RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ARAP1Q96P48 1450 aa8.63□□□□□ -1.03
TRAPPC13-202ENST00000399438 TEX2Q8IWB9 1127 aa8.63□□□□□ -1.03
TRAPPC13-202ENST00000399438 GRIN2AQ12879 1464 aa8.62□□□□□ -1.03
TRAPPC13-202ENST00000399438 SERPINA10Q9UK55 444 aa8.62□□□□□ -1.03
TRAPPC13-202ENST00000399438 CHD1O14646 1710 aa8.62□□□□□ -1.03
TRAPPC13-202ENST00000399438 CANXP27824 592 aaKnown RBP8.61□□□□□ -1.03
TRAPPC13-202ENST00000399438 CADPS2Q86UW7 1296 aa8.61□□□□□ -1.03
TRAPPC13-202ENST00000399438 POLA2Q14181 598 aa8.61□□□□□ -1.03
TRAPPC13-202ENST00000399438 FAM117AQ9C073 453 aa8.61□□□□□ -1.03
TRAPPC13-202ENST00000399438 SPATA32Q96LK8 384 aa8.61□□□□□ -1.03
TRAPPC13-202ENST00000399438 CIZ1Q9ULV3 898 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC13-202ENST00000399438 CTTNBP2Q8WZ74 1663 aa8.59□□□□□ -1.03
TRAPPC13-202ENST00000399438 CEP170Q5SW79 1584 aa8.58□□□□□ -1.04
TRAPPC13-202ENST00000399438 PLEKHG3A1L390 1219 aa8.58□□□□□ -1.04
TRAPPC13-202ENST00000399438 NUP160Q12769 1436 aa8.58□□□□□ -1.04
TRAPPC13-202ENST00000399438 FNBP4Q8N3X1 1017 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC13-202ENST00000399438 NAP1L5Q96NT1 182 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC13-202ENST00000399438 LOC102724159A0A0B4J2E5 919 aa8.58□□□□□ -1.04
TRAPPC13-202ENST00000399438 PWP2Q15269 919 aaKnown RBP8.58□□□□□ -1.04
TRAPPC13-202ENST00000399438 CHMP7Q8WUX9 453 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC13-202ENST00000399438 SIN3AQ96ST3 1273 aa8.57□□□□□ -1.04
TRAPPC13-202ENST00000399438 CCDC97Q96F63 343 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC13-202ENST00000399438 PDE4DQ08499 809 aa8.56□□□□□ -1.04
TRAPPC13-202ENST00000399438 CENPBP07199 599 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC13-202ENST00000399438 HOXD11P31277 338 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC13-202ENST00000399438 ANKRD13AQ8IZ07 590 aa8.55□□□□□ -1.04
TRAPPC13-202ENST00000399438 ARHGEF1Q92888 912 aaKnown RBP8.55□□□□□ -1.04
TRAPPC13-202ENST00000399438 KCNH8Q96L42 1107 aa8.55□□□□□ -1.04
TRAPPC13-202ENST00000399438 ZNF219Q9P2Y4 722 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC13-202ENST00000399438 RIPOR2Q9Y4F9 1068 aa8.55□□□□□ -1.04
TRAPPC13-202ENST00000399438 PRDM10Q9NQV6 1147 aa8.54□□□□□ -1.04
TRAPPC13-202ENST00000399438 KIAA0586Q9BVV6 1533 aa8.54□□□□□ -1.04
TRAPPC13-202ENST00000399438 ZC3H4Q9UPT8 1303 aaKnown RBP8.54□□□□□ -1.04
TRAPPC13-202ENST00000399438 IQGAP2Q13576 1575 aa8.54□□□□□ -1.04
TRAPPC13-202ENST00000399438 CLASP1Q7Z460 1538 aa8.54□□□□□ -1.04
TRAPPC13-202ENST00000399438 ARHGAP35Q9NRY4 1499 aa8.54□□□□□ -1.04
TRAPPC13-202ENST00000399438 TRIM66O15016 1216 aa8.54□□□□□ -1.04
TRAPPC13-202ENST00000399438 BRD1O95696 1058 aa8.54□□□□□ -1.04
TRAPPC13-202ENST00000399438 PROSER2Q86WR7 435 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC13-202ENST00000399438 DHX57Q6P158 1386 aaKnown RBP8.53□□□□□ -1.04
TRAPPC13-202ENST00000399438 FHOD3Q2V2M9 1422 aa8.53□□□□□ -1.04
TRAPPC13-202ENST00000399438 AAMPQ13685 434 aa8.52□□□□□ -1.04
TRAPPC13-202ENST00000399438 NCLP19338 710 aaKnown RBP8.52□□□□□ -1.05
TRAPPC13-202ENST00000399438 PLEKHD1A6NEE1 506 aa8.51□□□□□ -1.05
TRAPPC13-202ENST00000399438 EXOC8Q8IYI6 725 aa8.51□□□□□ -1.05
TRAPPC13-202ENST00000399438 SHROOM2Q13796 1616 aa8.51□□□□□ -1.05
TRAPPC13-202ENST00000399438 UGGT2Q9NYU1 1516 aa8.51□□□□□ -1.05
TRAPPC13-202ENST00000399438 MCM6Q14566 821 aa8.5□□□□□ -1.05
TRAPPC13-202ENST00000399438 SIRT1Q96EB6 747 aa8.5□□□□□ -1.05
TRAPPC13-202ENST00000399438 CCNB3Q8WWL7 1395 aa8.5□□□□□ -1.05
TRAPPC13-202ENST00000399438 MAFGO15525 162 aa8.5□□□□□ -1.05
TRAPPC13-202ENST00000399438 SETQ01105 290 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC13-202ENST00000399438 SAMD9Q5K651 1589 aa8.5□□□□□ -1.05
TRAPPC13-202ENST00000399438 PLSCR2Q9NRY7 297 aa8.5□□□□□ -1.05
TRAPPC13-202ENST00000399438 KIAA1522Q9P206 1035 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC13-202ENST00000399438 CHIC2Q9UKJ5 165 aa8.5□□□□□ -1.05
TRAPPC13-202ENST00000399438 KCNA1Q09470 495 aa8.49□□□□□ -1.05
TRAPPC13-202ENST00000399438 NOL8Q76FK4 1167 aaKnown RBP8.49□□□□□ -1.05
TRAPPC13-202ENST00000399438 PHLDB1Q86UU1 1377 aa8.49□□□□□ -1.05
TRAPPC13-202ENST00000399438 EFCAB5A4FU69 1503 aa8.49□□□□□ -1.05
TRAPPC13-202ENST00000399438 PLCD4Q9BRC7 762 aa8.48□□□□□ -1.05
TRAPPC13-202ENST00000399438 CNGB1Q14028 1251 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC13-202ENST00000399438 POM121Q96HA1 1249 aa8.48□□□□□ -1.05
TRAPPC13-202ENST00000399438 PATL2C9JE40 543 aaKnown RBP8.48□□□□□ -1.05
TRAPPC13-202ENST00000399438 RAB3GAP2Q9H2M9 1393 aa8.48□□□□□ -1.05
TRAPPC13-202ENST00000399438 MARCH6O60337 910 aa8.47□□□□□ -1.05
TRAPPC13-202ENST00000399438 OSCARQ8IYS5 282 aa8.47□□□□□ -1.05
TRAPPC13-202ENST00000399438 DISP1Q96F81 1524 aa8.47□□□□□ -1.05
TRAPPC13-202ENST00000399438 KIAA0556O60303 1618 aa8.47□□□□□ -1.05
TRAPPC13-202ENST00000399438 DDX10Q13206 875 aaKnown RBP8.46□□□□□ -1.06
TRAPPC13-202ENST00000399438 RBM47A0AV96 593 aaKnown RBP8.46□□□□□ -1.06
TRAPPC13-202ENST00000399438 STK25O00506 426 aa8.46□□□□□ -1.06
TRAPPC13-202ENST00000399438 ANAPC15P60006 121 aa8.46□□□□□ -1.06
TRAPPC13-202ENST00000399438 JPH4Q96JJ6 628 aa8.44□□□□□ -1.06
TRAPPC13-202ENST00000399438 PLCD3Q8N3E9 789 aa8.44□□□□□ -1.06
TRAPPC13-202ENST00000399438 DRC1Q96MC2 740 aa8.44□□□□□ -1.06
TRAPPC13-202ENST00000399438 RRP7BPQ9NSQ0 103 aa8.44□□□□□ -1.06
TRAPPC13-202ENST00000399438 PRG4Q92954 1404 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC13-202ENST00000399438 SND1Q7KZF4 910 aaKnown RBP eCLIP8.43□□□□□ -1.06
TRAPPC13-202ENST00000399438 CNPY4Q8N129 248 aa8.43□□□□□ -1.06
TRAPPC13-202ENST00000399438 PPME1Q9Y570 386 aa8.43□□□□□ -1.06
TRAPPC13-202ENST00000399438 SLC52A1Q9NWF4 448 aa8.43□□□□□ -1.06
TRAPPC13-202ENST00000399438 ERCC6L2Q5T890 1561 aa8.43□□□□□ -1.06
TRAPPC13-202ENST00000399438 ANKRD62A6NC57 917 aa8.42□□□□□ -1.06
TRAPPC13-202ENST00000399438 MYT1LQ9UL68 1186 aa8.42□□□□□ -1.06
TRAPPC13-202ENST00000399438 SUGT1Q9Y2Z0 365 aa8.42□□□□□ -1.06
TRAPPC13-202ENST00000399438 RIOK3O14730 519 aaKnown RBP8.42□□□□□ -1.06
TRAPPC13-202ENST00000399438 HSP90AB4PQ58FF6 505 aa8.42□□□□□ -1.06
TRAPPC13-202ENST00000399438 CARMIL2Q6F5E8 1435 aa8.42□□□□□ -1.06
TRAPPC13-202ENST00000399438 KRI1Q8N9T8 703 aaKnown RBP8.42□□□□□ -1.06
TRAPPC13-202ENST00000399438 SENP3-EIF4A1A0A087X0R7 540 aa8.41□□□□□ -1.06
TRAPPC13-202ENST00000399438 PPP1R15AO75807 674 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC13-202ENST00000399438 SGSM3Q96HU1 749 aa8.4□□□□□ -1.06
TRAPPC13-202ENST00000399438 DDRGK1Q96HY6 314 aa8.4□□□□□ -1.07
TRAPPC13-202ENST00000399438 RYDENQ9NUL5 291 aaKnown RBP8.4□□□□□ -1.07
TRAPPC13-202ENST00000399438 ZNF662Q6ZS27 426 aa8.39□□□□□ -1.07
TRAPPC13-202ENST00000399438 SREK1Q8WXA9 508 aaKnown RBP8.39□□□□□ -1.07
TRAPPC13-202ENST00000399438 RRBP1Q9P2E9 1410 aaKnown RBP8.39□□□□□ -1.07
TRAPPC13-202ENST00000399438 TRIM52Q96A61 297 aa8.39□□□□□ -1.07
TRAPPC13-202ENST00000399438 MRRFQ96E11 262 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms