RNA–Protein interactions for RNA: ENST00000399100.6

SEC24B-202, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEC24B, Length 3,780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-202ENST00000399100 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
SEC24B-202ENST00000399100 CFDP1Q9UEE9 299 aaPredicted RBP18.44■□□□□ 0.54
SEC24B-202ENST00000399100 CCDC184Q52MB2 194 aa18.44■□□□□ 0.54
SEC24B-202ENST00000399100 PRKRIP1Q9H875 184 aaPredicted RBP18.44■□□□□ 0.54
SEC24B-202ENST00000399100 MYOM1P52179 1685 aa18.43■□□□□ 0.54
SEC24B-202ENST00000399100 ZFYVE16Q7Z3T8 1539 aa18.43■□□□□ 0.54
SEC24B-202ENST00000399100 ERBINQ96RT1 1412 aa18.43■□□□□ 0.54
SEC24B-202ENST00000399100 PRAG1Q86YV5 1406 aa18.42■□□□□ 0.54
SEC24B-202ENST00000399100 ZMYM4Q5VZL5 1548 aa18.42■□□□□ 0.54
SEC24B-202ENST00000399100 A2MP01023 1474 aa18.41■□□□□ 0.54
SEC24B-202ENST00000399100 PLEKHH2Q8IVE3 1493 aa18.41■□□□□ 0.54
SEC24B-202ENST00000399100 KIF15Q9NS87 1388 aa18.4■□□□□ 0.54
SEC24B-202ENST00000399100 TET3O43151 1660 aa18.39■□□□□ 0.53
SEC24B-202ENST00000399100 USP47Q96K76 1375 aa18.38■□□□□ 0.53
SEC24B-202ENST00000399100 TRPM2O94759 1503 aa18.38■□□□□ 0.53
SEC24B-202ENST00000399100 LRPPRCP42704 1394 aaKnown RBP18.37■□□□□ 0.53
SEC24B-202ENST00000399100 PLCH2O75038 1416 aa18.37■□□□□ 0.53
SEC24B-202ENST00000399100 SLC4A1APQ9BWU0 796 aaKnown RBP18.37■□□□□ 0.53
SEC24B-202ENST00000399100 RNF123Q5XPI4 1314 aa18.37■□□□□ 0.53
SEC24B-202ENST00000399100 TRIM52Q96A61 297 aa18.36■□□□□ 0.53
SEC24B-202ENST00000399100 FBLN2P98095 1184 aa18.35■□□□□ 0.53
SEC24B-202ENST00000399100 ARHGAP5Q13017 1502 aa18.34■□□□□ 0.53
SEC24B-202ENST00000399100 MYO3AQ8NEV4 1616 aa18.34■□□□□ 0.53
SEC24B-202ENST00000399100 COL17A1Q9UMD9 1497 aaPredicted RBP18.34■□□□□ 0.53
SEC24B-202ENST00000399100 CLTCL1P53675 1640 aa18.33■□□□□ 0.53
SEC24B-202ENST00000399100 WDR7Q9Y4E6 1490 aa18.33■□□□□ 0.52
SEC24B-202ENST00000399100 ZBED9Q6R2W3 1325 aa18.32■□□□□ 0.52
SEC24B-202ENST00000399100 PTPRTO14522 1441 aa18.32■□□□□ 0.52
SEC24B-202ENST00000399100 ZC3H13Q5T200 1668 aaKnown RBP18.32■□□□□ 0.52
SEC24B-202ENST00000399100 RTEL1-TNFRSF6BF6WH68 1400 aa18.32■□□□□ 0.52
SEC24B-202ENST00000399100 RSPH4AQ5TD94 716 aa18.31■□□□□ 0.52
SEC24B-202ENST00000399100 PKD2Q13563 968 aa18.31■□□□□ 0.52
SEC24B-202ENST00000399100 INSRP06213 1382 aa18.3■□□□□ 0.52
SEC24B-202ENST00000399100 SMG6Q86US8 1419 aaKnown RBP18.29■□□□□ 0.52
SEC24B-202ENST00000399100 PLEKHD1A6NEE1 506 aa18.29■□□□□ 0.52
SEC24B-202ENST00000399100 ROCK2O75116 1388 aaKnown RBP18.29■□□□□ 0.52
SEC24B-202ENST00000399100 NUP155O75694 1391 aa18.29■□□□□ 0.52
SEC24B-202ENST00000399100 KTN1Q86UP2 1357 aaKnown RBP18.28■□□□□ 0.52
SEC24B-202ENST00000399100 ERICH6BQ5W0A0 696 aa18.28■□□□□ 0.52
SEC24B-202ENST00000399100 KIDINS220Q9ULH0 1771 aa18.28■□□□□ 0.52
SEC24B-202ENST00000399100 MROH2AA6NES4 1674 aa18.26■□□□□ 0.51
SEC24B-202ENST00000399100 FKBP8Q14318 412 aa18.24■□□□□ 0.51
SEC24B-202ENST00000399100 LMTK2Q8IWU2 1503 aa18.24■□□□□ 0.51
SEC24B-202ENST00000399100 PARD3Q8TEW0 1356 aa18.24■□□□□ 0.51
SEC24B-202ENST00000399100 NRXN1Q9ULB1 1477 aa18.23■□□□□ 0.51
SEC24B-202ENST00000399100 SYNMO15061 1565 aa18.23■□□□□ 0.51
SEC24B-202ENST00000399100 POLR3GLQ9BT43 218 aa18.21■□□□□ 0.51
SEC24B-202ENST00000399100 TRAPPC8Q9Y2L5 1435 aa18.21■□□□□ 0.51
SEC24B-202ENST00000399100 HNRNPMP52272 730 aaKnown RBP eCLIP18.21■□□□□ 0.513e-6■■■■□ 21.2
SEC24B-202ENST00000399100 SCAPERQ9BY12 1400 aa18.2■□□□□ 0.5
SEC24B-202ENST00000399100 PPRC1Q5VV67 1664 aaKnown RBP18.19■□□□□ 0.5
SEC24B-202ENST00000399100 ATP7AQ04656 1500 aa18.19■□□□□ 0.5
SEC24B-202ENST00000399100 ABCA6Q8N139 1617 aa18.18■□□□□ 0.5
SEC24B-202ENST00000399100 MAP3K4Q9Y6R4 1608 aa18.18■□□□□ 0.5
SEC24B-202ENST00000399100 PPLO60437 1756 aa18.18■□□□□ 0.5
SEC24B-202ENST00000399100 FRMPD1Q5SYB0 1578 aa18.17■□□□□ 0.5
SEC24B-202ENST00000399100 BLMP54132 1417 aaPredicted RBP18.17■□□□□ 0.5
SEC24B-202ENST00000399100 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
SEC24B-202ENST00000399100 EFCAB6Q5THR3 1501 aa18.16■□□□□ 0.5
SEC24B-202ENST00000399100 KIF1BO60333 1816 aa18.15■□□□□ 0.5
SEC24B-202ENST00000399100 TESK2Q96S53 571 aa18.15■□□□□ 0.5
SEC24B-202ENST00000399100 PIK3C2BO00750 1634 aa18.15■□□□□ 0.5
SEC24B-202ENST00000399100 PNISRQ8TF01 805 aaKnown RBP18.15■□□□□ 0.5
SEC24B-202ENST00000399100 MYOM2P54296 1465 aa18.14■□□□□ 0.5
SEC24B-202ENST00000399100 BRD4O60885 1362 aaPredicted RBP18.14■□□□□ 0.49
SEC24B-202ENST00000399100 CCDC144AA2RUR9 1427 aa18.14■□□□□ 0.49
SEC24B-202ENST00000399100 SETBP1Q9Y6X0 1596 aa18.12■□□□□ 0.49
SEC24B-202ENST00000399100 HNRNPUQ00839 825 aaKnown RBP eCLIP18.11■□□□□ 0.49
SEC24B-202ENST00000399100 ZNF518AQ6AHZ1 1483 aa18.11■□□□□ 0.49
SEC24B-202ENST00000399100 SIGLEC1Q9BZZ2 1709 aa18.11■□□□□ 0.49
SEC24B-202ENST00000399100 CFAP74Q9C0B2 1584 aa18.11■□□□□ 0.49
SEC24B-202ENST00000399100 ADGRB3O60242 1522 aa18.1■□□□□ 0.49
SEC24B-202ENST00000399100 USP32Q8NFA0 1604 aa18.09■□□□□ 0.49
SEC24B-202ENST00000399100 ZNF777Q9ULD5 760 aaPredicted RBP18.09■□□□□ 0.49
SEC24B-202ENST00000399100 KDM5AP29375 1690 aaKnown RBP18.09■□□□□ 0.49
SEC24B-202ENST00000399100 DISP3Q9P2K9 1392 aa18.09■□□□□ 0.49
SEC24B-202ENST00000399100 TSPY4P0CV99 314 aa18.08■□□□□ 0.48
SEC24B-202ENST00000399100 TSPY10P0CW01 314 aa18.08■□□□□ 0.48
SEC24B-202ENST00000399100 HECW2Q9P2P5 1572 aa18.07■□□□□ 0.48
SEC24B-202ENST00000399100 SHPRHQ149N8 1683 aa18.06■□□□□ 0.48
SEC24B-202ENST00000399100 WASHC2CQ9Y4E1 1318 aa18.05■□□□□ 0.48
SEC24B-202ENST00000399100 ST20-MTHFSA0A0A6YYL1 179 aa18.04■□□□□ 0.48
SEC24B-202ENST00000399100 BCL11AQ9H165 835 aa18.04■□□□□ 0.48
SEC24B-202ENST00000399100 RBM19Q9Y4C8 960 aaKnown RBP18.04■□□□□ 0.48
SEC24B-202ENST00000399100 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
SEC24B-202ENST00000399100 RICTORQ6R327 1708 aa18.02■□□□□ 0.48
SEC24B-202ENST00000399100 MYBBP1AQ9BQG0 1328 aaKnown RBP18.01■□□□□ 0.47
SEC24B-202ENST00000399100 MYT1LQ9UL68 1186 aa18.01■□□□□ 0.47
SEC24B-202ENST00000399100 FANCIQ9NVI1 1328 aa18.01■□□□□ 0.47
SEC24B-202ENST00000399100 ADGRB1O14514 1584 aa18.01■□□□□ 0.47
SEC24B-202ENST00000399100 FANCAO15360 1455 aa18■□□□□ 0.47
SEC24B-202ENST00000399100 RALBP1Q15311 655 aa17.99■□□□□ 0.47
SEC24B-202ENST00000399100 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
SEC24B-202ENST00000399100 CAMSAP1Q5T5Y3 1602 aa17.99■□□□□ 0.47
SEC24B-202ENST00000399100 NBPF1Q3BBV0 1214 aa17.98■□□□□ 0.47
SEC24B-202ENST00000399100 SCAF11Q99590 1463 aaKnown RBP17.98■□□□□ 0.47
SEC24B-202ENST00000399100 PPP4R2Q9NY27 417 aa17.98■□□□□ 0.47
SEC24B-202ENST00000399100 NPC1L1Q9UHC9 1359 aa17.98■□□□□ 0.47
SEC24B-202ENST00000399100 BCANQ96GW7 911 aa17.97■□□□□ 0.47
SEC24B-202ENST00000399100 UGGT1Q9NYU2 1555 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms