RNA–Protein interactions for RNA: ENST00000399595.5

CACNA1C-206, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-206ENST00000399595 CC2D1BQ5T0F9 858 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-206ENST00000399595 NUTM2DQ5VT03 806 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-206ENST00000399595 MORC1Q86VD1 984 aa13.9□□□□□ -0.18
CACNA1C-206ENST00000399595 CFAP44Q96MT7 982 aa13.9□□□□□ -0.18
CACNA1C-206ENST00000399595 PCMTD1Q96MG8 357 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-206ENST00000399595 FAM13BQ9NYF5 915 aa13.9□□□□□ -0.18
CACNA1C-206ENST00000399595 PIP4K2BP78356 416 aa13.9□□□□□ -0.19
CACNA1C-206ENST00000399595 ATF3P18847 181 aa13.89□□□□□ -0.19
CACNA1C-206ENST00000399595 WASHC2CQ9Y4E1 1318 aa13.89□□□□□ -0.19
CACNA1C-206ENST00000399595 EFCAB2Q5VUJ9 269 aa13.89□□□□□ -0.19
CACNA1C-206ENST00000399595 CSPP1Q1MSJ5 1256 aa13.88□□□□□ -0.19
CACNA1C-206ENST00000399595 CCDC70Q6NSX1 233 aa13.88□□□□□ -0.19
CACNA1C-206ENST00000399595 FOXD4L6Q3SYB3 417 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-206ENST00000399595 FOXD4L3Q6VB84 417 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-206ENST00000399595 PHF14O94880 888 aa13.88□□□□□ -0.19
CACNA1C-206ENST00000399595 NOL10Q9BSC4 688 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-206ENST00000399595 KIAA1211Q6ZU35 1233 aa13.87□□□□□ -0.19
CACNA1C-206ENST00000399595 CCAR1Q8IX12 1150 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-206ENST00000399595 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
CACNA1C-206ENST00000399595 TMF1P82094 1093 aa13.86□□□□□ -0.19
CACNA1C-206ENST00000399595 SPAG9O60271 1321 aaKnown RBP13.86□□□□□ -0.19
CACNA1C-206ENST00000399595 PAF1Q8N7H5 531 aa13.85□□□□□ -0.19
CACNA1C-206ENST00000399595 IPO9Q96P70 1041 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-206ENST00000399595 NUTM2BA6NNL0 878 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-206ENST00000399595 NUTM2EB1AL46 878 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-206ENST00000399595 KIF3BO15066 747 aa13.85□□□□□ -0.19
CACNA1C-206ENST00000399595 RDXP35241 583 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-206ENST00000399595 NUTM2AQ8IVF1 878 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-206ENST00000399595 DCAF11Q8TEB1 546 aa13.85□□□□□ -0.19
CACNA1C-206ENST00000399595 FAM69CQ0P6D2 419 aa13.84□□□□□ -0.19
CACNA1C-206ENST00000399595 BCCIPQ9P287 314 aaKnown RBP eCLIP13.84□□□□□ -0.19
CACNA1C-206ENST00000399595 PPM1FP49593 454 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-206ENST00000399595 CHMP4AQ9BY43 222 aa13.83□□□□□ -0.2
CACNA1C-206ENST00000399595 HSP90AB3PQ58FF7 597 aa13.83□□□□□ -0.2
CACNA1C-206ENST00000399595 MFAP1P55081 439 aaKnown RBP13.82□□□□□ -0.2
CACNA1C-206ENST00000399595 STK11IPQ8N1F8 1099 aa13.82□□□□□ -0.2
CACNA1C-206ENST00000399595 WDR70Q9NW82 654 aa13.82□□□□□ -0.2
CACNA1C-206ENST00000399595 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
CACNA1C-206ENST00000399595 PDS5BQ9NTI5 1447 aa13.81□□□□□ -0.2
CACNA1C-206ENST00000399595 CCDC97Q96F63 343 aaPredicted RBP13.81□□□□□ -0.2
CACNA1C-206ENST00000399595 ZFYVE27Q5T4F4 411 aa13.81□□□□□ -0.2
CACNA1C-206ENST00000399595 C1orf141Q5JVX7 400 aa13.81□□□□□ -0.2
CACNA1C-206ENST00000399595 WASHC2AQ641Q2 1341 aa13.81□□□□□ -0.2
CACNA1C-206ENST00000399595 NAP1L1P55209 391 aaKnown RBP13.8□□□□□ -0.2
CACNA1C-206ENST00000399595 AMOTL1Q8IY63 956 aa13.8□□□□□ -0.2
CACNA1C-206ENST00000399595 CCDC34Q96HJ3 373 aa13.8□□□□□ -0.2
CACNA1C-206ENST00000399595 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
CACNA1C-206ENST00000399595 CCDC191Q8NCU4 936 aa13.8□□□□□ -0.2
CACNA1C-206ENST00000399595 TSR1Q2NL82 804 aaKnown RBP13.8□□□□□ -0.2
CACNA1C-206ENST00000399595 STK31Q9BXU1 1019 aa13.8□□□□□ -0.2
CACNA1C-206ENST00000399595 PSME1Q06323 249 aa13.79□□□□□ -0.2
CACNA1C-206ENST00000399595 DDX11L8A8MPP1 907 aa13.79□□□□□ -0.2
CACNA1C-206ENST00000399595 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
CACNA1C-206ENST00000399595 PAXIP1Q6ZW49 1069 aaPredicted RBP13.79□□□□□ -0.2
CACNA1C-206ENST00000399595 TSHZ2Q9NRE2 1034 aa13.78□□□□□ -0.2
CACNA1C-206ENST00000399595 HMMRO75330 724 aa13.78□□□□□ -0.2
CACNA1C-206ENST00000399595 RBM33Q96EV2 1170 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-206ENST00000399595 GSE1Q14687 1217 aa13.78□□□□□ -0.2
CACNA1C-206ENST00000399595 CWC15Q9P013 229 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-206ENST00000399595 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.2
CACNA1C-206ENST00000399595 RUFY1Q96T51 708 aa13.77□□□□□ -0.21
CACNA1C-206ENST00000399595 H0YHG0 523 aa13.77□□□□□ -0.21
CACNA1C-206ENST00000399595 TTC5Q8N0Z6 440 aa13.76□□□□□ -0.21
CACNA1C-206ENST00000399595 HSP90AB2PQ58FF8 381 aa13.76□□□□□ -0.21
CACNA1C-206ENST00000399595 VPS37DQ86XT2 251 aa13.76□□□□□ -0.21
CACNA1C-206ENST00000399595 ANKRD62A6NC57 917 aa13.76□□□□□ -0.21
CACNA1C-206ENST00000399595 GOLGA6L19H0YKK7 550 aa13.76□□□□□ -0.21
CACNA1C-206ENST00000399595 TCERG1O14776 1098 aaKnown RBP13.76□□□□□ -0.21
CACNA1C-206ENST00000399595 TPM2P07951 284 aa13.75□□□□□ -0.21
CACNA1C-206ENST00000399595 SF3A1Q15459 793 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-206ENST00000399595 ODF2Q5BJF6 829 aa13.75□□□□□ -0.21
CACNA1C-206ENST00000399595 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.75□□□□□ -0.21
CACNA1C-206ENST00000399595 GPATCH3Q96I76 525 aa13.75□□□□□ -0.21
CACNA1C-206ENST00000399595 CT47A1Q5JQC4 288 aaPredicted RBP13.74□□□□□ -0.21
CACNA1C-206ENST00000399595 NGEFQ8N5V2 710 aa13.74□□□□□ -0.21
CACNA1C-206ENST00000399595 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.74□□□□□ -0.21
CACNA1C-206ENST00000399595 HOMER1Q86YM7 354 aa13.74□□□□□ -0.21
CACNA1C-206ENST00000399595 FOSBP53539 338 aa13.73□□□□□ -0.21
CACNA1C-206ENST00000399595 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
CACNA1C-206ENST00000399595 TPM1P09493 284 aa13.73□□□□□ -0.21
CACNA1C-206ENST00000399595 CCDC66A2RUB6 948 aa13.73□□□□□ -0.21
CACNA1C-206ENST00000399595 KDM4AO75164 1064 aa13.73□□□□□ -0.21
CACNA1C-206ENST00000399595 TERF2IPQ9NYB0 399 aa13.72□□□□□ -0.21
CACNA1C-206ENST00000399595 CDR1P51861 262 aa13.72□□□□□ -0.21
CACNA1C-206ENST00000399595 KIF16BQ96L93 1317 aa13.72□□□□□ -0.21
CACNA1C-206ENST00000399595 IBSPP21815 317 aaPredicted RBP13.72□□□□□ -0.21
CACNA1C-206ENST00000399595 ACBD3Q9H3P7 528 aa13.72□□□□□ -0.21
CACNA1C-206ENST00000399595 TTLL5Q6EMB2 1281 aa13.72□□□□□ -0.21
CACNA1C-206ENST00000399595 ARGLU1Q9NWB6 273 aaPredicted RBP13.71□□□□□ -0.22
CACNA1C-206ENST00000399595 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
CACNA1C-206ENST00000399595 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
CACNA1C-206ENST00000399595 RWDD1Q9H446 243 aaPredicted RBP13.69□□□□□ -0.22
CACNA1C-206ENST00000399595 BECN2A8MW95 431 aa13.69□□□□□ -0.22
CACNA1C-206ENST00000399595 DHX16O60231 1041 aaKnown RBP13.69□□□□□ -0.22
CACNA1C-206ENST00000399595 DCTN1Q14203 1278 aa13.69□□□□□ -0.22
CACNA1C-206ENST00000399595 ITPRIPQ8IWB1 547 aa13.69□□□□□ -0.22
CACNA1C-206ENST00000399595 WRNQ14191 1432 aaPredicted RBP eCLIP13.69□□□□□ -0.22
CACNA1C-206ENST00000399595 H3BQV1 296 aa13.69□□□□□ -0.22
CACNA1C-206ENST00000399595 IFFO2Q5TF58 517 aa13.69□□□□□ -0.22
CACNA1C-206ENST00000399595 DDX49Q9Y6V7 483 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms