RNA–Protein interactions for RNA: ENST00000396185.7

CTNNB1-203, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-203ENST00000396185 BLMP54132 1417 aaPredicted RBP16.33■□□□□ 0.2
CTNNB1-203ENST00000396185 PRAG1Q86YV5 1406 aa16.32■□□□□ 0.2
CTNNB1-203ENST00000396185 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
CTNNB1-203ENST00000396185 COL17A1Q9UMD9 1497 aaPredicted RBP16.31■□□□□ 0.2
CTNNB1-203ENST00000396185 B4GALNT3Q6L9W6 998 aa16.3■□□□□ 0.2
CTNNB1-203ENST00000396185 CARMIL2Q6F5E8 1435 aa16.3■□□□□ 0.2
CTNNB1-203ENST00000396185 PLEKHH2Q8IVE3 1493 aa16.3■□□□□ 0.2
CTNNB1-203ENST00000396185 RALBP1Q15311 655 aa16.3■□□□□ 0.2
CTNNB1-203ENST00000396185 MYBBP1AQ9BQG0 1328 aaKnown RBP16.29■□□□□ 0.2
CTNNB1-203ENST00000396185 SHROOM2Q13796 1616 aa16.29■□□□□ 0.2
CTNNB1-203ENST00000396185 WASHC2CQ9Y4E1 1318 aa16.29■□□□□ 0.2
CTNNB1-203ENST00000396185 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
CTNNB1-203ENST00000396185 CLASP1Q7Z460 1538 aa16.28■□□□□ 0.2
CTNNB1-203ENST00000396185 CCDC141Q6ZP82 1450 aa16.28■□□□□ 0.2
CTNNB1-203ENST00000396185 IQGAP1P46940 1657 aa16.28■□□□□ 0.2
CTNNB1-203ENST00000396185 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
CTNNB1-203ENST00000396185 PLA2R1Q13018 1463 aa16.27■□□□□ 0.19
CTNNB1-203ENST00000396185 PKD2Q13563 968 aa16.26■□□□□ 0.19
CTNNB1-203ENST00000396185 NOP58Q9Y2X3 529 aaKnown RBP16.26■□□□□ 0.19
CTNNB1-203ENST00000396185 PDE3BQ13370 1112 aa16.24■□□□□ 0.19
CTNNB1-203ENST00000396185 A2MP01023 1474 aa16.23■□□□□ 0.19
CTNNB1-203ENST00000396185 PER1O15534 1290 aaPredicted RBP16.22■□□□□ 0.19
CTNNB1-203ENST00000396185 IPO9Q96P70 1041 aaKnown RBP16.22■□□□□ 0.19
CTNNB1-203ENST00000396185 NUP155O75694 1391 aa16.21■□□□□ 0.19
CTNNB1-203ENST00000396185 KIAA1210Q9ULL0 1709 aa16.21■□□□□ 0.18
CTNNB1-203ENST00000396185 SPHKAPQ2M3C7 1700 aa16.2■□□□□ 0.18
CTNNB1-203ENST00000396185 MADDQ8WXG6 1647 aa16.2■□□□□ 0.18
CTNNB1-203ENST00000396185 CEP152O94986 1710 aa16.19■□□□□ 0.18
CTNNB1-203ENST00000396185 DEPDC5O75140 1603 aa16.19■□□□□ 0.18
CTNNB1-203ENST00000396185 MYOM1P52179 1685 aa16.19■□□□□ 0.18
CTNNB1-203ENST00000396185 RSPH4AQ5TD94 716 aa16.18■□□□□ 0.18
CTNNB1-203ENST00000396185 TTC37Q6PGP7 1564 aa16.18■□□□□ 0.18
CTNNB1-203ENST00000396185 RRP1P56182 461 aaKnown RBP16.18■□□□□ 0.18
CTNNB1-203ENST00000396185 SYNMO15061 1565 aa16.18■□□□□ 0.18
CTNNB1-203ENST00000396185 MS4A1P11836 297 aa16.17■□□□□ 0.18
CTNNB1-203ENST00000396185 DUOX2Q9NRD8 1548 aa16.17■□□□□ 0.18
CTNNB1-203ENST00000396185 ERBINQ96RT1 1412 aa16.16■□□□□ 0.18
CTNNB1-203ENST00000396185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.16■□□□□ 0.185e-8■■■■□ 19.5
CTNNB1-203ENST00000396185 PAK3O75914 559 aaPredicted RBP16.16■□□□□ 0.18
CTNNB1-203ENST00000396185 VIRMAQ69YN4 1812 aaKnown RBP16.15■□□□□ 0.18
CTNNB1-203ENST00000396185 ERICH6Q7L0X2 663 aa16.15■□□□□ 0.18
CTNNB1-203ENST00000396185 NLRP13Q86W25 1043 aa16.15■□□□□ 0.18
CTNNB1-203ENST00000396185 CARD11Q9BXL7 1154 aa16.15■□□□□ 0.18
CTNNB1-203ENST00000396185 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.17
CTNNB1-203ENST00000396185 SYCP2Q9BX26 1530 aa16.14■□□□□ 0.17
CTNNB1-203ENST00000396185 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
CTNNB1-203ENST00000396185 ABCC2Q92887 1545 aa16.13■□□□□ 0.17
CTNNB1-203ENST00000396185 ST20-MTHFSA0A0A6YYL1 179 aa16.13■□□□□ 0.17
CTNNB1-203ENST00000396185 TESK2Q96S53 571 aa16.13■□□□□ 0.17
CTNNB1-203ENST00000396185 WDR7Q9Y4E6 1490 aa16.12■□□□□ 0.17
CTNNB1-203ENST00000396185 DEKP35659 375 aaKnown RBP16.12■□□□□ 0.17
CTNNB1-203ENST00000396185 TMC1Q8TDI8 760 aa16.12■□□□□ 0.17
CTNNB1-203ENST00000396185 JPH4Q96JJ6 628 aa16.11■□□□□ 0.17
CTNNB1-203ENST00000396185 CCDC144AA2RUR9 1427 aa16.11■□□□□ 0.17
CTNNB1-203ENST00000396185 ARAP3Q8WWN8 1544 aa16.11■□□□□ 0.17
CTNNB1-203ENST00000396185 TRPM2O94759 1503 aa16.11■□□□□ 0.17
CTNNB1-203ENST00000396185 VWDEQ8N2E2 1590 aa16.1■□□□□ 0.17
CTNNB1-203ENST00000396185 SCAPERQ9BY12 1400 aa16.1■□□□□ 0.17
CTNNB1-203ENST00000396185 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
CTNNB1-203ENST00000396185 MYO3AQ8NEV4 1616 aa16.08■□□□□ 0.17
CTNNB1-203ENST00000396185 NPC1L1Q9UHC9 1359 aa16.08■□□□□ 0.17
CTNNB1-203ENST00000396185 PLEKHD1A6NEE1 506 aa16.08■□□□□ 0.16
CTNNB1-203ENST00000396185 IFT172Q9UG01 1749 aa16.08■□□□□ 0.16
CTNNB1-203ENST00000396185 BACH2Q9BYV9 841 aa16.07■□□□□ 0.16
CTNNB1-203ENST00000396185 RCAN3Q9UKA8 241 aa16.07■□□□□ 0.16
CTNNB1-203ENST00000396185 DISP3Q9P2K9 1392 aa16.07■□□□□ 0.16
CTNNB1-203ENST00000396185 ANP32AP39687 249 aaKnown RBP16.07■□□□□ 0.16
CTNNB1-203ENST00000396185 ABCC1P33527 1531 aa16.07■□□□□ 0.16
CTNNB1-203ENST00000396185 ARID3CA6NKF2 412 aa16.07■□□□□ 0.16
CTNNB1-203ENST00000396185 USP35Q9P2H5 1018 aa16.07■□□□□ 0.16
CTNNB1-203ENST00000396185 ZNF521Q96K83 1311 aa16.06■□□□□ 0.16
CTNNB1-203ENST00000396185 PTPRTO14522 1441 aa16.05■□□□□ 0.16
CTNNB1-203ENST00000396185 KDM2BQ8NHM5 1336 aa16.05■□□□□ 0.16
CTNNB1-203ENST00000396185 PIK3C2GO75747 1445 aa16.04■□□□□ 0.16
CTNNB1-203ENST00000396185 TET3O43151 1660 aa16.04■□□□□ 0.16
CTNNB1-203ENST00000396185 CHD1O14646 1710 aa16.04■□□□□ 0.16
CTNNB1-203ENST00000396185 TSPY4P0CV99 314 aa16.03■□□□□ 0.16
CTNNB1-203ENST00000396185 TSPY10P0CW01 314 aa16.03■□□□□ 0.16
CTNNB1-203ENST00000396185 DCAF11Q8TEB1 546 aa16.03■□□□□ 0.16
CTNNB1-203ENST00000396185 EXOC6Q8TAG9 804 aa16.02■□□□□ 0.15
CTNNB1-203ENST00000396185 UHRF1BP1LA0JNW5 1464 aa16.01■□□□□ 0.15
CTNNB1-203ENST00000396185 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
CTNNB1-203ENST00000396185 KDM5AP29375 1690 aaKnown RBP16■□□□□ 0.15
CTNNB1-203ENST00000396185 PDE4AP27815 886 aa16■□□□□ 0.15
CTNNB1-203ENST00000396185 STAC3Q96MF2 364 aa16■□□□□ 0.15
CTNNB1-203ENST00000396185 ZBTB47Q9UFB7 747 aaPredicted RBP16■□□□□ 0.15
CTNNB1-203ENST00000396185 RTEL1-TNFRSF6BF6WH68 1400 aa15.99■□□□□ 0.15
CTNNB1-203ENST00000396185 ARHGAP5Q13017 1502 aa15.99■□□□□ 0.15
CTNNB1-203ENST00000396185 CLTCL1P53675 1640 aa15.99■□□□□ 0.15
CTNNB1-203ENST00000396185 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
CTNNB1-203ENST00000396185 INO80Q9ULG1 1556 aaPredicted RBP15.98■□□□□ 0.15
CTNNB1-203ENST00000396185 TRMT2AQ8IZ69 625 aaKnown RBP15.98■□□□□ 0.15
CTNNB1-203ENST00000396185 ZFYVE16Q7Z3T8 1539 aa15.98■□□□□ 0.15
CTNNB1-203ENST00000396185 ZC3H13Q5T200 1668 aaKnown RBP15.98■□□□□ 0.15
CTNNB1-203ENST00000396185 ZCCHC11Q5TAX3 1644 aaKnown RBP15.97■□□□□ 0.15
CTNNB1-203ENST00000396185 USP32Q8NFA0 1604 aa15.97■□□□□ 0.15
CTNNB1-203ENST00000396185 ZNF777Q9ULD5 760 aaPredicted RBP15.97■□□□□ 0.15
CTNNB1-203ENST00000396185 MYOM2P54296 1465 aa15.96■□□□□ 0.15
CTNNB1-203ENST00000396185 HNRNPMP52272 730 aaKnown RBP eCLIP15.96■□□□□ 0.158e-8■■■□□ 18.5
CTNNB1-203ENST00000396185 PLCH2O75038 1416 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms