RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 PATL2C9JE40 543 aaKnown RBP15.23■□□□□ 0.03
CACNA1C-219ENST00000399649 LMOD3Q0VAK6 560 aa15.23■□□□□ 0.03
CACNA1C-219ENST00000399649 GTF2E1P29083 439 aaPredicted RBP15.23■□□□□ 0.03
CACNA1C-219ENST00000399649 CCAR2Q8N163 923 aaKnown RBP15.22■□□□□ 0.03
CACNA1C-219ENST00000399649 FOXD4L5Q5VV16 416 aaPredicted RBP15.22■□□□□ 0.03
CACNA1C-219ENST00000399649 FOXD4L4Q8WXT5 416 aaPredicted RBP15.22■□□□□ 0.03
CACNA1C-219ENST00000399649 CHMP4CQ96CF2 233 aa15.22■□□□□ 0.03
CACNA1C-219ENST00000399649 DDX11L8A8MPP1 907 aa15.22■□□□□ 0.03
CACNA1C-219ENST00000399649 GOLGA6L19H0YKK7 550 aa15.22■□□□□ 0.03
CACNA1C-219ENST00000399649 FAM184AQ8NB25 1140 aa15.22■□□□□ 0.03
CACNA1C-219ENST00000399649 TIMELESSQ9UNS1 1208 aa15.22■□□□□ 0.03
CACNA1C-219ENST00000399649 WWC1Q8IX03 1113 aa15.21■□□□□ 0.02
CACNA1C-219ENST00000399649 FBXO3Q9UK99 471 aa15.21■□□□□ 0.02
CACNA1C-219ENST00000399649 ARHGAP35Q9NRY4 1499 aa15.19■□□□□ 0.02
CACNA1C-219ENST00000399649 CTDP1Q9Y5B0 961 aaPredicted RBP15.19■□□□□ 0.02
CACNA1C-219ENST00000399649 TERF2IPQ9NYB0 399 aa15.19■□□□□ 0.02
CACNA1C-219ENST00000399649 PKD2Q13563 968 aa15.19■□□□□ 0.02
CACNA1C-219ENST00000399649 TRIM34Q9BYJ4 488 aa15.19■□□□□ 0.02
CACNA1C-219ENST00000399649 SETD5Q9C0A6 1442 aa15.18■□□□□ 0.02
CACNA1C-219ENST00000399649 SYNE3Q6ZMZ3 975 aa15.18■□□□□ 0.02
CACNA1C-219ENST00000399649 AMOTL1Q8IY63 956 aa15.18■□□□□ 0.02
CACNA1C-219ENST00000399649 IPO9Q96P70 1041 aaKnown RBP15.18■□□□□ 0.02
CACNA1C-219ENST00000399649 CENPJQ9HC77 1338 aaPredicted RBP15.18■□□□□ 0.02
CACNA1C-219ENST00000399649 PCMTD1Q96MG8 357 aaPredicted RBP15.18■□□□□ 0.02
CACNA1C-219ENST00000399649 CALRP27797 417 aaKnown RBP15.17■□□□□ 0.02
CACNA1C-219ENST00000399649 AMPHP49418 695 aa15.17■□□□□ 0.02
CACNA1C-219ENST00000399649 AEBP2Q6ZN18 517 aaPredicted RBP15.17■□□□□ 0.02
CACNA1C-219ENST00000399649 BECN2A8MW95 431 aa15.17■□□□□ 0.02
CACNA1C-219ENST00000399649 NOL10Q9BSC4 688 aaKnown RBP15.17■□□□□ 0.02
CACNA1C-219ENST00000399649 CCDC47Q96A33 483 aaKnown RBP15.16■□□□□ 0.02
CACNA1C-219ENST00000399649 ATP6V1DQ9Y5K8 247 aa15.16■□□□□ 0.02
CACNA1C-219ENST00000399649 CARMIL2Q6F5E8 1435 aa15.16■□□□□ 0.02
CACNA1C-219ENST00000399649 CCDC146Q8IYE0 955 aa15.16■□□□□ 0.02
CACNA1C-219ENST00000399649 RILPL2Q969X0 211 aa15.16■□□□□ 0.02
CACNA1C-219ENST00000399649 NGDNQ8NEJ9 315 aaKnown RBP15.15■□□□□ 0.02
CACNA1C-219ENST00000399649 CNKSR2Q8WXI2 1034 aa15.15■□□□□ 0.02
CACNA1C-219ENST00000399649 CUX2O14529 1486 aa15.14■□□□□ 0.01
CACNA1C-219ENST00000399649 EID1Q9Y6B2 187 aa15.14■□□□□ 0.01
CACNA1C-219ENST00000399649 HSP90AA2PQ14568 343 aaPredicted RBP15.14■□□□□ 0.01
CACNA1C-219ENST00000399649 TRIM29Q14134 588 aa15.14■□□□□ 0.01
CACNA1C-219ENST00000399649 CLUAP1Q96AJ1 413 aa15.14■□□□□ 0.01
CACNA1C-219ENST00000399649 RRP12Q5JTH9 1297 aaKnown RBP15.13■□□□□ 0.01
CACNA1C-219ENST00000399649 RAD21O60216 631 aa15.13■□□□□ 0.01
CACNA1C-219ENST00000399649 LRRFIP1Q32MZ4 808 aaKnown RBP15.13■□□□□ 0.01
CACNA1C-219ENST00000399649 LTV1Q96GA3 475 aaPredicted RBP15.13■□□□□ 0.01
CACNA1C-219ENST00000399649 CARMIL1Q5VZK9 1371 aa15.12■□□□□ 0.01
CACNA1C-219ENST00000399649 SKOR2Q2VWA4 1001 aaPredicted RBP15.12■□□□□ 0.01
CACNA1C-219ENST00000399649 MCTP1Q6DN14 999 aa15.12■□□□□ 0.01
CACNA1C-219ENST00000399649 ANKRD20A12PQ8NF67 263 aa15.12■□□□□ 0.01
CACNA1C-219ENST00000399649 ZNF771Q7L3S4 317 aaPredicted RBP15.12■□□□□ 0.01
CACNA1C-219ENST00000399649 IPO7O95373 1038 aaKnown RBP15.12■□□□□ 0.01
CACNA1C-219ENST00000399649 MYO15BQ96JP2 1530 aa15.11■□□□□ 0.01
CACNA1C-219ENST00000399649 ZNF592Q92610 1267 aa15.11■□□□□ 0.01
CACNA1C-219ENST00000399649 FOXD1Q16676 465 aa15.11■□□□□ 0.01
CACNA1C-219ENST00000399649 TEX35Q5T0J7 233 aa15.1■□□□□ 0.01
CACNA1C-219ENST00000399649 HOOK1Q9UJC3 728 aaKnown RBP15.1■□□□□ 0.01
CACNA1C-219ENST00000399649 C1orf141Q5JVX7 400 aa15.09■□□□□ 0.01
CACNA1C-219ENST00000399649 DDX49Q9Y6V7 483 aaKnown RBP15.09■□□□□ 0.01
CACNA1C-219ENST00000399649 BAZ1AQ9NRL2 1556 aaPredicted RBP15.09■□□□□ 0.01
CACNA1C-219ENST00000399649 CPLX2Q6PUV4 134 aaKnown RBP15.09■□□□□ 0.01
CACNA1C-219ENST00000399649 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.08■□□□□ 0
CACNA1C-219ENST00000399649 RSPH6AQ9H0K4 717 aa15.08■□□□□ 0
CACNA1C-219ENST00000399649 PDS5BQ9NTI5 1447 aa15.07■□□□□ 0
CACNA1C-219ENST00000399649 PHLDB1Q86UU1 1377 aa15.07■□□□□ 0
CACNA1C-219ENST00000399649 MSH5O43196 834 aa15.07■□□□□ 0
CACNA1C-219ENST00000399649 DIAPH3Q9NSV4 1193 aa15.07■□□□□ 0
CACNA1C-219ENST00000399649 CWC22Q9HCG8 908 aaKnown RBP15.07■□□□□ 0
CACNA1C-219ENST00000399649 FOXD4L6Q3SYB3 417 aaPredicted RBP15.07■□□□□ 0
CACNA1C-219ENST00000399649 ANKRD45Q5TZF3 282 aa15.07■□□□□ 0
CACNA1C-219ENST00000399649 FOXD4L3Q6VB84 417 aaPredicted RBP15.07■□□□□ 0
CACNA1C-219ENST00000399649 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.07■□□□□ 01e-7■■■■■ 115.4
CACNA1C-219ENST00000399649 PDE3BQ13370 1112 aa15.06■□□□□ 0
CACNA1C-219ENST00000399649 NUP155O75694 1391 aa15.06■□□□□ 0
CACNA1C-219ENST00000399649 RUFY2Q8WXA3 655 aa15.06■□□□□ 0
CACNA1C-219ENST00000399649 AK7Q96M32 723 aa15.06■□□□□ 0
CACNA1C-219ENST00000399649 ANKRD30AQ9BXX3 1397 aa15.06■□□□□ 0
CACNA1C-219ENST00000399649 CDR1P51861 262 aa15.06■□□□□ 0
CACNA1C-219ENST00000399649 DHX16O60231 1041 aaKnown RBP15.05■□□□□ 0
CACNA1C-219ENST00000399649 EVA1CP58658 441 aa15.05■□□□□ 0
CACNA1C-219ENST00000399649 RUFY1Q96T51 708 aa15.05■□□□□ 0
CACNA1C-219ENST00000399649 ANO2Q9NQ90 1003 aa15.05■□□□□ 0
CACNA1C-219ENST00000399649 CCDC43Q96MW1 224 aaKnown RBP15.05■□□□□ -0
CACNA1C-219ENST00000399649 MPHOSPH9Q99550 1183 aa15.05■□□□□ -0
CACNA1C-219ENST00000399649 HOMER1Q86YM7 354 aa15.04■□□□□ -0
CACNA1C-219ENST00000399649 FBXW7Q969H0 707 aa15.04■□□□□ -0
CACNA1C-219ENST00000399649 EFCAB2Q5VUJ9 269 aa15.03■□□□□ -0
CACNA1C-219ENST00000399649 CENPQQ7L2Z9 268 aaPredicted RBP15.03■□□□□ -0
CACNA1C-219ENST00000399649 APPP05067 770 aa15.02■□□□□ -0
CACNA1C-219ENST00000399649 NUTM2DQ5VT03 806 aaPredicted RBP15.02■□□□□ -0
CACNA1C-219ENST00000399649 ODF2Q5BJF6 829 aa15.02■□□□□ -0
CACNA1C-219ENST00000399649 NAP1L1P55209 391 aaKnown RBP15.02□□□□□ -0.01
CACNA1C-219ENST00000399649 NEXNQ0ZGT2 675 aa15.02□□□□□ -0.01
CACNA1C-219ENST00000399649 ERICH2A1L162 156 aa15.02□□□□□ -0.01
CACNA1C-219ENST00000399649 CPLX1O14810 134 aa15.02□□□□□ -0.01
CACNA1C-219ENST00000399649 VPS37DQ86XT2 251 aa15.02□□□□□ -0.01
CACNA1C-219ENST00000399649 CT47A1Q5JQC4 288 aaPredicted RBP15.01□□□□□ -0.01
CACNA1C-219ENST00000399649 TTC5Q8N0Z6 440 aa15.01□□□□□ -0.01
CACNA1C-219ENST00000399649 NFXL1Q6ZNB6 911 aa15.01□□□□□ -0.01
CACNA1C-219ENST00000399649 ZKSCAN1P17029 563 aaPredicted RBP15.01□□□□□ -0.01
CACNA1C-219ENST00000399649 FAM161AQ3B820 660 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms