RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 CHGAP10645 457 aaKnown RBP5.89□□□□□ -1.47
SMC6-203ENST00000402989 PPP4R2Q9NY27 417 aa5.89□□□□□ -1.47
SMC6-203ENST00000402989 CCDC144AA2RUR9 1427 aa5.89□□□□□ -1.47
SMC6-203ENST00000402989 ADGBQ8N7X0 1667 aa5.89□□□□□ -1.47
SMC6-203ENST00000402989 PREX2Q70Z35 1606 aa5.88□□□□□ -1.47
SMC6-203ENST00000402989 AFAP1Q8N556 730 aa5.88□□□□□ -1.47
SMC6-203ENST00000402989 SPATA31E1Q6ZUB1 1445 aa5.88□□□□□ -1.47
SMC6-203ENST00000402989 KIF13AQ9H1H9 1805 aa5.88□□□□□ -1.47
SMC6-203ENST00000402989 SYCP2Q9BX26 1530 aa5.88□□□□□ -1.47
SMC6-203ENST00000402989 CCDC136Q96JN2 1154 aa5.88□□□□□ -1.47
SMC6-203ENST00000402989 ERCC6L2Q5T890 1561 aa5.88□□□□□ -1.47
SMC6-203ENST00000402989 ZCCHC11Q5TAX3 1644 aaKnown RBP5.88□□□□□ -1.47
SMC6-203ENST00000402989 ANP32EQ9BTT0 268 aa5.88□□□□□ -1.47
SMC6-203ENST00000402989 ABCC10Q5T3U5 1492 aa5.87□□□□□ -1.47
SMC6-203ENST00000402989 DHX29Q7Z478 1369 aaKnown RBP5.87□□□□□ -1.47
SMC6-203ENST00000402989 CCDC141Q6ZP82 1450 aa5.87□□□□□ -1.47
SMC6-203ENST00000402989 PLEKHH2Q8IVE3 1493 aa5.87□□□□□ -1.47
SMC6-203ENST00000402989 DEPDC5O75140 1603 aa5.87□□□□□ -1.47
SMC6-203ENST00000402989 ADGRL2O95490 1459 aa5.86□□□□□ -1.47
SMC6-203ENST00000402989 PANK3Q9H999 370 aa5.86□□□□□ -1.47
SMC6-203ENST00000402989 NUDCQ9Y266 331 aa5.86□□□□□ -1.47
SMC6-203ENST00000402989 SAMD9LQ8IVG5 1584 aa5.85□□□□□ -1.47
SMC6-203ENST00000402989 EFCAB2Q5VUJ9 269 aa5.85□□□□□ -1.47
SMC6-203ENST00000402989 PNISRQ8TF01 805 aaKnown RBP5.85□□□□□ -1.47
SMC6-203ENST00000402989 NPM2Q86SE8 214 aaKnown RBP5.85□□□□□ -1.47
SMC6-203ENST00000402989 SPAG9O60271 1321 aaKnown RBP5.85□□□□□ -1.47
SMC6-203ENST00000402989 FAM135AQ9P2D6 1515 aa5.85□□□□□ -1.47
SMC6-203ENST00000402989 TTC37Q6PGP7 1564 aa5.85□□□□□ -1.47
SMC6-203ENST00000402989 KIF3BO15066 747 aa5.85□□□□□ -1.47
SMC6-203ENST00000402989 PLIN1O60240 522 aa5.85□□□□□ -1.47
SMC6-203ENST00000402989 CDCA7LQ96GN5 454 aa5.85□□□□□ -1.47
SMC6-203ENST00000402989 MBD5Q9P267 1494 aa5.84□□□□□ -1.47
SMC6-203ENST00000402989 MYT1Q01538 1121 aa5.84□□□□□ -1.47
SMC6-203ENST00000402989 KTN1Q86UP2 1357 aaKnown RBP5.84□□□□□ -1.47
SMC6-203ENST00000402989 MYBBP1AQ9BQG0 1328 aaKnown RBP5.84□□□□□ -1.47
SMC6-203ENST00000402989 KDM5CP41229 1560 aa5.84□□□□□ -1.47
SMC6-203ENST00000402989 RALGAPBQ86X10 1494 aa5.84□□□□□ -1.47
SMC6-203ENST00000402989 DISP3Q9P2K9 1392 aa5.84□□□□□ -1.48
SMC6-203ENST00000402989 NUTM2DQ5VT03 806 aaPredicted RBP5.84□□□□□ -1.48
SMC6-203ENST00000402989 ARHGEF5Q12774 1597 aa5.84□□□□□ -1.48
SMC6-203ENST00000402989 ADRA2BP18089 450 aa5.83□□□□□ -1.48
SMC6-203ENST00000402989 ABCC2Q92887 1545 aa5.83□□□□□ -1.48
SMC6-203ENST00000402989 TNNT2P45379 298 aaPredicted RBP5.83□□□□□ -1.48
SMC6-203ENST00000402989 TMF1P82094 1093 aa5.83□□□□□ -1.48
SMC6-203ENST00000402989 SKAP1Q86WV1 359 aa5.83□□□□□ -1.48
SMC6-203ENST00000402989 EXOC6Q8TAG9 804 aa5.83□□□□□ -1.48
SMC6-203ENST00000402989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.82□□□□□ -1.489e-7■■■□□ 17.5
SMC6-203ENST00000402989 RSPH4AQ5TD94 716 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 TRAPPC8Q9Y2L5 1435 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 PLXNC1O60486 1568 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 REREQ9P2R6 1566 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 SHANK2Q9UPX8 1470 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 NBR1Q14596 966 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 NLRP13Q86W25 1043 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 NEURL4Q96JN8 1562 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 RIMBP3CA6NJZ7 1639 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 RIMBP3BA6NNM3 1639 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 RIMBP3Q9UFD9 1639 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 RALBP1Q15311 655 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 GGT6Q6P531 493 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 CCDC146Q8IYE0 955 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 KNSTRNQ9Y448 316 aa5.82□□□□□ -1.48
SMC6-203ENST00000402989 A2MP01023 1474 aa5.81□□□□□ -1.48
SMC6-203ENST00000402989 PRAG1Q86YV5 1406 aa5.81□□□□□ -1.48
SMC6-203ENST00000402989 ARHGEF12Q9NZN5 1544 aa5.81□□□□□ -1.48
SMC6-203ENST00000402989 RICTORQ6R327 1708 aa5.81□□□□□ -1.48
SMC6-203ENST00000402989 MYO5CQ9NQX4 1742 aa5.81□□□□□ -1.48
SMC6-203ENST00000402989 WDR43Q15061 677 aaKnown RBP eCLIP5.81□□□□□ -1.48
SMC6-203ENST00000402989 RCAN3Q9UKA8 241 aa5.81□□□□□ -1.48
SMC6-203ENST00000402989 PLA2R1Q13018 1463 aa5.8□□□□□ -1.48
SMC6-203ENST00000402989 KDM5DQ9BY66 1539 aa5.8□□□□□ -1.48
SMC6-203ENST00000402989 FRMPD1Q5SYB0 1578 aa5.8□□□□□ -1.48
SMC6-203ENST00000402989 MAGI2Q86UL8 1455 aa5.8□□□□□ -1.48
SMC6-203ENST00000402989 SAFB2Q14151 953 aaKnown RBP eCLIP5.8□□□□□ -1.48
SMC6-203ENST00000402989 UHRF1BP1Q6BDS2 1440 aa5.8□□□□□ -1.48
SMC6-203ENST00000402989 SMG6Q86US8 1419 aaKnown RBP5.8□□□□□ -1.48
SMC6-203ENST00000402989 VWDEQ8N2E2 1590 aa5.8□□□□□ -1.48
SMC6-203ENST00000402989 INO80Q9ULG1 1556 aaPredicted RBP5.8□□□□□ -1.48
SMC6-203ENST00000402989 CFAP70Q5T0N1 1121 aa5.8□□□□□ -1.48
SMC6-203ENST00000402989 SCAPERQ9BY12 1400 aa5.8□□□□□ -1.48
SMC6-203ENST00000402989 NEUROD2Q15784 382 aa5.79□□□□□ -1.48
SMC6-203ENST00000402989 TESK2Q96S53 571 aa5.79□□□□□ -1.48
SMC6-203ENST00000402989 ERBINQ96RT1 1412 aa5.79□□□□□ -1.48
SMC6-203ENST00000402989 RRP1P56182 461 aaKnown RBP5.79□□□□□ -1.48
SMC6-203ENST00000402989 ADAMTS8Q9UP79 889 aa5.79□□□□□ -1.48
SMC6-203ENST00000402989 ARID4BQ4LE39 1312 aaPredicted RBP5.79□□□□□ -1.48
SMC6-203ENST00000402989 BRD4O60885 1362 aaPredicted RBP5.79□□□□□ -1.48
SMC6-203ENST00000402989 POLR1AO95602 1720 aaPredicted RBP5.79□□□□□ -1.48
SMC6-203ENST00000402989 RTN4Q9NQC3 1192 aaKnown RBP5.79□□□□□ -1.48
SMC6-203ENST00000402989 CFAP65Q6ZU64 1925 aaKnown RBP5.79□□□□□ -1.48
SMC6-203ENST00000402989 EIF2AK4Q9P2K8 1649 aaKnown RBP5.78□□□□□ -1.48
SMC6-203ENST00000402989 UNC13BO14795 1591 aa5.78□□□□□ -1.48
SMC6-203ENST00000402989 NPM1P06748 294 aaKnown RBP eCLIP5.78□□□□□ -1.48
SMC6-203ENST00000402989 TRAK1Q9UPV9 953 aa5.78□□□□□ -1.48
SMC6-203ENST00000402989 RNF17Q9BXT8 1623 aaKnown RBP5.78□□□□□ -1.48
SMC6-203ENST00000402989 SIGLEC1Q9BZZ2 1709 aa5.78□□□□□ -1.48
SMC6-203ENST00000402989 WDR7Q9Y4E6 1490 aa5.78□□□□□ -1.48
SMC6-203ENST00000402989 PER1O15534 1290 aaPredicted RBP5.77□□□□□ -1.49
SMC6-203ENST00000402989 ERICH6BQ5W0A0 696 aa5.77□□□□□ -1.49
SMC6-203ENST00000402989 TMEM132EQ6IEE7 984 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms