RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 ANKRD50Q9ULJ7 1429 aa12.08□□□□□ -0.48
LINC01139-201ENST00000400946 ZNF644Q9H582 1327 aaPredicted RBP12.08□□□□□ -0.48
LINC01139-201ENST00000400946 FKBP8Q14318 412 aa12.07□□□□□ -0.48
LINC01139-201ENST00000400946 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC01139-201ENST00000400946 ROCK2O75116 1388 aaKnown RBP12.06□□□□□ -0.48
LINC01139-201ENST00000400946 POLA2Q14181 598 aa12.06□□□□□ -0.48
LINC01139-201ENST00000400946 PRKRIP1Q9H875 184 aaPredicted RBP12.06□□□□□ -0.48
LINC01139-201ENST00000400946 TSHZ2Q9NRE2 1034 aa12.06□□□□□ -0.48
LINC01139-201ENST00000400946 NBPF8Q3BBV2 869 aa12.05□□□□□ -0.48
LINC01139-201ENST00000400946 MAST1Q9Y2H9 1570 aa12.05□□□□□ -0.48
LINC01139-201ENST00000400946 C9orf84Q5VXU9 1444 aa12.04□□□□□ -0.48
LINC01139-201ENST00000400946 UHRF1BP1LA0JNW5 1464 aa12.04□□□□□ -0.48
LINC01139-201ENST00000400946 RALGAPBQ86X10 1494 aa12.04□□□□□ -0.48
LINC01139-201ENST00000400946 PREX2Q70Z35 1606 aa12.04□□□□□ -0.48
LINC01139-201ENST00000400946 KDM5CP41229 1560 aa12.03□□□□□ -0.48
LINC01139-201ENST00000400946 ABCC2Q92887 1545 aa12.02□□□□□ -0.48
LINC01139-201ENST00000400946 KTN1Q86UP2 1357 aaKnown RBP12.02□□□□□ -0.49
LINC01139-201ENST00000400946 TSPY4P0CV99 314 aa12.01□□□□□ -0.49
LINC01139-201ENST00000400946 TSPY10P0CW01 314 aa12.01□□□□□ -0.49
LINC01139-201ENST00000400946 HNRNPUQ00839 825 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC01139-201ENST00000400946 KIF7Q2M1P5 1343 aa12.01□□□□□ -0.49
LINC01139-201ENST00000400946 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
LINC01139-201ENST00000400946 PLEKHH2Q8IVE3 1493 aa12.01□□□□□ -0.49
LINC01139-201ENST00000400946 ARID3CA6NKF2 412 aa12.01□□□□□ -0.49
LINC01139-201ENST00000400946 ZBED9Q6R2W3 1325 aa12□□□□□ -0.49
LINC01139-201ENST00000400946 KIF13AQ9H1H9 1805 aa12□□□□□ -0.49
LINC01139-201ENST00000400946 PKD2Q13563 968 aa12□□□□□ -0.49
LINC01139-201ENST00000400946 USP47Q96K76 1375 aa11.99□□□□□ -0.49
LINC01139-201ENST00000400946 CDC42BPBQ9Y5S2 1711 aa11.98□□□□□ -0.49
LINC01139-201ENST00000400946 C11orf95C9JLR9 678 aaPredicted RBP11.98□□□□□ -0.49
LINC01139-201ENST00000400946 PLSCR2Q9NRY7 297 aa11.98□□□□□ -0.49
LINC01139-201ENST00000400946 UNC13BO14795 1591 aa11.98□□□□□ -0.49
LINC01139-201ENST00000400946 NUP155O75694 1391 aa11.98□□□□□ -0.49
LINC01139-201ENST00000400946 PLXNC1O60486 1568 aa11.97□□□□□ -0.49
LINC01139-201ENST00000400946 DIP2BQ9P265 1576 aa11.97□□□□□ -0.49
LINC01139-201ENST00000400946 FAM69CQ0P6D2 419 aa11.97□□□□□ -0.49
LINC01139-201ENST00000400946 SAMD9LQ8IVG5 1584 aa11.97□□□□□ -0.49
LINC01139-201ENST00000400946 LAMC1P11047 1609 aa11.97□□□□□ -0.49
LINC01139-201ENST00000400946 KIF15Q9NS87 1388 aa11.96□□□□□ -0.49
LINC01139-201ENST00000400946 HAX1O00165 279 aa11.96□□□□□ -0.5
LINC01139-201ENST00000400946 ZNF777Q9ULD5 760 aaPredicted RBP11.96□□□□□ -0.5
LINC01139-201ENST00000400946 DHX29Q7Z478 1369 aaKnown RBP11.95□□□□□ -0.5
LINC01139-201ENST00000400946 ASXL2Q76L83 1435 aa11.95□□□□□ -0.5
LINC01139-201ENST00000400946 BCORL1Q5H9F3 1711 aa11.95□□□□□ -0.5
LINC01139-201ENST00000400946 MRS2Q9HD23 443 aa11.95□□□□□ -0.5
LINC01139-201ENST00000400946 ZCCHC11Q5TAX3 1644 aaKnown RBP11.95□□□□□ -0.5
LINC01139-201ENST00000400946 ATP10AO60312 1499 aa11.94□□□□□ -0.5
LINC01139-201ENST00000400946 PRKCSHP14314 528 aaPredicted RBP11.94□□□□□ -0.5
LINC01139-201ENST00000400946 FAM135AQ9P2D6 1515 aa11.93□□□□□ -0.5
LINC01139-201ENST00000400946 MYO5CQ9NQX4 1742 aa11.93□□□□□ -0.5
LINC01139-201ENST00000400946 IQGAP3Q86VI3 1631 aa11.93□□□□□ -0.5
LINC01139-201ENST00000400946 RTN4Q9NQC3 1192 aaKnown RBP11.91□□□□□ -0.5
LINC01139-201ENST00000400946 PPP4R2Q9NY27 417 aa11.91□□□□□ -0.5
LINC01139-201ENST00000400946 E9PCH4 1651 aa11.91□□□□□ -0.5
LINC01139-201ENST00000400946 MAGI2Q86UL8 1455 aa11.91□□□□□ -0.5
LINC01139-201ENST00000400946 SMG6Q86US8 1419 aaKnown RBP11.91□□□□□ -0.5
LINC01139-201ENST00000400946 EIF2AK4Q9P2K8 1649 aaKnown RBP11.91□□□□□ -0.5
LINC01139-201ENST00000400946 GLI2P10070 1586 aa11.91□□□□□ -0.5
LINC01139-201ENST00000400946 DUOX2Q9NRD8 1548 aa11.9□□□□□ -0.5
LINC01139-201ENST00000400946 INSRP06213 1382 aa11.9□□□□□ -0.5
LINC01139-201ENST00000400946 GPRASP1Q5JY77 1395 aa11.9□□□□□ -0.5
LINC01139-201ENST00000400946 TRPM1Q7Z4N2 1603 aa11.9□□□□□ -0.5
LINC01139-201ENST00000400946 ARAP3Q8WWN8 1544 aa11.9□□□□□ -0.5
LINC01139-201ENST00000400946 WASHC2CQ9Y4E1 1318 aa11.89□□□□□ -0.51
LINC01139-201ENST00000400946 ZMYM4Q5VZL5 1548 aa11.89□□□□□ -0.51
LINC01139-201ENST00000400946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC01139-201ENST00000400946 RALBP1Q15311 655 aa11.89□□□□□ -0.51
LINC01139-201ENST00000400946 BCANQ96GW7 911 aa11.89□□□□□ -0.51
LINC01139-201ENST00000400946 ERBINQ96RT1 1412 aa11.89□□□□□ -0.51
LINC01139-201ENST00000400946 BRD4O60885 1362 aaPredicted RBP11.88□□□□□ -0.51
LINC01139-201ENST00000400946 STAC3Q96MF2 364 aa11.88□□□□□ -0.51
LINC01139-201ENST00000400946 CCDC144AA2RUR9 1427 aa11.88□□□□□ -0.51
LINC01139-201ENST00000400946 ARHGAP5Q13017 1502 aa11.88□□□□□ -0.51
LINC01139-201ENST00000400946 WDR7Q9Y4E6 1490 aa11.87□□□□□ -0.51
LINC01139-201ENST00000400946 CCDC184Q52MB2 194 aa11.87□□□□□ -0.51
LINC01139-201ENST00000400946 CARD11Q9BXL7 1154 aa11.87□□□□□ -0.51
LINC01139-201ENST00000400946 ZBTB12Q9Y330 459 aaPredicted RBP11.87□□□□□ -0.51
LINC01139-201ENST00000400946 TTC37Q6PGP7 1564 aa11.86□□□□□ -0.51
LINC01139-201ENST00000400946 PRAG1Q86YV5 1406 aa11.86□□□□□ -0.51
LINC01139-201ENST00000400946 HNRNPMP52272 730 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC01139-201ENST00000400946 RBM19Q9Y4C8 960 aaKnown RBP11.86□□□□□ -0.51
LINC01139-201ENST00000400946 SYCP2Q9BX26 1530 aa11.86□□□□□ -0.51
LINC01139-201ENST00000400946 TSPOAP1O95153 1857 aa11.86□□□□□ -0.51
LINC01139-201ENST00000400946 RNF123Q5XPI4 1314 aa11.86□□□□□ -0.51
LINC01139-201ENST00000400946 ANP32EQ9BTT0 268 aa11.86□□□□□ -0.51
LINC01139-201ENST00000400946 PLCH2O75038 1416 aa11.85□□□□□ -0.51
LINC01139-201ENST00000400946 FAM9BQ8IZU0 186 aa11.85□□□□□ -0.51
LINC01139-201ENST00000400946 LRPPRCP42704 1394 aaKnown RBP11.85□□□□□ -0.51
LINC01139-201ENST00000400946 FANCIQ9NVI1 1328 aa11.84□□□□□ -0.51
LINC01139-201ENST00000400946 RTEL1-TNFRSF6BF6WH68 1400 aa11.84□□□□□ -0.51
LINC01139-201ENST00000400946 PRDM15P57071 1507 aaPredicted RBP11.84□□□□□ -0.51
LINC01139-201ENST00000400946 MAP3K4Q9Y6R4 1608 aa11.84□□□□□ -0.51
LINC01139-201ENST00000400946 PNISRQ8TF01 805 aaKnown RBP11.84□□□□□ -0.51
LINC01139-201ENST00000400946 AKT1S1Q96B36 256 aa11.84□□□□□ -0.51
LINC01139-201ENST00000400946 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
LINC01139-201ENST00000400946 PPRC1Q5VV67 1664 aaKnown RBP11.84□□□□□ -0.51
LINC01139-201ENST00000400946 MYBBP1AQ9BQG0 1328 aaKnown RBP11.83□□□□□ -0.51
LINC01139-201ENST00000400946 NUDCQ9Y266 331 aa11.83□□□□□ -0.52
LINC01139-201ENST00000400946 NEURL4Q96JN8 1562 aa11.82□□□□□ -0.52
LINC01139-201ENST00000400946 PLA2R1Q13018 1463 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms