RNA–Protein interactions for RNA: ENST00000398594.3

PCDHGB7-201, Transcript of protocadherin gamma subfamily B, 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB7, Length 4,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB7-201ENST00000398594 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
PCDHGB7-201ENST00000398594 EVA1CP58658 441 aa18.24■□□□□ 0.51
PCDHGB7-201ENST00000398594 CHMP3Q9Y3E7 222 aa18.24■□□□□ 0.51
PCDHGB7-201ENST00000398594 SYNJ2O15056 1496 aa18.24■□□□□ 0.51
PCDHGB7-201ENST00000398594 PSME1Q06323 249 aa18.23■□□□□ 0.51
PCDHGB7-201ENST00000398594 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.23■□□□□ 0.51
PCDHGB7-201ENST00000398594 TMEM132EQ6IEE7 984 aa18.23■□□□□ 0.51
PCDHGB7-201ENST00000398594 CDK11BP21127 795 aaKnown RBP18.22■□□□□ 0.51
PCDHGB7-201ENST00000398594 LMOD3Q0VAK6 560 aa18.22■□□□□ 0.51
PCDHGB7-201ENST00000398594 CASKIN1Q8WXD9 1431 aa18.22■□□□□ 0.51
PCDHGB7-201ENST00000398594 KIF21BO75037 1637 aa18.21■□□□□ 0.51
PCDHGB7-201ENST00000398594 RAPGEF3O95398 923 aa18.21■□□□□ 0.5
PCDHGB7-201ENST00000398594 NCOA2Q15596 1464 aa18.2■□□□□ 0.5
PCDHGB7-201ENST00000398594 LRRC9Q6ZRR7 1453 aa18.2■□□□□ 0.5
PCDHGB7-201ENST00000398594 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
PCDHGB7-201ENST00000398594 HSP90AB1P08238 724 aaKnown RBP18.19■□□□□ 0.5
PCDHGB7-201ENST00000398594 ISY1Q9ULR0 285 aaKnown RBP18.19■□□□□ 0.5
PCDHGB7-201ENST00000398594 CENPJQ9HC77 1338 aaPredicted RBP18.19■□□□□ 0.5
PCDHGB7-201ENST00000398594 ARHGAP5Q13017 1502 aa18.19■□□□□ 0.5
PCDHGB7-201ENST00000398594 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
PCDHGB7-201ENST00000398594 GTF2E1P29083 439 aaPredicted RBP18.18■□□□□ 0.5
PCDHGB7-201ENST00000398594 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
PCDHGB7-201ENST00000398594 ARAP1Q96P48 1450 aa18.18■□□□□ 0.5
PCDHGB7-201ENST00000398594 TAF7LQ5H9L4 462 aa18.18■□□□□ 0.5
PCDHGB7-201ENST00000398594 MYBBP1AQ9BQG0 1328 aaKnown RBP18.17■□□□□ 0.5
PCDHGB7-201ENST00000398594 GORABQ5T7V8 394 aa18.17■□□□□ 0.5
PCDHGB7-201ENST00000398594 RWDD1Q9H446 243 aaPredicted RBP18.17■□□□□ 0.5
PCDHGB7-201ENST00000398594 ATF3P18847 181 aa18.16■□□□□ 0.5
PCDHGB7-201ENST00000398594 TEFQ10587 303 aa18.16■□□□□ 0.5
PCDHGB7-201ENST00000398594 TXNDC2Q86VQ3 553 aa18.16■□□□□ 0.5
PCDHGB7-201ENST00000398594 PRKRIP1Q9H875 184 aaPredicted RBP18.16■□□□□ 0.5
PCDHGB7-201ENST00000398594 C1orf141Q5JVX7 400 aa18.15■□□□□ 0.5
PCDHGB7-201ENST00000398594 SCAPERQ9BY12 1400 aa18.15■□□□□ 0.5
PCDHGB7-201ENST00000398594 CFAP70Q5T0N1 1121 aa18.14■□□□□ 0.49
PCDHGB7-201ENST00000398594 CUX1P39880 1505 aa18.14■□□□□ 0.49
PCDHGB7-201ENST00000398594 BCL2L13Q9BXK5 485 aa18.14■□□□□ 0.49
PCDHGB7-201ENST00000398594 TMX4Q9H1E5 349 aaPredicted RBP18.14■□□□□ 0.49
PCDHGB7-201ENST00000398594 FYCO1Q9BQS8 1478 aa18.13■□□□□ 0.49
PCDHGB7-201ENST00000398594 KIAA1211Q6ZU35 1233 aa18.13■□□□□ 0.49
PCDHGB7-201ENST00000398594 ANP32EQ9BTT0 268 aa18.13■□□□□ 0.49
PCDHGB7-201ENST00000398594 MCCP23508 829 aa18.13■□□□□ 0.49
PCDHGB7-201ENST00000398594 NUTM2GQ5VZR2 741 aa18.13■□□□□ 0.49
PCDHGB7-201ENST00000398594 HDAC5Q9UQL6 1122 aa18.12■□□□□ 0.49
PCDHGB7-201ENST00000398594 STAC3Q96MF2 364 aa18.11■□□□□ 0.49
PCDHGB7-201ENST00000398594 APAF1O14727 1248 aa18.11■□□□□ 0.49
PCDHGB7-201ENST00000398594 CABP2Q9NPB3 220 aa18.11■□□□□ 0.49
PCDHGB7-201ENST00000398594 PDE3BQ13370 1112 aa18.11■□□□□ 0.49
PCDHGB7-201ENST00000398594 DIAPH1O60610 1272 aaKnown RBP18.1■□□□□ 0.49
PCDHGB7-201ENST00000398594 HMMRO75330 724 aa18.1■□□□□ 0.49
PCDHGB7-201ENST00000398594 GGNBP2Q9H3C7 697 aa18.1■□□□□ 0.49
PCDHGB7-201ENST00000398594 SYTL4Q96C24 671 aaPredicted RBP18.1■□□□□ 0.49
PCDHGB7-201ENST00000398594 SPRYD3Q8NCJ5 442 aa18.09■□□□□ 0.49
PCDHGB7-201ENST00000398594 HSCBQ8IWL3 235 aa18.09■□□□□ 0.49
PCDHGB7-201ENST00000398594 NGEFQ8N5V2 710 aa18.09■□□□□ 0.49
PCDHGB7-201ENST00000398594 PRXQ9BXM0 1461 aa18.08■□□□□ 0.49
PCDHGB7-201ENST00000398594 NLRP6P59044 892 aa18.07■□□□□ 0.48
PCDHGB7-201ENST00000398594 PLCB2Q00722 1185 aa18.07■□□□□ 0.48
PCDHGB7-201ENST00000398594 PROSER2Q86WR7 435 aaPredicted RBP18.07■□□□□ 0.48
PCDHGB7-201ENST00000398594 TRIM44Q96DX7 344 aaPredicted RBP18.06■□□□□ 0.48
PCDHGB7-201ENST00000398594 ERICH3Q5RHP9 1530 aa18.06■□□□□ 0.48
PCDHGB7-201ENST00000398594 EIF2S2P20042 333 aaKnown RBP18.06■□□□□ 0.48
PCDHGB7-201ENST00000398594 TROQ12816 1431 aaPredicted RBP18.05■□□□□ 0.48
PCDHGB7-201ENST00000398594 GOLGA6L4A6NEF3 574 aa18.05■□□□□ 0.48
PCDHGB7-201ENST00000398594 TTC5Q8N0Z6 440 aa18.05■□□□□ 0.48
PCDHGB7-201ENST00000398594 TRIM6-TRIM34B2RNG4 842 aa18.05■□□□□ 0.48
PCDHGB7-201ENST00000398594 MSH5O43196 834 aa18.05■□□□□ 0.48
PCDHGB7-201ENST00000398594 PTMAP06454 111 aaKnown RBP18.05■□□□□ 0.48
PCDHGB7-201ENST00000398594 TCERG1O14776 1098 aaKnown RBP18.04■□□□□ 0.48
PCDHGB7-201ENST00000398594 PMFBP1Q8TBY8 1022 aa18.04■□□□□ 0.48
PCDHGB7-201ENST00000398594 FRAT2O75474 233 aaPredicted RBP18.04■□□□□ 0.48
PCDHGB7-201ENST00000398594 MEX3CQ5U5Q3 659 aaKnown RBP18.04■□□□□ 0.48
PCDHGB7-201ENST00000398594 THEMISQ8N1K5 641 aaPredicted RBP18.04■□□□□ 0.48
PCDHGB7-201ENST00000398594 NLRP2Q9NX02 1062 aa18.04■□□□□ 0.48
PCDHGB7-201ENST00000398594 G3V3G9 751 aa18.03■□□□□ 0.48
PCDHGB7-201ENST00000398594 DCAF8Q5TAQ9 597 aa18.03■□□□□ 0.48
PCDHGB7-201ENST00000398594 CFAP44Q96MT7 982 aa18.03■□□□□ 0.48
PCDHGB7-201ENST00000398594 NECTIN2Q92692 538 aa18.03■□□□□ 0.48
PCDHGB7-201ENST00000398594 TOP2BQ02880 1626 aa18.02■□□□□ 0.48
PCDHGB7-201ENST00000398594 HMOX1P09601 288 aa18.02■□□□□ 0.48
PCDHGB7-201ENST00000398594 SLC26A8Q96RN1 970 aa18.02■□□□□ 0.48
PCDHGB7-201ENST00000398594 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
PCDHGB7-201ENST00000398594 RIPK4P57078 832 aa18.02■□□□□ 0.47
PCDHGB7-201ENST00000398594 RAPGEF4Q8WZA2 1011 aa18.02■□□□□ 0.47
PCDHGB7-201ENST00000398594 NBPF1Q3BBV0 1214 aa18.01■□□□□ 0.47
PCDHGB7-201ENST00000398594 BICRAQ9NZM4 1560 aa18.01■□□□□ 0.47
PCDHGB7-201ENST00000398594 C9orf84Q5VXU9 1444 aa18.01■□□□□ 0.47
PCDHGB7-201ENST00000398594 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
PCDHGB7-201ENST00000398594 ESCO1Q5FWF5 840 aa18.01■□□□□ 0.47
PCDHGB7-201ENST00000398594 PRAM1Q96QH2 718 aa18■□□□□ 0.47
PCDHGB7-201ENST00000398594 GPATCH3Q96I76 525 aa18■□□□□ 0.47
PCDHGB7-201ENST00000398594 KIAA0586Q9BVV6 1533 aa18■□□□□ 0.47
PCDHGB7-201ENST00000398594 PLIN1O60240 522 aa17.99■□□□□ 0.47
PCDHGB7-201ENST00000398594 USP35Q9P2H5 1018 aa17.99■□□□□ 0.47
PCDHGB7-201ENST00000398594 E9PSI1 815 aa17.99■□□□□ 0.47
PCDHGB7-201ENST00000398594 SLC52A1Q9NWF4 448 aa17.98■□□□□ 0.47
PCDHGB7-201ENST00000398594 NOP58Q9Y2X3 529 aaKnown RBP17.98■□□□□ 0.47
PCDHGB7-201ENST00000398594 ERICH6BQ5W0A0 696 aa17.98■□□□□ 0.47
PCDHGB7-201ENST00000398594 ABTB2Q8N961 1025 aa17.97■□□□□ 0.47
PCDHGB7-201ENST00000398594 GNL2Q13823 731 aaKnown RBP17.96■□□□□ 0.47
PCDHGB7-201ENST00000398594 MFAP1P55081 439 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms