RNA–Protein interactions for RNA: ENST00000397085.3

RAPGEF4-202, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene RAPGEF4, Length 649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-202ENST00000397085 A0A0G2JS52 829 aa12.28□□□□□ -0.44
RAPGEF4-202ENST00000397085 COL9A1P20849 921 aa12.27□□□□□ -0.45
RAPGEF4-202ENST00000397085 LAPTM4BQ86VI4 370 aa12.27□□□□□ -0.45
RAPGEF4-202ENST00000397085 EPAS1Q99814 870 aa12.26□□□□□ -0.45
RAPGEF4-202ENST00000397085 CADPS2Q86UW7 1296 aa12.25□□□□□ -0.45
RAPGEF4-202ENST00000397085 IRX2Q9BZI1 471 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF4-202ENST00000397085 KIAA1468Q9P260 1216 aa12.24□□□□□ -0.45
RAPGEF4-202ENST00000397085 ONECUT3O60422 494 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF4-202ENST00000397085 SOWAHBA6NEL2 793 aa12.21□□□□□ -0.45
RAPGEF4-202ENST00000397085 DPYSL4O14531 572 aa12.21□□□□□ -0.45
RAPGEF4-202ENST00000397085 BCAMP50895 628 aa12.21□□□□□ -0.45
RAPGEF4-202ENST00000397085 C6orf132Q5T0Z8 1188 aa12.21□□□□□ -0.45
RAPGEF4-202ENST00000397085 NYAP1Q6ZVC0 841 aa12.21□□□□□ -0.45
RAPGEF4-202ENST00000397085 ZFRQ96KR1 1074 aaKnown RBP12.2□□□□□ -0.46
RAPGEF4-202ENST00000397085 CAMK2BQ13554 666 aa12.19□□□□□ -0.46
RAPGEF4-202ENST00000397085 RBM33Q96EV2 1170 aaKnown RBP12.19□□□□□ -0.46
RAPGEF4-202ENST00000397085 TRIM6-TRIM34B2RNG4 842 aa12.16□□□□□ -0.46
RAPGEF4-202ENST00000397085 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF4-202ENST00000397085 SEPT9Q9UHD8 586 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF4-202ENST00000397085 DDX12PQ92771 950 aa12.15□□□□□ -0.46
RAPGEF4-202ENST00000397085 FAM98CQ17RN3 349 aaKnown RBP12.14□□□□□ -0.47
RAPGEF4-202ENST00000397085 KCNC4Q03721 635 aa12.12□□□□□ -0.47
RAPGEF4-202ENST00000397085 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
RAPGEF4-202ENST00000397085 WBP1LQ9NX94 342 aa12.12□□□□□ -0.47
RAPGEF4-202ENST00000397085 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF4-202ENST00000397085 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
RAPGEF4-202ENST00000397085 MAP3K7O43318 606 aa12.1□□□□□ -0.47
RAPGEF4-202ENST00000397085 NBR1Q14596 966 aa12.1□□□□□ -0.47
RAPGEF4-202ENST00000397085 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF4-202ENST00000397085 TSR3Q9UJK0 312 aaKnown RBP12.1□□□□□ -0.47
RAPGEF4-202ENST00000397085 HPS5Q9UPZ3 1129 aa12.08□□□□□ -0.48
RAPGEF4-202ENST00000397085 SPDYE16A6NNV3 312 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF4-202ENST00000397085 EN1Q05925 392 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF4-202ENST00000397085 PPP4CP60510 307 aa12.03□□□□□ -0.48
RAPGEF4-202ENST00000397085 PDIA6Q15084 440 aa12.03□□□□□ -0.48
RAPGEF4-202ENST00000397085 TSR1Q2NL82 804 aaKnown RBP12.02□□□□□ -0.49
RAPGEF4-202ENST00000397085 SPRYD3Q8NCJ5 442 aa12.02□□□□□ -0.49
RAPGEF4-202ENST00000397085 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
RAPGEF4-202ENST00000397085 Q6ZNB5 142 aa12□□□□□ -0.49
RAPGEF4-202ENST00000397085 CERKQ8TCT0 537 aa12□□□□□ -0.49
RAPGEF4-202ENST00000397085 WDR70Q9NW82 654 aa12□□□□□ -0.49
RAPGEF4-202ENST00000397085 TSKSQ9UJT2 592 aa12□□□□□ -0.49
RAPGEF4-202ENST00000397085 CDCA7LQ96GN5 454 aa11.98□□□□□ -0.49
RAPGEF4-202ENST00000397085 E2F4Q16254 413 aa11.97□□□□□ -0.49
RAPGEF4-202ENST00000397085 HDGFP51858 240 aaKnown RBP11.96□□□□□ -0.49
RAPGEF4-202ENST00000397085 PRSS12P56730 875 aa11.96□□□□□ -0.49
RAPGEF4-202ENST00000397085 GRXCR2A6NFK2 248 aa11.95□□□□□ -0.5
RAPGEF4-202ENST00000397085 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
RAPGEF4-202ENST00000397085 SAMD7Q7Z3H4 446 aa11.94□□□□□ -0.5
RAPGEF4-202ENST00000397085 SMAPO00193 183 aa11.93□□□□□ -0.5
RAPGEF4-202ENST00000397085 LAPTM4AQ15012 233 aa11.93□□□□□ -0.5
RAPGEF4-202ENST00000397085 PNMA3Q9UL41 463 aa11.92□□□□□ -0.5
RAPGEF4-202ENST00000397085 RNF40O75150 1001 aa11.9□□□□□ -0.5
RAPGEF4-202ENST00000397085 TATDN2Q93075 761 aa11.9□□□□□ -0.5
RAPGEF4-202ENST00000397085 CFAP44Q96MT7 982 aa11.88□□□□□ -0.51
RAPGEF4-202ENST00000397085 ARIH1Q9Y4X5 557 aaPredicted RBP11.88□□□□□ -0.51
RAPGEF4-202ENST00000397085 IL21Q9HBE4 155 aa11.87□□□□□ -0.51
RAPGEF4-202ENST00000397085 TJAP1Q5JTD0 557 aa11.86□□□□□ -0.51
RAPGEF4-202ENST00000397085 NECTIN2Q92692 538 aa11.86□□□□□ -0.51
RAPGEF4-202ENST00000397085 MTRQ99707 1265 aa11.86□□□□□ -0.51
RAPGEF4-202ENST00000397085 NUDT18Q6ZVK8 323 aa11.85□□□□□ -0.51
RAPGEF4-202ENST00000397085 FAM198AQ9UFP1 575 aa11.85□□□□□ -0.51
RAPGEF4-202ENST00000397085 GFRA3O60609 400 aa11.84□□□□□ -0.51
RAPGEF4-202ENST00000397085 SLC4A3P48751 1232 aa11.84□□□□□ -0.51
RAPGEF4-202ENST00000397085 PAXIP1Q6ZW49 1069 aaPredicted RBP11.84□□□□□ -0.51
RAPGEF4-202ENST00000397085 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
RAPGEF4-202ENST00000397085 PRIM1P49642 420 aaKnown RBP11.82□□□□□ -0.52
RAPGEF4-202ENST00000397085 PRKD2Q9BZL6 878 aa11.82□□□□□ -0.52
RAPGEF4-202ENST00000397085 OSBPP22059 807 aa11.81□□□□□ -0.52
RAPGEF4-202ENST00000397085 CDHR5Q9HBB8 845 aa11.81□□□□□ -0.52
RAPGEF4-202ENST00000397085 PPP1R18Q6NYC8 613 aa11.79□□□□□ -0.52
RAPGEF4-202ENST00000397085 SLF2Q8IX21 1173 aa11.79□□□□□ -0.52
RAPGEF4-202ENST00000397085 C3orf80F5H4A9 247 aa11.78□□□□□ -0.52
RAPGEF4-202ENST00000397085 GGCXP38435 758 aa11.77□□□□□ -0.53
RAPGEF4-202ENST00000397085 AMER1Q5JTC6 1135 aaPredicted RBP11.77□□□□□ -0.53
RAPGEF4-202ENST00000397085 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.77□□□□□ -0.53
RAPGEF4-202ENST00000397085 APLP1P51693 650 aa11.76□□□□□ -0.53
RAPGEF4-202ENST00000397085 TRAF7Q6Q0C0 670 aa11.76□□□□□ -0.53
RAPGEF4-202ENST00000397085 V9GY48 417 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF4-202ENST00000397085 NRG2O14511 850 aaPredicted RBP11.74□□□□□ -0.53
RAPGEF4-202ENST00000397085 SWT1Q5T5J6 900 aaKnown RBP11.74□□□□□ -0.53
RAPGEF4-202ENST00000397085 PADI6Q6TGC4 694 aa11.74□□□□□ -0.53
RAPGEF4-202ENST00000397085 ZNF516Q92618 1163 aa11.74□□□□□ -0.53
RAPGEF4-202ENST00000397085 PRR14Q9BWN1 585 aa11.72□□□□□ -0.53
RAPGEF4-202ENST00000397085 COPS2P61201 443 aa11.71□□□□□ -0.53
RAPGEF4-202ENST00000397085 TTC13Q8NBP0 860 aa11.69□□□□□ -0.54
RAPGEF4-202ENST00000397085 NKX2-3Q8TAU0 364 aa11.68□□□□□ -0.54
RAPGEF4-202ENST00000397085 NPDC1Q9NQX5 325 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF4-202ENST00000397085 TMUB1Q9BVT8 246 aa11.66□□□□□ -0.54
RAPGEF4-202ENST00000397085 PDZRN3Q9UPQ7 1066 aa11.66□□□□□ -0.54
RAPGEF4-202ENST00000397085 PCDHB3Q9Y5E6 796 aa11.65□□□□□ -0.54
RAPGEF4-202ENST00000397085 ZPR1O75312 459 aa11.64□□□□□ -0.55
RAPGEF4-202ENST00000397085 EYA1Q99502 592 aa11.63□□□□□ -0.55
RAPGEF4-202ENST00000397085 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
RAPGEF4-202ENST00000397085 RBM46Q8TBY0 533 aaKnown RBP11.61□□□□□ -0.55
RAPGEF4-202ENST00000397085 ARHGEF1Q92888 912 aaKnown RBP11.61□□□□□ -0.55
RAPGEF4-202ENST00000397085 DNAJB2P25686 324 aa11.6□□□□□ -0.55
RAPGEF4-202ENST00000397085 LCE2BO14633 110 aa11.59□□□□□ -0.55
RAPGEF4-202ENST00000397085 KMT5BQ4FZB7 885 aa11.58□□□□□ -0.56
RAPGEF4-202ENST00000397085 MLLT3P42568 568 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms