22	□□□□□ -0.61
PSEN1-205	ENST00000406768	FOXD1	Q16676	465 aa		11.22	□□□□□ -0.61
PSEN1-205	ENST00000406768	TSPYL1	Q9H0U9	437 aa		11.22	□□□□□ -0.61
PSEN1-205	ENST00000406768	CARMIL1	Q5VZK9	1371 aa		11.22	□□□□□ -0.61
PSEN1-205	ENST00000406768	RAD54L2	Q9Y4B4	1467 aa		11.21	□□□□□ -0.61
PSEN1-205	ENST00000406768	PBRM1	Q86U86	1689 aa		11.21	□□□□□ -0.61
PSEN1-205	ENST00000406768	GOLGA6L1	Q8N7Z2	621 aa		11.21	□□□□□ -0.61
PSEN1-205	ENST00000406768	KNSTRN	Q9Y448	316 aa		11.21	□□□□□ -0.61
PSEN1-205	ENST00000406768	ARHGAP35	Q9NRY4	1499 aa		11.21	□□□□□ -0.61
PSEN1-205	ENST00000406768	PHF14	O94880	888 aa		11.21	□□□□□ -0.62
PSEN1-205	ENST00000406768	SPDYE4	A6NLX3	237 aa		11.2	□□□□□ -0.62
PSEN1-205	ENST00000406768	RNF214	Q8ND24	703 aa		11.2	□□□□□ -0.62
PSEN1-205	ENST00000406768	GRIN2B	Q13224	1484 aa		11.2	□□□□□ -0.62
PSEN1-205	ENST00000406768	MCTP1	Q6DN14	999 aa		11.2	□□□□□ -0.62
PSEN1-205	ENST00000406768	MPHOSPH9	Q99550	1183 aa		11.2	□□□□□ -0.62
PSEN1-205	ENST00000406768	MCM5	P33992	734 aa		11.2	□□□□□ -0.62
PSEN1-205	ENST00000406768	NBPF1	Q3BBV0	1214 aa		11.2	□□□□□ -0.62
PSEN1-205	ENST00000406768	NEUROD2	Q15784	382 aa		11.2	□□□□□ -0.62
PSEN1-205	ENST00000406768	COG6	Q9Y2V7	657 aa		11.2	□□□□□ -0.62
PSEN1-205	ENST00000406768	BRD4	O60885	1362 aa	Predicted RBP	11.19	□□□□□ -0.62
PSEN1-205	ENST00000406768	CALCOCO1	Q9P1Z2	691 aa		11.19	□□□□□ -0.62
PSEN1-205	ENST00000406768	TIGD1	Q96MW7	591 aa		11.19	□□□□□ -0.62
PSEN1-205	ENST00000406768	HTATSF1	O43719	755 aa	Known RBP	11.18	□□□□□ -0.62
PSEN1-205	ENST00000406768	CASC1	Q6TDU7	716 aa		11.18	□□□□□ -0.62
PSEN1-205	ENST00000406768	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.18	□□□□□ -0.62
PSEN1-205	ENST00000406768	CCDC18	Q5T9S5	1454 aa		11.18	□□□□□ -0.62

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