RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 HMGXB3Q12766 1538 aa17.58■□□□□ 0.4
GSE1-203ENST00000405402 CDK13Q14004 1512 aaKnown RBP17.58■□□□□ 0.4
GSE1-203ENST00000405402 ADAMTS8Q9UP79 889 aa17.58■□□□□ 0.4
GSE1-203ENST00000405402 FANCIQ9NVI1 1328 aa17.57■□□□□ 0.4
GSE1-203ENST00000405402 COG6Q9Y2V7 657 aa17.57■□□□□ 0.4
GSE1-203ENST00000405402 PNISRQ8TF01 805 aaKnown RBP17.56■□□□□ 0.4
GSE1-203ENST00000405402 NUTM2FA1L443 756 aa17.55■□□□□ 0.4
GSE1-203ENST00000405402 ITPRIPQ8IWB1 547 aa17.55■□□□□ 0.4
GSE1-203ENST00000405402 PAK3O75914 559 aaPredicted RBP17.55■□□□□ 0.4
GSE1-203ENST00000405402 GZF1Q9H116 711 aaPredicted RBP17.55■□□□□ 0.4
GSE1-203ENST00000405402 WASHC2CQ9Y4E1 1318 aa17.55■□□□□ 0.4
GSE1-203ENST00000405402 SKAP1Q86WV1 359 aa17.54■□□□□ 0.4
GSE1-203ENST00000405402 ELL2O00472 640 aaPredicted RBP17.54■□□□□ 0.4
GSE1-203ENST00000405402 PTPRKQ15262 1439 aa17.53■□□□□ 0.4
GSE1-203ENST00000405402 CENPJQ9HC77 1338 aaPredicted RBP17.52■□□□□ 0.4
GSE1-203ENST00000405402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.52■□□□□ 0.4
GSE1-203ENST00000405402 SMC4Q9NTJ3 1288 aa17.51■□□□□ 0.39
GSE1-203ENST00000405402 TMEM132EQ6IEE7 984 aa17.51■□□□□ 0.39
GSE1-203ENST00000405402 LMOD2Q6P5Q4 547 aa17.5■□□□□ 0.39
GSE1-203ENST00000405402 MSH5O43196 834 aa17.49■□□□□ 0.39
GSE1-203ENST00000405402 MFAP1P55081 439 aaKnown RBP17.49■□□□□ 0.39
GSE1-203ENST00000405402 CFAP70Q5T0N1 1121 aa17.49■□□□□ 0.39
GSE1-203ENST00000405402 MAPKBP1O60336 1514 aa17.48■□□□□ 0.39
GSE1-203ENST00000405402 GRIN2BQ13224 1484 aa17.48■□□□□ 0.39
GSE1-203ENST00000405402 EFCAB5A4FU69 1503 aa17.47■□□□□ 0.39
GSE1-203ENST00000405402 PEG3Q9GZU2 1588 aa17.47■□□□□ 0.39
GSE1-203ENST00000405402 HSP90AB1P08238 724 aaKnown RBP17.47■□□□□ 0.39
GSE1-203ENST00000405402 DAPK1P53355 1430 aa17.45■□□□□ 0.38
GSE1-203ENST00000405402 EPRSP07814 1512 aaKnown RBP17.45■□□□□ 0.38
GSE1-203ENST00000405402 ABCA10Q8WWZ4 1543 aa17.45■□□□□ 0.38
GSE1-203ENST00000405402 CYB5RLQ6IPT4 315 aa17.44■□□□□ 0.38
GSE1-203ENST00000405402 RWDD1Q9H446 243 aaPredicted RBP17.44■□□□□ 0.38
GSE1-203ENST00000405402 FOXD4L1Q9NU39 408 aa17.44■□□□□ 0.38
GSE1-203ENST00000405402 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.44■□□□□ 0.38
GSE1-203ENST00000405402 PANK1Q8TE04 598 aa17.44■□□□□ 0.38
GSE1-203ENST00000405402 TRIM44Q96DX7 344 aaPredicted RBP17.44■□□□□ 0.38
GSE1-203ENST00000405402 MINK1Q8N4C8 1332 aaPredicted RBP17.44■□□□□ 0.38
GSE1-203ENST00000405402 HDGFL2Q7Z4V5 671 aaPredicted RBP17.44■□□□□ 0.38
GSE1-203ENST00000405402 ANKRD30BQ9BXX2 1392 aa17.44■□□□□ 0.38
GSE1-203ENST00000405402 KIAA1107Q9UPP5 1409 aa17.43■□□□□ 0.38
GSE1-203ENST00000405402 EIF3AQ14152 1382 aaKnown RBP17.43■□□□□ 0.38
GSE1-203ENST00000405402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.42■□□□□ 0.384e-7■■■■■ 73.7
GSE1-203ENST00000405402 CENPQQ7L2Z9 268 aaPredicted RBP17.42■□□□□ 0.38
GSE1-203ENST00000405402 EHBP1L1Q8N3D4 1523 aa17.42■□□□□ 0.38
GSE1-203ENST00000405402 MIA2Q96PC5 1412 aa17.42■□□□□ 0.38
GSE1-203ENST00000405402 MS4A1P11836 297 aa17.42■□□□□ 0.38
GSE1-203ENST00000405402 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
GSE1-203ENST00000405402 FAM161AQ3B820 660 aa17.41■□□□□ 0.38
GSE1-203ENST00000405402 HSCBQ8IWL3 235 aa17.41■□□□□ 0.38
GSE1-203ENST00000405402 PPP2R1AP30153 589 aa17.4■□□□□ 0.38
GSE1-203ENST00000405402 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
GSE1-203ENST00000405402 GOLGA6L22H0YM25 854 aa17.39■□□□□ 0.37
GSE1-203ENST00000405402 BRD4O60885 1362 aaPredicted RBP17.39■□□□□ 0.37
GSE1-203ENST00000405402 C9orf84Q5VXU9 1444 aa17.39■□□□□ 0.37
GSE1-203ENST00000405402 E9PSI1 815 aa17.39■□□□□ 0.37
GSE1-203ENST00000405402 TROQ12816 1431 aaPredicted RBP17.39■□□□□ 0.37
GSE1-203ENST00000405402 BCAR3O75815 825 aa17.38■□□□□ 0.37
GSE1-203ENST00000405402 A0A0G2JS52 829 aa17.38■□□□□ 0.37
GSE1-203ENST00000405402 ABCC5O15440 1437 aa17.38■□□□□ 0.37
GSE1-203ENST00000405402 PLB1Q6P1J6 1458 aa17.37■□□□□ 0.37
GSE1-203ENST00000405402 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
GSE1-203ENST00000405402 BIVM-ERCC5R4GMW8 1640 aa17.37■□□□□ 0.37
GSE1-203ENST00000405402 IPO8O15397 1037 aaKnown RBP17.37■□□□□ 0.37
GSE1-203ENST00000405402 SLC12A5Q9H2X9 1139 aa17.37■□□□□ 0.37
GSE1-203ENST00000405402 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
GSE1-203ENST00000405402 PMFBP1Q8TBY8 1022 aa17.36■□□□□ 0.37
GSE1-203ENST00000405402 CABP2Q9NPB3 220 aa17.35■□□□□ 0.37
GSE1-203ENST00000405402 TERF2IPQ9NYB0 399 aa17.35■□□□□ 0.37
GSE1-203ENST00000405402 PNNQ9H307 717 aaKnown RBP17.35■□□□□ 0.37
GSE1-203ENST00000405402 MRC2Q9UBG0 1479 aa17.35■□□□□ 0.37
GSE1-203ENST00000405402 MTHFSP49914 203 aa17.34■□□□□ 0.37
GSE1-203ENST00000405402 SUPT6HQ7KZ85 1726 aaKnown RBP17.34■□□□□ 0.37
GSE1-203ENST00000405402 NAP1L5Q96NT1 182 aaPredicted RBP17.34■□□□□ 0.37
GSE1-203ENST00000405402 C20orf194Q5TEA3 1177 aa17.34■□□□□ 0.37
GSE1-203ENST00000405402 URB2Q14146 1524 aaKnown RBP17.34■□□□□ 0.37
GSE1-203ENST00000405402 TAOK2Q9UL54 1235 aa17.33■□□□□ 0.37
GSE1-203ENST00000405402 PTPN23Q9H3S7 1636 aa17.32■□□□□ 0.36
GSE1-203ENST00000405402 SLC4A10Q6U841 1118 aa17.32■□□□□ 0.36
GSE1-203ENST00000405402 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
GSE1-203ENST00000405402 CASC1Q6TDU7 716 aa17.32■□□□□ 0.36
GSE1-203ENST00000405402 MAP3K1Q13233 1512 aa17.32■□□□□ 0.36
GSE1-203ENST00000405402 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
GSE1-203ENST00000405402 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
GSE1-203ENST00000405402 PLCB2Q00722 1185 aa17.31■□□□□ 0.36
GSE1-203ENST00000405402 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
GSE1-203ENST00000405402 ZNF608Q9ULD9 1512 aaPredicted RBP17.3■□□□□ 0.36
GSE1-203ENST00000405402 ARHGAP5Q13017 1502 aa17.29■□□□□ 0.36
GSE1-203ENST00000405402 HMOX1P09601 288 aa17.29■□□□□ 0.36
GSE1-203ENST00000405402 ZKSCAN2Q63HK3 967 aa17.29■□□□□ 0.36
GSE1-203ENST00000405402 VGFO15240 615 aaPredicted RBP17.28■□□□□ 0.36
GSE1-203ENST00000405402 LTV1Q96GA3 475 aaPredicted RBP17.28■□□□□ 0.36
GSE1-203ENST00000405402 OS9Q13438 667 aaPredicted RBP17.28■□□□□ 0.36
GSE1-203ENST00000405402 RIPK4P57078 832 aa17.28■□□□□ 0.36
GSE1-203ENST00000405402 ANKRD45Q5TZF3 282 aa17.28■□□□□ 0.36
GSE1-203ENST00000405402 RTF1Q92541 710 aaKnown RBP17.28■□□□□ 0.36
GSE1-203ENST00000405402 NCOA1Q15788 1441 aa17.28■□□□□ 0.36
GSE1-203ENST00000405402 SMG6Q86US8 1419 aaKnown RBP17.27■□□□□ 0.36
GSE1-203ENST00000405402 EVC2Q86UK5 1308 aa17.27■□□□□ 0.36
GSE1-203ENST00000405402 NOL8Q76FK4 1167 aaKnown RBP17.27■□□□□ 0.35
GSE1-203ENST00000405402 HECW1Q76N89 1606 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms