RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 MNS1Q8NEH6 495 aa11.18□□□□□ -0.62
TRPM1-202ENST00000397795 TRAK2O60296 914 aa11.18□□□□□ -0.62
TRPM1-202ENST00000397795 RRAGDQ9NQL2 400 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-202ENST00000397795 KTN1Q86UP2 1357 aaKnown RBP11.17□□□□□ -0.62
TRPM1-202ENST00000397795 OS9Q13438 667 aaPredicted RBP11.17□□□□□ -0.62
TRPM1-202ENST00000397795 PES1O00541 588 aaKnown RBP11.17□□□□□ -0.62
TRPM1-202ENST00000397795 KIAA0754O94854 1291 aa11.17□□□□□ -0.62
TRPM1-202ENST00000397795 AEBP1Q8IUX7 1158 aa11.17□□□□□ -0.62
TRPM1-202ENST00000397795 GRPEL1Q9HAV7 217 aa11.17□□□□□ -0.62
TRPM1-202ENST00000397795 CCDC173Q0VFZ6 552 aa11.16□□□□□ -0.62
TRPM1-202ENST00000397795 ZHX1Q9UKY1 873 aaPredicted RBP11.16□□□□□ -0.62
TRPM1-202ENST00000397795 ZNF526Q8TF50 670 aaPredicted RBP11.15□□□□□ -0.62
TRPM1-202ENST00000397795 BCL11BQ9C0K0 894 aaPredicted RBP11.15□□□□□ -0.62
TRPM1-202ENST00000397795 HMGN5P82970 282 aaKnown RBP11.15□□□□□ -0.62
TRPM1-202ENST00000397795 AKNAQ7Z591 1439 aa11.15□□□□□ -0.62
TRPM1-202ENST00000397795 SMAP1Q8IYB5 467 aaPredicted RBP11.15□□□□□ -0.62
TRPM1-202ENST00000397795 RSPH4AQ5TD94 716 aa11.15□□□□□ -0.63
TRPM1-202ENST00000397795 MAPK8IP3Q9UPT6 1336 aa11.14□□□□□ -0.63
TRPM1-202ENST00000397795 HOMER1Q86YM7 354 aa11.14□□□□□ -0.63
TRPM1-202ENST00000397795 ZSCAN30Q86W11 494 aa11.14□□□□□ -0.63
TRPM1-202ENST00000397795 SSR1P43307 286 aaKnown RBP11.13□□□□□ -0.63
TRPM1-202ENST00000397795 IPO7O95373 1038 aaKnown RBP11.13□□□□□ -0.63
TRPM1-202ENST00000397795 CRBNQ96SW2 442 aa11.13□□□□□ -0.63
TRPM1-202ENST00000397795 DDX49Q9Y6V7 483 aaKnown RBP11.13□□□□□ -0.63
TRPM1-202ENST00000397795 UQCRHLA0A096LP55 91 aa11.13□□□□□ -0.63
TRPM1-202ENST00000397795 UQCRHP07919 91 aa11.13□□□□□ -0.63
TRPM1-202ENST00000397795 CCDC39Q9UFE4 941 aa11.13□□□□□ -0.63
TRPM1-202ENST00000397795 BECN2A8MW95 431 aa11.13□□□□□ -0.63
TRPM1-202ENST00000397795 NASPP49321 788 aaPredicted RBP11.13□□□□□ -0.63
TRPM1-202ENST00000397795 CAGE1Q8TC20 777 aa11.13□□□□□ -0.63
TRPM1-202ENST00000397795 CCDC88BA6NC98 1476 aa11.12□□□□□ -0.63
TRPM1-202ENST00000397795 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRPM1-202ENST00000397795 IRX3P78415 501 aaPredicted RBP11.12□□□□□ -0.63
TRPM1-202ENST00000397795 HOMEZQ8IX15 550 aa11.12□□□□□ -0.63
TRPM1-202ENST00000397795 RALBP1Q15311 655 aa11.12□□□□□ -0.63
TRPM1-202ENST00000397795 CNTLNQ9NXG0 1405 aa11.11□□□□□ -0.63
TRPM1-202ENST00000397795 PRDM10Q9NQV6 1147 aa11.1□□□□□ -0.63
TRPM1-202ENST00000397795 ATP6V1DQ9Y5K8 247 aa11.1□□□□□ -0.63
TRPM1-202ENST00000397795 MCM4P33991 863 aa11.1□□□□□ -0.63
TRPM1-202ENST00000397795 XRCC6P12956 609 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRPM1-202ENST00000397795 DCAF11Q8TEB1 546 aa11.09□□□□□ -0.63
TRPM1-202ENST00000397795 TPD52L1Q16890 204 aaPredicted RBP11.09□□□□□ -0.63
TRPM1-202ENST00000397795 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRPM1-202ENST00000397795 RWDD1Q9H446 243 aaPredicted RBP11.08□□□□□ -0.64
TRPM1-202ENST00000397795 CENPJQ9HC77 1338 aaPredicted RBP11.08□□□□□ -0.64
TRPM1-202ENST00000397795 P3H3Q8IVL6 736 aa11.08□□□□□ -0.64
TRPM1-202ENST00000397795 PLIN1O60240 522 aa11.08□□□□□ -0.64
TRPM1-202ENST00000397795 ST18O60284 1047 aa11.08□□□□□ -0.64
TRPM1-202ENST00000397795 GPATCH11Q8N954 259 aa11.08□□□□□ -0.64
TRPM1-202ENST00000397795 DYNC1I1O14576 645 aa11.07□□□□□ -0.64
TRPM1-202ENST00000397795 SCRIBQ14160 1630 aa11.07□□□□□ -0.64
TRPM1-202ENST00000397795 LETM1O95202 739 aaPredicted RBP11.07□□□□□ -0.64
TRPM1-202ENST00000397795 CREBRFQ8IUR6 639 aa11.07□□□□□ -0.64
TRPM1-202ENST00000397795 MYO6Q9UM54 1294 aa11.07□□□□□ -0.64
TRPM1-202ENST00000397795 MAPK8IP2Q13387 824 aaPredicted RBP11.07□□□□□ -0.64
TRPM1-202ENST00000397795 IFT57Q9NWB7 429 aa11.07□□□□□ -0.64
TRPM1-202ENST00000397795 CALCOCO1Q9P1Z2 691 aa11.07□□□□□ -0.64
TRPM1-202ENST00000397795 CDCA8Q53HL2 280 aa11.07□□□□□ -0.64
TRPM1-202ENST00000397795 GTPBP4Q9BZE4 634 aaKnown RBP11.07□□□□□ -0.64
TRPM1-202ENST00000397795 GOLGA6L10A6NI86 522 aa11.06□□□□□ -0.64
TRPM1-202ENST00000397795 CLGNO14967 610 aa11.06□□□□□ -0.64
TRPM1-202ENST00000397795 PMFBP1Q8TBY8 1022 aa11.06□□□□□ -0.64
TRPM1-202ENST00000397795 PAIP2Q9BPZ3 127 aaKnown RBP11.06□□□□□ -0.64
TRPM1-202ENST00000397795 SETSIPP0DME0 302 aa11.06□□□□□ -0.64
TRPM1-202ENST00000397795 CHIC2Q9UKJ5 165 aa11.06□□□□□ -0.64
TRPM1-202ENST00000397795 KIF20AO95235 890 aa11.05□□□□□ -0.64
TRPM1-202ENST00000397795 MFAP1P55081 439 aaKnown RBP11.05□□□□□ -0.64
TRPM1-202ENST00000397795 GOLGA2Q08379 1002 aa11.05□□□□□ -0.64
TRPM1-202ENST00000397795 CLASRPQ8N2M8 674 aaKnown RBP11.05□□□□□ -0.64
TRPM1-202ENST00000397795 RASSF8Q8NHQ8 419 aa11.05□□□□□ -0.64
TRPM1-202ENST00000397795 CCDC9Q9Y3X0 531 aaKnown RBP11.05□□□□□ -0.64
TRPM1-202ENST00000397795 FHAD1B1AJZ9 1412 aa11.05□□□□□ -0.64
TRPM1-202ENST00000397795 KNSTRNQ9Y448 316 aa11.04□□□□□ -0.64
TRPM1-202ENST00000397795 U2SURPO15042 1029 aaKnown RBP11.04□□□□□ -0.64
TRPM1-202ENST00000397795 CCP110O43303 1012 aa11.04□□□□□ -0.64
TRPM1-202ENST00000397795 ANKRD20A12PQ8NF67 263 aa11.04□□□□□ -0.64
TRPM1-202ENST00000397795 CHMP4CQ96CF2 233 aa11.04□□□□□ -0.64
TRPM1-202ENST00000397795 TERF1P54274 439 aa11.04□□□□□ -0.64
TRPM1-202ENST00000397795 NLRP13Q86W25 1043 aa11.04□□□□□ -0.64
TRPM1-202ENST00000397795 PDCL2Q8N4E4 241 aa11.04□□□□□ -0.64
TRPM1-202ENST00000397795 EIF3JO75822 258 aaKnown RBP11.03□□□□□ -0.64
TRPM1-202ENST00000397795 CHGAP10645 457 aaKnown RBP11.03□□□□□ -0.64
TRPM1-202ENST00000397795 SF3A1Q15459 793 aaKnown RBP11.03□□□□□ -0.64
TRPM1-202ENST00000397795 AXDND1Q5T1B0 1012 aaPredicted RBP11.03□□□□□ -0.64
TRPM1-202ENST00000397795 SASS6Q6UVJ0 657 aa11.03□□□□□ -0.64
TRPM1-202ENST00000397795 BCCIPQ9P287 314 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRPM1-202ENST00000397795 STAG3Q9UJ98 1225 aa11.03□□□□□ -0.64
TRPM1-202ENST00000397795 WDR97A6NE52 1622 aa11.03□□□□□ -0.64
TRPM1-202ENST00000397795 CAVIN1Q6NZI2 390 aaKnown RBP11.03□□□□□ -0.64
TRPM1-202ENST00000397795 DDX11Q96FC9 970 aa11.03□□□□□ -0.64
TRPM1-202ENST00000397795 RRP7BPQ9NSQ0 103 aa11.03□□□□□ -0.64
TRPM1-202ENST00000397795 ABCC8Q09428 1581 aa11.03□□□□□ -0.64
TRPM1-202ENST00000397795 PHLDB1Q86UU1 1377 aa11.03□□□□□ -0.64
TRPM1-202ENST00000397795 ROCK2O75116 1388 aaKnown RBP11.03□□□□□ -0.64
TRPM1-202ENST00000397795 CCDC7Q96M83 1385 aa11.03□□□□□ -0.64
TRPM1-202ENST00000397795 CT47B1P0C2W7 299 aaPredicted RBP11.03□□□□□ -0.64
TRPM1-202ENST00000397795 FBXO3Q9UK99 471 aa11.03□□□□□ -0.64
TRPM1-202ENST00000397795 TMCO5BA8MYB1 307 aa11.02□□□□□ -0.64
TRPM1-202ENST00000397795 PABPN1Q86U42 306 aaKnown RBP eCLIP11.02□□□□□ -0.64
TRPM1-202ENST00000397795 CGNQ9P2M7 1197 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms