RNA–Protein interactions for RNA: ENST00000396208.3

CCP110-202, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,151 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-202ENST00000396208 NUTM2FA1L443 756 aa9.63□□□□□ -0.87
CCP110-202ENST00000396208 NUTM2BA6NNL0 878 aaPredicted RBP9.63□□□□□ -0.87
CCP110-202ENST00000396208 NUTM2EB1AL46 878 aaPredicted RBP9.63□□□□□ -0.87
CCP110-202ENST00000396208 DDX10Q13206 875 aaKnown RBP9.63□□□□□ -0.87
CCP110-202ENST00000396208 NUTM2AQ8IVF1 878 aaPredicted RBP9.63□□□□□ -0.87
CCP110-202ENST00000396208 HECW1Q76N89 1606 aa9.63□□□□□ -0.87
CCP110-202ENST00000396208 KIF21BO75037 1637 aa9.63□□□□□ -0.87
CCP110-202ENST00000396208 CASC1Q6TDU7 716 aa9.63□□□□□ -0.87
CCP110-202ENST00000396208 TRAK1Q9UPV9 953 aa9.63□□□□□ -0.87
CCP110-202ENST00000396208 RPGRIP1LQ68CZ1 1315 aa9.63□□□□□ -0.87
CCP110-202ENST00000396208 CDK11BP21127 795 aaKnown RBP9.63□□□□□ -0.87
CCP110-202ENST00000396208 PDE3BQ13370 1112 aa9.62□□□□□ -0.87
CCP110-202ENST00000396208 FTSJ3Q8IY81 847 aaKnown RBP9.62□□□□□ -0.87
CCP110-202ENST00000396208 ESCO1Q5FWF5 840 aa9.62□□□□□ -0.87
CCP110-202ENST00000396208 STK31Q9BXU1 1019 aa9.62□□□□□ -0.87
CCP110-202ENST00000396208 RRBP1Q9P2E9 1410 aaKnown RBP9.61□□□□□ -0.87
CCP110-202ENST00000396208 HSP90AA1P07900 732 aaKnown RBP9.61□□□□□ -0.87
CCP110-202ENST00000396208 TAF7LQ5H9L4 462 aa9.61□□□□□ -0.87
CCP110-202ENST00000396208 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
CCP110-202ENST00000396208 ADGRL1O94910 1474 aa9.6□□□□□ -0.87
CCP110-202ENST00000396208 LTV1Q96GA3 475 aaPredicted RBP9.6□□□□□ -0.87
CCP110-202ENST00000396208 EPRSP07814 1512 aaKnown RBP9.59□□□□□ -0.87
CCP110-202ENST00000396208 CADPS2Q86UW7 1296 aa9.59□□□□□ -0.87
CCP110-202ENST00000396208 SALL2Q9Y467 1007 aaPredicted RBP9.59□□□□□ -0.87
CCP110-202ENST00000396208 SYTL4Q96C24 671 aaPredicted RBP9.59□□□□□ -0.87
CCP110-202ENST00000396208 HNRNPUQ00839 825 aaKnown RBP eCLIP9.59□□□□□ -0.87
CCP110-202ENST00000396208 TEFQ10587 303 aa9.59□□□□□ -0.87
CCP110-202ENST00000396208 FANCAO15360 1455 aa9.59□□□□□ -0.87
CCP110-202ENST00000396208 NLRP13Q86W25 1043 aa9.58□□□□□ -0.88
CCP110-202ENST00000396208 PPP1R1BQ9UD71 204 aaPredicted RBP9.58□□□□□ -0.88
CCP110-202ENST00000396208 ANKRD50Q9ULJ7 1429 aa9.58□□□□□ -0.88
CCP110-202ENST00000396208 CGNL1Q0VF96 1302 aa9.58□□□□□ -0.88
CCP110-202ENST00000396208 MINK1Q8N4C8 1332 aaPredicted RBP9.58□□□□□ -0.88
CCP110-202ENST00000396208 SMG6Q86US8 1419 aaKnown RBP9.57□□□□□ -0.88
CCP110-202ENST00000396208 KTN1Q86UP2 1357 aaKnown RBP9.57□□□□□ -0.88
CCP110-202ENST00000396208 KANK4Q5T7N3 995 aaPredicted RBP9.57□□□□□ -0.88
CCP110-202ENST00000396208 MSH6P52701 1360 aa9.57□□□□□ -0.88
CCP110-202ENST00000396208 ROCK1Q13464 1354 aa9.56□□□□□ -0.88
CCP110-202ENST00000396208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.56□□□□□ -0.88
CCP110-202ENST00000396208 NGLY1Q96IV0 654 aa9.56□□□□□ -0.88
CCP110-202ENST00000396208 NLRP2Q9NX02 1062 aa9.56□□□□□ -0.88
CCP110-202ENST00000396208 NCOA2Q15596 1464 aa9.56□□□□□ -0.88
CCP110-202ENST00000396208 IPO8O15397 1037 aaKnown RBP9.56□□□□□ -0.88
CCP110-202ENST00000396208 NEUROD2Q15784 382 aa9.56□□□□□ -0.88
CCP110-202ENST00000396208 U2AF1L5P0DN76 240 aaPredicted RBP9.56□□□□□ -0.88
CCP110-202ENST00000396208 U2AF1Q01081 240 aaKnown RBP eCLIP9.56□□□□□ -0.88
CCP110-202ENST00000396208 CNTLNQ9NXG0 1405 aa9.56□□□□□ -0.88
CCP110-202ENST00000396208 CFAP44Q96MT7 982 aa9.55□□□□□ -0.88
CCP110-202ENST00000396208 ZNF692Q9BU19 519 aaPredicted RBP9.55□□□□□ -0.88
CCP110-202ENST00000396208 EHBP1L1Q8N3D4 1523 aa9.55□□□□□ -0.88
CCP110-202ENST00000396208 CC2D1BQ5T0F9 858 aaKnown RBP9.55□□□□□ -0.88
CCP110-202ENST00000396208 PRDM11Q9NQV5 511 aa9.55□□□□□ -0.88
CCP110-202ENST00000396208 FAM135AQ9P2D6 1515 aa9.55□□□□□ -0.88
CCP110-202ENST00000396208 ZNF608Q9ULD9 1512 aaPredicted RBP9.55□□□□□ -0.88
CCP110-202ENST00000396208 HFM1A2PYH4 1435 aa9.54□□□□□ -0.88
CCP110-202ENST00000396208 CENPJQ9HC77 1338 aaPredicted RBP9.54□□□□□ -0.88
CCP110-202ENST00000396208 WWC1Q8IX03 1113 aa9.54□□□□□ -0.88
CCP110-202ENST00000396208 ASXL2Q76L83 1435 aa9.54□□□□□ -0.88
CCP110-202ENST00000396208 GORABQ5T7V8 394 aa9.54□□□□□ -0.88
CCP110-202ENST00000396208 WDR62O43379 1518 aa9.54□□□□□ -0.88
CCP110-202ENST00000396208 FRAT2O75474 233 aaPredicted RBP9.53□□□□□ -0.88
CCP110-202ENST00000396208 NLRP6P59044 892 aa9.53□□□□□ -0.88
CCP110-202ENST00000396208 UNC13AQ9UPW8 1703 aa9.53□□□□□ -0.88
CCP110-202ENST00000396208 ISY1Q9ULR0 285 aaKnown RBP9.53□□□□□ -0.88
CCP110-202ENST00000396208 WDR97A6NE52 1622 aa9.53□□□□□ -0.88
CCP110-202ENST00000396208 NOL10Q9BSC4 688 aaKnown RBP9.53□□□□□ -0.88
CCP110-202ENST00000396208 ABTB2Q8N961 1025 aa9.52□□□□□ -0.88
CCP110-202ENST00000396208 C9orf84Q5VXU9 1444 aa9.52□□□□□ -0.89
CCP110-202ENST00000396208 RALBP1Q15311 655 aa9.52□□□□□ -0.89
CCP110-202ENST00000396208 KIF14Q15058 1648 aa9.52□□□□□ -0.89
CCP110-202ENST00000396208 HSP90AB1P08238 724 aaKnown RBP9.52□□□□□ -0.89
CCP110-202ENST00000396208 TNRQ92752 1358 aa9.52□□□□□ -0.89
CCP110-202ENST00000396208 TATP17735 454 aaPredicted RBP9.52□□□□□ -0.89
CCP110-202ENST00000396208 ANKRD30BQ9BXX2 1392 aa9.51□□□□□ -0.89
CCP110-202ENST00000396208 NEXNQ0ZGT2 675 aa9.51□□□□□ -0.89
CCP110-202ENST00000396208 RTL5Q5HYW3 569 aaPredicted RBP9.51□□□□□ -0.89
CCP110-202ENST00000396208 UHRF1BP1Q6BDS2 1440 aa9.51□□□□□ -0.89
CCP110-202ENST00000396208 TOM1L2Q6ZVM7 507 aa9.51□□□□□ -0.89
CCP110-202ENST00000396208 STRN4Q9NRL3 753 aa9.51□□□□□ -0.89
CCP110-202ENST00000396208 FGD6Q6ZV73 1430 aa9.51□□□□□ -0.89
CCP110-202ENST00000396208 KCNH5Q8NCM2 988 aa9.51□□□□□ -0.89
CCP110-202ENST00000396208 NBPF8Q3BBV2 869 aa9.5□□□□□ -0.89
CCP110-202ENST00000396208 NBPF14Q5TI25 921 aa9.5□□□□□ -0.89
CCP110-202ENST00000396208 WDR7Q9Y4E6 1490 aa9.5□□□□□ -0.89
CCP110-202ENST00000396208 DDX58O95786 925 aaKnown RBP9.5□□□□□ -0.89
CCP110-202ENST00000396208 TRIM34Q9BYJ4 488 aa9.5□□□□□ -0.89
CCP110-202ENST00000396208 CCDC141Q6ZP82 1450 aa9.5□□□□□ -0.89
CCP110-202ENST00000396208 LMTK3Q96Q04 1460 aa9.5□□□□□ -0.89
CCP110-202ENST00000396208 DDRGK1Q96HY6 314 aa9.5□□□□□ -0.89
CCP110-202ENST00000396208 WDHD1O75717 1129 aaPredicted RBP9.49□□□□□ -0.89
CCP110-202ENST00000396208 AMOTL1Q8IY63 956 aa9.49□□□□□ -0.89
CCP110-202ENST00000396208 RBM33Q96EV2 1170 aaKnown RBP9.49□□□□□ -0.89
CCP110-202ENST00000396208 CWC22Q9HCG8 908 aaKnown RBP9.49□□□□□ -0.89
CCP110-202ENST00000396208 GPATCH3Q96I76 525 aa9.49□□□□□ -0.89
CCP110-202ENST00000396208 SLC26A8Q96RN1 970 aa9.49□□□□□ -0.89
CCP110-202ENST00000396208 PLEKHO1Q53GL0 409 aaPredicted RBP9.49□□□□□ -0.89
CCP110-202ENST00000396208 SIN3AQ96ST3 1273 aa9.49□□□□□ -0.89
CCP110-202ENST00000396208 FGD1P98174 961 aa9.48□□□□□ -0.89
CCP110-202ENST00000396208 CHMP3Q9Y3E7 222 aa9.48□□□□□ -0.89
CCP110-202ENST00000396208 RAB3GAP2Q9H2M9 1393 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms