RNA–Protein interactions for RNA: ENST00000398888.6

USP19-202, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP19, Length 4,559 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-202ENST00000398888 NEUROD2Q15784 382 aa16.4■□□□□ 0.22
USP19-202ENST00000398888 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
USP19-202ENST00000398888 IGF1RP08069 1367 aa16.4■□□□□ 0.22
USP19-202ENST00000398888 CCDC173Q0VFZ6 552 aa16.4■□□□□ 0.22
USP19-202ENST00000398888 RALBP1Q15311 655 aa16.39■□□□□ 0.21
USP19-202ENST00000398888 CDCA8Q53HL2 280 aa16.39■□□□□ 0.21
USP19-202ENST00000398888 UACAQ9BZF9 1416 aa16.39■□□□□ 0.21
USP19-202ENST00000398888 CBX1P83916 185 aa16.38■□□□□ 0.21
USP19-202ENST00000398888 RRP1P56182 461 aaKnown RBP16.38■□□□□ 0.21
USP19-202ENST00000398888 FOXD1Q16676 465 aa16.38■□□□□ 0.21
USP19-202ENST00000398888 GRPEL1Q9HAV7 217 aa16.38■□□□□ 0.21
USP19-202ENST00000398888 CCDC39Q9UFE4 941 aa16.37■□□□□ 0.21
USP19-202ENST00000398888 CADPSQ9ULU8 1353 aa16.37■□□□□ 0.21
USP19-202ENST00000398888 ROCK2O75116 1388 aaKnown RBP16.37■□□□□ 0.21
USP19-202ENST00000398888 KNSTRNQ9Y448 316 aa16.37■□□□□ 0.21
USP19-202ENST00000398888 FGD1P98174 961 aa16.36■□□□□ 0.21
USP19-202ENST00000398888 RWDD1Q9H446 243 aaPredicted RBP16.36■□□□□ 0.21
USP19-202ENST00000398888 ISY1Q9ULR0 285 aaKnown RBP16.36■□□□□ 0.21
USP19-202ENST00000398888 POGKQ9P215 609 aa16.35■□□□□ 0.21
USP19-202ENST00000398888 PDE3BQ13370 1112 aa16.35■□□□□ 0.21
USP19-202ENST00000398888 RGL3Q3MIN7 710 aa16.35■□□□□ 0.21
USP19-202ENST00000398888 FGD6Q6ZV73 1430 aa16.35■□□□□ 0.21
USP19-202ENST00000398888 TSPYL1Q9H0U9 437 aa16.35■□□□□ 0.21
USP19-202ENST00000398888 NOC3LQ8WTT2 800 aaKnown RBP16.34■□□□□ 0.21
USP19-202ENST00000398888 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
USP19-202ENST00000398888 BACH2Q9BYV9 841 aa16.33■□□□□ 0.21
USP19-202ENST00000398888 CLCN1P35523 988 aa16.33■□□□□ 0.2
USP19-202ENST00000398888 ZSCAN30Q86W11 494 aa16.33■□□□□ 0.2
USP19-202ENST00000398888 KTN1Q86UP2 1357 aaKnown RBP16.33■□□□□ 0.2
USP19-202ENST00000398888 DEF6Q9H4E7 631 aa16.33■□□□□ 0.2
USP19-202ENST00000398888 ERICH4A6NGS2 130 aa16.32■□□□□ 0.2
USP19-202ENST00000398888 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
USP19-202ENST00000398888 EIF4G1Q04637 1599 aaKnown RBP16.32■□□□□ 0.2
USP19-202ENST00000398888 MAPK8IP3Q9UPT6 1336 aa16.32■□□□□ 0.2
USP19-202ENST00000398888 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
USP19-202ENST00000398888 PKD2Q13563 968 aa16.32■□□□□ 0.2
USP19-202ENST00000398888 CFAP44Q96MT7 982 aa16.32■□□□□ 0.2
USP19-202ENST00000398888 PMFBP1Q8TBY8 1022 aa16.31■□□□□ 0.2
USP19-202ENST00000398888 DCAF11Q8TEB1 546 aa16.31■□□□□ 0.2
USP19-202ENST00000398888 PLIN1O60240 522 aa16.31■□□□□ 0.2
USP19-202ENST00000398888 KCNJ4P48050 445 aa16.31■□□□□ 0.2
USP19-202ENST00000398888 CNTLNQ9NXG0 1405 aa16.31■□□□□ 0.2
USP19-202ENST00000398888 GNL2Q13823 731 aaKnown RBP16.3■□□□□ 0.2
USP19-202ENST00000398888 FOXD4L5Q5VV16 416 aaPredicted RBP16.3■□□□□ 0.2
USP19-202ENST00000398888 FOXD4L4Q8WXT5 416 aaPredicted RBP16.3■□□□□ 0.2
USP19-202ENST00000398888 MCCP23508 829 aa16.29■□□□□ 0.2
USP19-202ENST00000398888 CC2D1BQ5T0F9 858 aaKnown RBP16.29■□□□□ 0.2
USP19-202ENST00000398888 CRBNQ96SW2 442 aa16.29■□□□□ 0.2
USP19-202ENST00000398888 PDCL2Q8N4E4 241 aa16.29■□□□□ 0.2
USP19-202ENST00000398888 CCDC7Q96M83 1385 aa16.29■□□□□ 0.2
USP19-202ENST00000398888 TMF1P82094 1093 aa16.28■□□□□ 0.2
USP19-202ENST00000398888 CCAR2Q8N163 923 aaKnown RBP16.28■□□□□ 0.2
USP19-202ENST00000398888 ARGLU1Q9NWB6 273 aaPredicted RBP16.28■□□□□ 0.2
USP19-202ENST00000398888 WDR97A6NE52 1622 aa16.28■□□□□ 0.2
USP19-202ENST00000398888 NLRP13Q86W25 1043 aa16.28■□□□□ 0.2
USP19-202ENST00000398888 TRERF1Q96PN7 1200 aa16.28■□□□□ 0.2
USP19-202ENST00000398888 CALCOCO1Q9P1Z2 691 aa16.27■□□□□ 0.2
USP19-202ENST00000398888 WASHC2AQ641Q2 1341 aa16.27■□□□□ 0.19
USP19-202ENST00000398888 RDXP35241 583 aaKnown RBP16.26■□□□□ 0.19
USP19-202ENST00000398888 CUX1P39880 1505 aa16.26■□□□□ 0.19
USP19-202ENST00000398888 RNF214Q8ND24 703 aa16.26■□□□□ 0.19
USP19-202ENST00000398888 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
USP19-202ENST00000398888 KIF15Q9NS87 1388 aa16.26■□□□□ 0.19
USP19-202ENST00000398888 MYOM3Q5VTT5 1437 aa16.26■□□□□ 0.19
USP19-202ENST00000398888 TIAM1Q13009 1591 aa16.25■□□□□ 0.19
USP19-202ENST00000398888 IFT57Q9NWB7 429 aa16.25■□□□□ 0.19
USP19-202ENST00000398888 KIF3AQ9Y496 699 aa16.25■□□□□ 0.19
USP19-202ENST00000398888 KIF16BQ96L93 1317 aa16.25■□□□□ 0.19
USP19-202ENST00000398888 GPATCH11Q8N954 259 aa16.25■□□□□ 0.19
USP19-202ENST00000398888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.25■□□□□ 0.19
USP19-202ENST00000398888 VGLL3A8MV65 326 aa16.24■□□□□ 0.19
USP19-202ENST00000398888 AAMPQ13685 434 aa16.24■□□□□ 0.19
USP19-202ENST00000398888 DNAJC2Q99543 621 aaKnown RBP16.24■□□□□ 0.19
USP19-202ENST00000398888 MYBBP1AQ9BQG0 1328 aaKnown RBP16.23■□□□□ 0.19
USP19-202ENST00000398888 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
USP19-202ENST00000398888 LETM1O95202 739 aaPredicted RBP16.23■□□□□ 0.19
USP19-202ENST00000398888 H0YHG0 523 aa16.23■□□□□ 0.19
USP19-202ENST00000398888 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
USP19-202ENST00000398888 HSP90AB3PQ58FF7 597 aa16.23■□□□□ 0.19
USP19-202ENST00000398888 FYCO1Q9BQS8 1478 aa16.22■□□□□ 0.19
USP19-202ENST00000398888 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
USP19-202ENST00000398888 NCAPD3P42695 1498 aa16.21■□□□□ 0.19
USP19-202ENST00000398888 MCM4P33991 863 aa16.21■□□□□ 0.18
USP19-202ENST00000398888 SASS6Q6UVJ0 657 aa16.21■□□□□ 0.18
USP19-202ENST00000398888 MAP3K1Q13233 1512 aa16.2■□□□□ 0.18
USP19-202ENST00000398888 CHGAP10645 457 aaKnown RBP16.2■□□□□ 0.18
USP19-202ENST00000398888 LEKR1Q6ZMV7 388 aa16.2■□□□□ 0.18
USP19-202ENST00000398888 ST18O60284 1047 aa16.2■□□□□ 0.18
USP19-202ENST00000398888 SMAP1Q8IYB5 467 aaPredicted RBP16.2■□□□□ 0.18
USP19-202ENST00000398888 TIGD1Q96MW7 591 aa16.2■□□□□ 0.18
USP19-202ENST00000398888 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
USP19-202ENST00000398888 FOXD4L6Q3SYB3 417 aaPredicted RBP16.19■□□□□ 0.18
USP19-202ENST00000398888 MCTP1Q6DN14 999 aa16.19■□□□□ 0.18
USP19-202ENST00000398888 FOXD4L3Q6VB84 417 aaPredicted RBP16.19■□□□□ 0.18
USP19-202ENST00000398888 NUP155O75694 1391 aa16.19■□□□□ 0.18
USP19-202ENST00000398888 CAVIN1Q6NZI2 390 aaKnown RBP16.19■□□□□ 0.18
USP19-202ENST00000398888 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
USP19-202ENST00000398888 USP47Q96K76 1375 aa16.18■□□□□ 0.18
USP19-202ENST00000398888 ERCC6Q03468 1493 aa16.18■□□□□ 0.18
USP19-202ENST00000398888 DYNC1I1O14576 645 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms