RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 NUDCQ9Y266 331 aa20.04■□□□□ 0.8
ATG4B-206ENST00000405546 NUP160Q12769 1436 aa20.04■□□□□ 0.8
ATG4B-206ENST00000405546 PNISRQ8TF01 805 aaKnown RBP20.03■□□□□ 0.8
ATG4B-206ENST00000405546 CCDC144AA2RUR9 1427 aa20.03■□□□□ 0.8
ATG4B-206ENST00000405546 DHX29Q7Z478 1369 aaKnown RBP20.01■□□□□ 0.79
ATG4B-206ENST00000405546 BRPF3Q9ULD4 1205 aa20.01■□□□□ 0.79
ATG4B-206ENST00000405546 RSPH4AQ5TD94 716 aa20■□□□□ 0.79
ATG4B-206ENST00000405546 ERICH6BQ5W0A0 696 aa20■□□□□ 0.79
ATG4B-206ENST00000405546 ITSN2Q9NZM3 1697 aa19.99■□□□□ 0.79
ATG4B-206ENST00000405546 SLC4A3P48751 1232 aa19.98■□□□□ 0.79
ATG4B-206ENST00000405546 ADGRL2O95490 1459 aa19.97■□□□□ 0.79
ATG4B-206ENST00000405546 MYBBP1AQ9BQG0 1328 aaKnown RBP19.96■□□□□ 0.79
ATG4B-206ENST00000405546 RALBP1Q15311 655 aa19.96■□□□□ 0.79
ATG4B-206ENST00000405546 PANK3Q9H999 370 aa19.96■□□□□ 0.79
ATG4B-206ENST00000405546 ARHGAP5Q13017 1502 aa19.95■□□□□ 0.78
ATG4B-206ENST00000405546 EFCAB2Q5VUJ9 269 aa19.95■□□□□ 0.78
ATG4B-206ENST00000405546 AFAP1Q8N556 730 aa19.95■□□□□ 0.78
ATG4B-206ENST00000405546 ARID4BQ4LE39 1312 aaPredicted RBP19.94■□□□□ 0.78
ATG4B-206ENST00000405546 ABCC10Q5T3U5 1492 aa19.93■□□□□ 0.78
ATG4B-206ENST00000405546 KTN1Q86UP2 1357 aaKnown RBP19.92■□□□□ 0.78
ATG4B-206ENST00000405546 CCDC141Q6ZP82 1450 aa19.92■□□□□ 0.78
ATG4B-206ENST00000405546 TMF1P82094 1093 aa19.91■□□□□ 0.78
ATG4B-206ENST00000405546 NLRP13Q86W25 1043 aa19.91■□□□□ 0.78
ATG4B-206ENST00000405546 CHGAP10645 457 aaKnown RBP19.91■□□□□ 0.78
ATG4B-206ENST00000405546 EXOC6Q8TAG9 804 aa19.89■□□□□ 0.78
ATG4B-206ENST00000405546 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
ATG4B-206ENST00000405546 CDCA7LQ96GN5 454 aa19.89■□□□□ 0.77
ATG4B-206ENST00000405546 BCORL1Q5H9F3 1711 aa19.88■□□□□ 0.77
ATG4B-206ENST00000405546 PLEKHH2Q8IVE3 1493 aa19.88■□□□□ 0.77
ATG4B-206ENST00000405546 ABCA8O94911 1581 aa19.88■□□□□ 0.77
ATG4B-206ENST00000405546 ADGBQ8N7X0 1667 aa19.87■□□□□ 0.77
ATG4B-206ENST00000405546 MBD5Q9P267 1494 aa19.87■□□□□ 0.77
ATG4B-206ENST00000405546 SPAG9O60271 1321 aaKnown RBP19.87■□□□□ 0.77
ATG4B-206ENST00000405546 RALGAPBQ86X10 1494 aa19.87■□□□□ 0.77
ATG4B-206ENST00000405546 RCAN3Q9UKA8 241 aa19.86■□□□□ 0.77
ATG4B-206ENST00000405546 KNSTRNQ9Y448 316 aa19.86■□□□□ 0.77
ATG4B-206ENST00000405546 CDC42BPAQ5VT25 1732 aa19.86■□□□□ 0.77
ATG4B-206ENST00000405546 PLIN1O60240 522 aa19.86■□□□□ 0.77
ATG4B-206ENST00000405546 SMG6Q86US8 1419 aaKnown RBP19.86■□□□□ 0.77
ATG4B-206ENST00000405546 SYCP2Q9BX26 1530 aa19.85■□□□□ 0.77
ATG4B-206ENST00000405546 KIF3BO15066 747 aa19.84■□□□□ 0.77
ATG4B-206ENST00000405546 FAM135AQ9P2D6 1515 aa19.83■□□□□ 0.77
ATG4B-206ENST00000405546 PDE4AP27815 886 aa19.83■□□□□ 0.77
ATG4B-206ENST00000405546 UHRF1BP1Q6BDS2 1440 aa19.83■□□□□ 0.76
ATG4B-206ENST00000405546 SHANK2Q9UPX8 1470 aa19.82■□□□□ 0.76
ATG4B-206ENST00000405546 BRD4O60885 1362 aaPredicted RBP19.82■□□□□ 0.76
ATG4B-206ENST00000405546 WDR43Q15061 677 aaKnown RBP eCLIP19.81■□□□□ 0.76
ATG4B-206ENST00000405546 KDM5CP41229 1560 aa19.8■□□□□ 0.76
ATG4B-206ENST00000405546 DISP3Q9P2K9 1392 aa19.8■□□□□ 0.76
ATG4B-206ENST00000405546 ADCY10Q96PN6 1610 aa19.79■□□□□ 0.76
ATG4B-206ENST00000405546 RRP1P56182 461 aaKnown RBP19.78■□□□□ 0.76
ATG4B-206ENST00000405546 PRAG1Q86YV5 1406 aa19.78■□□□□ 0.76
ATG4B-206ENST00000405546 ARXQ96QS3 562 aa19.77■□□□□ 0.76
ATG4B-206ENST00000405546 TESK2Q96S53 571 aa19.77■□□□□ 0.76
ATG4B-206ENST00000405546 PER1O15534 1290 aaPredicted RBP19.77■□□□□ 0.75
ATG4B-206ENST00000405546 SAMD9LQ8IVG5 1584 aa19.76■□□□□ 0.75
ATG4B-206ENST00000405546 CROCC2H7BZ55 1655 aa19.75■□□□□ 0.75
ATG4B-206ENST00000405546 ADAMTS8Q9UP79 889 aa19.75■□□□□ 0.75
ATG4B-206ENST00000405546 ARHGEF12Q9NZN5 1544 aa19.73■□□□□ 0.75
ATG4B-206ENST00000405546 TNNT2P45379 298 aaPredicted RBP19.72■□□□□ 0.75
ATG4B-206ENST00000405546 ERCC6L2Q5T890 1561 aa19.72■□□□□ 0.75
ATG4B-206ENST00000405546 CCDC146Q8IYE0 955 aa19.72■□□□□ 0.75
ATG4B-206ENST00000405546 FRAT1Q92837 279 aaPredicted RBP19.72■□□□□ 0.75
ATG4B-206ENST00000405546 PLA2R1Q13018 1463 aa19.72■□□□□ 0.75
ATG4B-206ENST00000405546 ERBINQ96RT1 1412 aa19.71■□□□□ 0.75
ATG4B-206ENST00000405546 A2MP01023 1474 aa19.71■□□□□ 0.75
ATG4B-206ENST00000405546 TRAPPC8Q9Y2L5 1435 aa19.71■□□□□ 0.75
ATG4B-206ENST00000405546 DAXXQ9UER7 740 aaPredicted RBP19.7■□□□□ 0.74
ATG4B-206ENST00000405546 GGT6Q6P531 493 aa19.7■□□□□ 0.74
ATG4B-206ENST00000405546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.69■□□□□ 0.74
ATG4B-206ENST00000405546 CFAP70Q5T0N1 1121 aa19.69■□□□□ 0.74
ATG4B-206ENST00000405546 TTC37Q6PGP7 1564 aa19.68■□□□□ 0.74
ATG4B-206ENST00000405546 NFKBIBQ15653 356 aa19.68■□□□□ 0.74
ATG4B-206ENST00000405546 GSE1Q14687 1217 aa19.68■□□□□ 0.74
ATG4B-206ENST00000405546 CDCA8Q53HL2 280 aa19.68■□□□□ 0.74
ATG4B-206ENST00000405546 ARHGEF5Q12774 1597 aa19.67■□□□□ 0.74
ATG4B-206ENST00000405546 BACH2Q9BYV9 841 aa19.67■□□□□ 0.74
ATG4B-206ENST00000405546 PDE3BQ13370 1112 aa19.67■□□□□ 0.74
ATG4B-206ENST00000405546 CDC42BPBQ9Y5S2 1711 aa19.67■□□□□ 0.74
ATG4B-206ENST00000405546 NPM1P06748 294 aaKnown RBP eCLIP19.66■□□□□ 0.74
ATG4B-206ENST00000405546 NUTM2DQ5VT03 806 aaPredicted RBP19.66■□□□□ 0.74
ATG4B-206ENST00000405546 LRPPRCP42704 1394 aaKnown RBP19.66■□□□□ 0.74
ATG4B-206ENST00000405546 PARD3Q8TEW0 1356 aa19.66■□□□□ 0.74
ATG4B-206ENST00000405546 NEUROD2Q15784 382 aa19.65■□□□□ 0.74
ATG4B-206ENST00000405546 KANK1Q14678 1352 aa19.65■□□□□ 0.74
ATG4B-206ENST00000405546 PPM1GO15355 546 aaPredicted RBP19.65■□□□□ 0.74
ATG4B-206ENST00000405546 CRBNQ96SW2 442 aa19.65■□□□□ 0.74
ATG4B-206ENST00000405546 PLCH2O75038 1416 aa19.65■□□□□ 0.74
ATG4B-206ENST00000405546 PPP2R1AP30153 589 aa19.64■□□□□ 0.74
ATG4B-206ENST00000405546 SCAPERQ9BY12 1400 aa19.64■□□□□ 0.73
ATG4B-206ENST00000405546 RNF123Q5XPI4 1314 aa19.63■□□□□ 0.73
ATG4B-206ENST00000405546 TCERG1O14776 1098 aaKnown RBP19.63■□□□□ 0.73
ATG4B-206ENST00000405546 KDM5DQ9BY66 1539 aa19.62■□□□□ 0.73
ATG4B-206ENST00000405546 PREX2Q70Z35 1606 aa19.61■□□□□ 0.73
ATG4B-206ENST00000405546 TRAK1Q9UPV9 953 aa19.61■□□□□ 0.73
ATG4B-206ENST00000405546 UBE2Q2Q8WVN8 375 aa19.61■□□□□ 0.73
ATG4B-206ENST00000405546 CHD1O14646 1710 aa19.6■□□□□ 0.73
ATG4B-206ENST00000405546 POLR1AO95602 1720 aaPredicted RBP19.6■□□□□ 0.73
ATG4B-206ENST00000405546 ABCC2Q92887 1545 aa19.59■□□□□ 0.73
ATG4B-206ENST00000405546 FRAT2O75474 233 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms