RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 CCDC144AA2RUR9 1427 aa32.58■■■□□ 2.81
PABPN1-202ENST00000397276 MYO5CQ9NQX4 1742 aa32.57■■■□□ 2.8
PABPN1-202ENST00000397276 IRX6P78412 446 aaPredicted RBP32.56■■■□□ 2.8
PABPN1-202ENST00000397276 BCL11AQ9H165 835 aa32.56■■■□□ 2.8
PABPN1-202ENST00000397276 PLCH2O75038 1416 aa32.55■■■□□ 2.8
PABPN1-202ENST00000397276 ZCCHC11Q5TAX3 1644 aaKnown RBP32.54■■■□□ 2.8
PABPN1-202ENST00000397276 ROCK2O75116 1388 aaKnown RBP32.54■■■□□ 2.8
PABPN1-202ENST00000397276 CLASP1Q7Z460 1538 aa32.54■■■□□ 2.8
PABPN1-202ENST00000397276 POLR1AO95602 1720 aaPredicted RBP32.53■■■□□ 2.8
PABPN1-202ENST00000397276 DHX29Q7Z478 1369 aaKnown RBP32.53■■■□□ 2.8
PABPN1-202ENST00000397276 AFAP1Q8N556 730 aa32.49■■■□□ 2.79
PABPN1-202ENST00000397276 MAST1Q9Y2H9 1570 aa32.49■■■□□ 2.79
PABPN1-202ENST00000397276 NBPF1Q3BBV0 1214 aa32.48■■■□□ 2.79
PABPN1-202ENST00000397276 PLA2R1Q13018 1463 aa32.48■■■□□ 2.79
PABPN1-202ENST00000397276 TRAPPC8Q9Y2L5 1435 aa32.48■■■□□ 2.79
PABPN1-202ENST00000397276 ARID4BQ4LE39 1312 aaPredicted RBP32.45■■■□□ 2.78
PABPN1-202ENST00000397276 SENP3-EIF4A1A0A087X0R7 540 aa32.44■■■□□ 2.78
PABPN1-202ENST00000397276 UHRF1BP1LA0JNW5 1464 aa32.43■■■□□ 2.78
PABPN1-202ENST00000397276 UNC13BO14795 1591 aa32.41■■■□□ 2.78
PABPN1-202ENST00000397276 DUOX2Q9NRD8 1548 aa32.41■■■□□ 2.78
PABPN1-202ENST00000397276 SPAG9O60271 1321 aaKnown RBP32.4■■■□□ 2.78
PABPN1-202ENST00000397276 PLXNC1O60486 1568 aa32.4■■■□□ 2.78
PABPN1-202ENST00000397276 PRAG1Q86YV5 1406 aa32.39■■■□□ 2.78
PABPN1-202ENST00000397276 MSH5O43196 834 aa32.39■■■□□ 2.78
PABPN1-202ENST00000397276 MYT1LQ9UL68 1186 aa32.38■■■□□ 2.77
PABPN1-202ENST00000397276 ZBED9Q6R2W3 1325 aa32.36■■■□□ 2.77
PABPN1-202ENST00000397276 A2MP01023 1474 aa32.34■■■□□ 2.77
PABPN1-202ENST00000397276 ABCC1P33527 1531 aa32.34■■■□□ 2.77
PABPN1-202ENST00000397276 ERBINQ96RT1 1412 aa32.34■■■□□ 2.77
PABPN1-202ENST00000397276 IQGAP3Q86VI3 1631 aa32.32■■■□□ 2.76
PABPN1-202ENST00000397276 TMC1Q8TDI8 760 aa32.31■■■□□ 2.76
PABPN1-202ENST00000397276 TRPM1Q7Z4N2 1603 aa32.25■■■□□ 2.75
PABPN1-202ENST00000397276 WDR7Q9Y4E6 1490 aa32.23■■■□□ 2.75
PABPN1-202ENST00000397276 MAGI2Q86UL8 1455 aa32.23■■■□□ 2.75
PABPN1-202ENST00000397276 PNISRQ8TF01 805 aaKnown RBP32.21■■■□□ 2.75
PABPN1-202ENST00000397276 FANCAO15360 1455 aa32.19■■■□□ 2.74
PABPN1-202ENST00000397276 KIF3BO15066 747 aa32.18■■■□□ 2.74
PABPN1-202ENST00000397276 ATP10AO60312 1499 aa32.16■■■□□ 2.74
PABPN1-202ENST00000397276 GPRASP1Q5JY77 1395 aa32.16■■■□□ 2.74
PABPN1-202ENST00000397276 TESK2Q96S53 571 aa32.16■■■□□ 2.74
PABPN1-202ENST00000397276 SCAPERQ9BY12 1400 aa32.16■■■□□ 2.74
PABPN1-202ENST00000397276 DISP3Q9P2K9 1392 aa32.15■■■□□ 2.74
PABPN1-202ENST00000397276 ZFYVE16Q7Z3T8 1539 aa32.14■■■□□ 2.74
PABPN1-202ENST00000397276 RTEL1-TNFRSF6BF6WH68 1400 aa32.14■■■□□ 2.74
PABPN1-202ENST00000397276 MYBBP1AQ9BQG0 1328 aaKnown RBP32.13■■■□□ 2.73
PABPN1-202ENST00000397276 RALBP1Q15311 655 aa32.13■■■□□ 2.73
PABPN1-202ENST00000397276 ASXL2Q76L83 1435 aa32.1■■■□□ 2.73
PABPN1-202ENST00000397276 CC2D1BQ5T0F9 858 aaKnown RBP32.09■■■□□ 2.73
PABPN1-202ENST00000397276 ADGRL1O94910 1474 aa32.08■■■□□ 2.73
PABPN1-202ENST00000397276 ARAP3Q8WWN8 1544 aa32.07■■■□□ 2.72
PABPN1-202ENST00000397276 PER1O15534 1290 aaPredicted RBP32.07■■■□□ 2.72
PABPN1-202ENST00000397276 E9PCH4 1651 aa32.07■■■□□ 2.72
PABPN1-202ENST00000397276 TMF1P82094 1093 aa32.07■■■□□ 2.72
PABPN1-202ENST00000397276 PANK3Q9H999 370 aa32.07■■■□□ 2.72
PABPN1-202ENST00000397276 PRDM15P57071 1507 aaPredicted RBP32.06■■■□□ 2.72
PABPN1-202ENST00000397276 KTN1Q86UP2 1357 aaKnown RBP32.05■■■□□ 2.72
PABPN1-202ENST00000397276 SALL2Q9Y467 1007 aaPredicted RBP32.04■■■□□ 2.72
PABPN1-202ENST00000397276 ATP7AQ04656 1500 aa32.04■■■□□ 2.72
PABPN1-202ENST00000397276 NPM1P06748 294 aaKnown RBP eCLIP32.04■■■□□ 2.72
PABPN1-202ENST00000397276 BRD4O60885 1362 aaPredicted RBP32.03■■■□□ 2.72
PABPN1-202ENST00000397276 KANK1Q14678 1352 aa32.03■■■□□ 2.72
PABPN1-202ENST00000397276 PPP4R2Q9NY27 417 aa32.02■■■□□ 2.72
PABPN1-202ENST00000397276 COL17A1Q9UMD9 1497 aaPredicted RBP32.02■■■□□ 2.72
PABPN1-202ENST00000397276 NUDCQ9Y266 331 aa32.02■■■□□ 2.72
PABPN1-202ENST00000397276 OSCARQ8IYS5 282 aa32.01■■■□□ 2.71
PABPN1-202ENST00000397276 ABCA9Q8IUA7 1624 aa32■■■□□ 2.71
PABPN1-202ENST00000397276 EIF2AK4Q9P2K8 1649 aaKnown RBP32■■■□□ 2.71
PABPN1-202ENST00000397276 B4GALNT3Q6L9W6 998 aa32■■■□□ 2.71
PABPN1-202ENST00000397276 NLRP13Q86W25 1043 aa31.99■■■□□ 2.71
PABPN1-202ENST00000397276 SMG6Q86US8 1419 aaKnown RBP31.98■■■□□ 2.71
PABPN1-202ENST00000397276 FANCIQ9NVI1 1328 aa31.98■■■□□ 2.71
PABPN1-202ENST00000397276 ERICH6BQ5W0A0 696 aa31.97■■■□□ 2.71
PABPN1-202ENST00000397276 PARD3Q8TEW0 1356 aa31.96■■■□□ 2.71
PABPN1-202ENST00000397276 TRPM2O94759 1503 aa31.95■■■□□ 2.71
PABPN1-202ENST00000397276 PTPRTO14522 1441 aa31.95■■■□□ 2.7
PABPN1-202ENST00000397276 LRPPRCP42704 1394 aaKnown RBP31.94■■■□□ 2.7
PABPN1-202ENST00000397276 INO80Q9ULG1 1556 aaPredicted RBP31.94■■■□□ 2.7
PABPN1-202ENST00000397276 LAMC1P11047 1609 aa31.93■■■□□ 2.7
PABPN1-202ENST00000397276 CLTCL1P53675 1640 aa31.92■■■□□ 2.7
PABPN1-202ENST00000397276 ERICH6Q7L0X2 663 aa31.9■■■□□ 2.7
PABPN1-202ENST00000397276 SPHKAPQ2M3C7 1700 aa31.89■■■□□ 2.7
PABPN1-202ENST00000397276 DEPDC5O75140 1603 aa31.89■■■□□ 2.7
PABPN1-202ENST00000397276 MADDQ8WXG6 1647 aa31.88■■■□□ 2.69
PABPN1-202ENST00000397276 UGGT1Q9NYU2 1555 aa31.87■■■□□ 2.69
PABPN1-202ENST00000397276 TET3O43151 1660 aa31.86■■■□□ 2.69
PABPN1-202ENST00000397276 CFAP70Q5T0N1 1121 aa31.85■■■□□ 2.69
PABPN1-202ENST00000397276 CHGAP10645 457 aaKnown RBP31.84■■■□□ 2.69
PABPN1-202ENST00000397276 GGT6Q6P531 493 aa31.84■■■□□ 2.69
PABPN1-202ENST00000397276 RNF17Q9BXT8 1623 aaKnown RBP31.84■■■□□ 2.69
PABPN1-202ENST00000397276 CEP152O94986 1710 aa31.82■■■□□ 2.68
PABPN1-202ENST00000397276 WASHC2CQ9Y4E1 1318 aa31.82■■■□□ 2.68
PABPN1-202ENST00000397276 ADGRF5Q8IZF2 1346 aa31.81■■■□□ 2.68
PABPN1-202ENST00000397276 CD109Q6YHK3 1445 aa31.81■■■□□ 2.68
PABPN1-202ENST00000397276 VWDEQ8N2E2 1590 aa31.81■■■□□ 2.68
PABPN1-202ENST00000397276 KNSTRNQ9Y448 316 aa31.8■■■□□ 2.68
PABPN1-202ENST00000397276 STAC3Q96MF2 364 aa31.79■■■□□ 2.68
PABPN1-202ENST00000397276 SCAF11Q99590 1463 aaKnown RBP31.79■■■□□ 2.68
PABPN1-202ENST00000397276 ZNF518AQ6AHZ1 1483 aa31.78■■■□□ 2.68
PABPN1-202ENST00000397276 MROH1Q8NDA8 1641 aa31.77■■■□□ 2.68
PABPN1-202ENST00000397276 KIDINS220Q9ULH0 1771 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms