RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 MYO5CQ9NQX4 1742 aa25.13■■□□□ 1.61
CHRFAM7A-202ENST00000397827 ST20-MTHFSA0A0A6YYL1 179 aa25.13■■□□□ 1.61
CHRFAM7A-202ENST00000397827 RGL3Q3MIN7 710 aa25.12■■□□□ 1.61
CHRFAM7A-202ENST00000397827 CCDC144AA2RUR9 1427 aa25.11■■□□□ 1.61
CHRFAM7A-202ENST00000397827 MAST1Q9Y2H9 1570 aa25.1■■□□□ 1.61
CHRFAM7A-202ENST00000397827 PLEKHH2Q8IVE3 1493 aa25.1■■□□□ 1.61
CHRFAM7A-202ENST00000397827 ARID4BQ4LE39 1312 aaPredicted RBP25.09■■□□□ 1.61
CHRFAM7A-202ENST00000397827 ROCK2O75116 1388 aaKnown RBP25.08■■□□□ 1.6
CHRFAM7A-202ENST00000397827 PLA2R1Q13018 1463 aa25.06■■□□□ 1.6
CHRFAM7A-202ENST00000397827 ZBED9Q6R2W3 1325 aa25.06■■□□□ 1.6
CHRFAM7A-202ENST00000397827 ERICH6Q7L0X2 663 aa25.06■■□□□ 1.6
CHRFAM7A-202ENST00000397827 ZCCHC11Q5TAX3 1644 aaKnown RBP25.06■■□□□ 1.6
CHRFAM7A-202ENST00000397827 UNC13BO14795 1591 aa25.06■■□□□ 1.6
CHRFAM7A-202ENST00000397827 PLCH2O75038 1416 aa25.04■■□□□ 1.6
CHRFAM7A-202ENST00000397827 CLASP1Q7Z460 1538 aa25.03■■□□□ 1.6
CHRFAM7A-202ENST00000397827 PLXNC1O60486 1568 aa25.03■■□□□ 1.6
CHRFAM7A-202ENST00000397827 EFCAB2Q5VUJ9 269 aa25.03■■□□□ 1.6
CHRFAM7A-202ENST00000397827 NBPF1Q3BBV0 1214 aa25.01■■□□□ 1.59
CHRFAM7A-202ENST00000397827 PRAG1Q86YV5 1406 aa25.01■■□□□ 1.59
CHRFAM7A-202ENST00000397827 DUOX2Q9NRD8 1548 aa24.99■■□□□ 1.59
CHRFAM7A-202ENST00000397827 IQGAP3Q86VI3 1631 aa24.98■■□□□ 1.59
CHRFAM7A-202ENST00000397827 TRAPPC8Q9Y2L5 1435 aa24.98■■□□□ 1.59
CHRFAM7A-202ENST00000397827 A2MP01023 1474 aa24.97■■□□□ 1.59
CHRFAM7A-202ENST00000397827 SENP3-EIF4A1A0A087X0R7 540 aa24.97■■□□□ 1.59
CHRFAM7A-202ENST00000397827 UHRF1BP1LA0JNW5 1464 aa24.96■■□□□ 1.59
CHRFAM7A-202ENST00000397827 TRPM1Q7Z4N2 1603 aa24.96■■□□□ 1.59
CHRFAM7A-202ENST00000397827 ABCC1P33527 1531 aa24.94■■□□□ 1.58
CHRFAM7A-202ENST00000397827 ERBINQ96RT1 1412 aa24.94■■□□□ 1.58
CHRFAM7A-202ENST00000397827 AFAP1Q8N556 730 aa24.93■■□□□ 1.58
CHRFAM7A-202ENST00000397827 TMC1Q8TDI8 760 aa24.92■■□□□ 1.58
CHRFAM7A-202ENST00000397827 MAGI2Q86UL8 1455 aa24.9■■□□□ 1.58
CHRFAM7A-202ENST00000397827 PNISRQ8TF01 805 aaKnown RBP24.9■■□□□ 1.58
CHRFAM7A-202ENST00000397827 SPAG9O60271 1321 aaKnown RBP24.89■■□□□ 1.57
CHRFAM7A-202ENST00000397827 GPRASP1Q5JY77 1395 aa24.86■■□□□ 1.57
CHRFAM7A-202ENST00000397827 RBM19Q9Y4C8 960 aaKnown RBP24.85■■□□□ 1.57
CHRFAM7A-202ENST00000397827 ATP10AO60312 1499 aa24.85■■□□□ 1.57
CHRFAM7A-202ENST00000397827 E9PCH4 1651 aa24.85■■□□□ 1.57
CHRFAM7A-202ENST00000397827 MYBBP1AQ9BQG0 1328 aaKnown RBP24.83■■□□□ 1.56
CHRFAM7A-202ENST00000397827 RALBP1Q15311 655 aa24.82■■□□□ 1.56
CHRFAM7A-202ENST00000397827 ERICH6BQ5W0A0 696 aa24.82■■□□□ 1.56
CHRFAM7A-202ENST00000397827 PPP4R2Q9NY27 417 aa24.82■■□□□ 1.56
CHRFAM7A-202ENST00000397827 TESK2Q96S53 571 aa24.81■■□□□ 1.56
CHRFAM7A-202ENST00000397827 DISP3Q9P2K9 1392 aa24.8■■□□□ 1.56
CHRFAM7A-202ENST00000397827 PRDM15P57071 1507 aaPredicted RBP24.8■■□□□ 1.56
CHRFAM7A-202ENST00000397827 SMG6Q86US8 1419 aaKnown RBP24.79■■□□□ 1.56
CHRFAM7A-202ENST00000397827 ZFYVE16Q7Z3T8 1539 aa24.79■■□□□ 1.56
CHRFAM7A-202ENST00000397827 WDR7Q9Y4E6 1490 aa24.78■■□□□ 1.56
CHRFAM7A-202ENST00000397827 BRD4O60885 1362 aaPredicted RBP24.77■■□□□ 1.56
CHRFAM7A-202ENST00000397827 NUDCQ9Y266 331 aa24.77■■□□□ 1.56
CHRFAM7A-202ENST00000397827 PER1O15534 1290 aaPredicted RBP24.76■■□□□ 1.56
CHRFAM7A-202ENST00000397827 MYT1LQ9UL68 1186 aa24.76■■□□□ 1.56
CHRFAM7A-202ENST00000397827 RTEL1-TNFRSF6BF6WH68 1400 aa24.76■■□□□ 1.55
CHRFAM7A-202ENST00000397827 COL17A1Q9UMD9 1497 aaPredicted RBP24.76■■□□□ 1.55
CHRFAM7A-202ENST00000397827 KTN1Q86UP2 1357 aaKnown RBP24.76■■□□□ 1.55
CHRFAM7A-202ENST00000397827 B4GALNT3Q6L9W6 998 aa24.76■■□□□ 1.55
CHRFAM7A-202ENST00000397827 EIF2AK4Q9P2K8 1649 aaKnown RBP24.76■■□□□ 1.55
CHRFAM7A-202ENST00000397827 LAMC1P11047 1609 aa24.75■■□□□ 1.55
CHRFAM7A-202ENST00000397827 FANCAO15360 1455 aa24.75■■□□□ 1.55
CHRFAM7A-202ENST00000397827 ARAP3Q8WWN8 1544 aa24.74■■□□□ 1.55
CHRFAM7A-202ENST00000397827 LRPPRCP42704 1394 aaKnown RBP24.74■■□□□ 1.55
CHRFAM7A-202ENST00000397827 PARD3Q8TEW0 1356 aa24.72■■□□□ 1.55
CHRFAM7A-202ENST00000397827 CC2D1BQ5T0F9 858 aaKnown RBP24.72■■□□□ 1.55
CHRFAM7A-202ENST00000397827 TMF1P82094 1093 aa24.71■■□□□ 1.55
CHRFAM7A-202ENST00000397827 PANK3Q9H999 370 aa24.71■■□□□ 1.55
CHRFAM7A-202ENST00000397827 NLRP13Q86W25 1043 aa24.71■■□□□ 1.55
CHRFAM7A-202ENST00000397827 KIF3BO15066 747 aa24.7■■□□□ 1.54
CHRFAM7A-202ENST00000397827 SCAPERQ9BY12 1400 aa24.69■■□□□ 1.54
CHRFAM7A-202ENST00000397827 MSH5O43196 834 aa24.69■■□□□ 1.54
CHRFAM7A-202ENST00000397827 ATP7AQ04656 1500 aa24.68■■□□□ 1.54
CHRFAM7A-202ENST00000397827 ABCA9Q8IUA7 1624 aa24.68■■□□□ 1.54
CHRFAM7A-202ENST00000397827 TRPM2O94759 1503 aa24.67■■□□□ 1.54
CHRFAM7A-202ENST00000397827 SALL2Q9Y467 1007 aaPredicted RBP24.67■■□□□ 1.54
CHRFAM7A-202ENST00000397827 ADGRL1O94910 1474 aa24.67■■□□□ 1.54
CHRFAM7A-202ENST00000397827 RNF17Q9BXT8 1623 aaKnown RBP24.66■■□□□ 1.54
CHRFAM7A-202ENST00000397827 SPHKAPQ2M3C7 1700 aa24.65■■□□□ 1.54
CHRFAM7A-202ENST00000397827 DEPDC5O75140 1603 aa24.65■■□□□ 1.54
CHRFAM7A-202ENST00000397827 CLTCL1P53675 1640 aa24.65■■□□□ 1.54
CHRFAM7A-202ENST00000397827 MADDQ8WXG6 1647 aa24.65■■□□□ 1.54
CHRFAM7A-202ENST00000397827 PTPRTO14522 1441 aa24.65■■□□□ 1.54
CHRFAM7A-202ENST00000397827 INO80Q9ULG1 1556 aaPredicted RBP24.65■■□□□ 1.54
CHRFAM7A-202ENST00000397827 ASXL2Q76L83 1435 aa24.64■■□□□ 1.54
CHRFAM7A-202ENST00000397827 KANK1Q14678 1352 aa24.63■■□□□ 1.53
CHRFAM7A-202ENST00000397827 ANO8Q9HCE9 1232 aaPredicted RBP24.62■■□□□ 1.53
CHRFAM7A-202ENST00000397827 RNF123Q5XPI4 1314 aa24.62■■□□□ 1.53
CHRFAM7A-202ENST00000397827 CEP152O94986 1710 aa24.61■■□□□ 1.53
CHRFAM7A-202ENST00000397827 TET3O43151 1660 aa24.61■■□□□ 1.53
CHRFAM7A-202ENST00000397827 WASHC2CQ9Y4E1 1318 aa24.6■■□□□ 1.53
CHRFAM7A-202ENST00000397827 VWDEQ8N2E2 1590 aa24.57■■□□□ 1.52
CHRFAM7A-202ENST00000397827 IQGAP1P46940 1657 aa24.56■■□□□ 1.52
CHRFAM7A-202ENST00000397827 UGGT1Q9NYU2 1555 aa24.55■■□□□ 1.52
CHRFAM7A-202ENST00000397827 SCAF11Q99590 1463 aaKnown RBP24.53■■□□□ 1.52
CHRFAM7A-202ENST00000397827 MROH1Q8NDA8 1641 aa24.53■■□□□ 1.52
CHRFAM7A-202ENST00000397827 STAC3Q96MF2 364 aa24.52■■□□□ 1.52
CHRFAM7A-202ENST00000397827 NPM1P06748 294 aaKnown RBP eCLIP24.5■■□□□ 1.51
CHRFAM7A-202ENST00000397827 KNSTRNQ9Y448 316 aa24.5■■□□□ 1.51
CHRFAM7A-202ENST00000397827 KIDINS220Q9ULH0 1771 aa24.5■■□□□ 1.51
CHRFAM7A-202ENST00000397827 CFAP70Q5T0N1 1121 aa24.49■■□□□ 1.51
CHRFAM7A-202ENST00000397827 CCDC136Q96JN2 1154 aa24.49■■□□□ 1.51
CHRFAM7A-202ENST00000397827 CDCA7LQ96GN5 454 aa24.49■■□□□ 1.51
CHRFAM7A-202ENST00000397827 ADGRF5Q8IZF2 1346 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms