RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 USP35Q9P2H5 1018 aa11.58□□□□□ -0.55
BDNF-204ENST00000395980 LAMC1P11047 1609 aa11.58□□□□□ -0.56
BDNF-204ENST00000395980 ARHGEF5Q12774 1597 aa11.58□□□□□ -0.56
BDNF-204ENST00000395980 ABCC10Q5T3U5 1492 aa11.58□□□□□ -0.56
BDNF-204ENST00000395980 WASHC2CQ9Y4E1 1318 aa11.57□□□□□ -0.56
BDNF-204ENST00000395980 ZNF608Q9ULD9 1512 aaPredicted RBP11.57□□□□□ -0.56
BDNF-204ENST00000395980 PLEKHH2Q8IVE3 1493 aa11.57□□□□□ -0.56
BDNF-204ENST00000395980 TRPM1Q7Z4N2 1603 aa11.57□□□□□ -0.56
BDNF-204ENST00000395980 ST20-MTHFSA0A0A6YYL1 179 aa11.57□□□□□ -0.56
BDNF-204ENST00000395980 PLB1Q6P1J6 1458 aa11.56□□□□□ -0.56
BDNF-204ENST00000395980 EXOC6Q8TAG9 804 aa11.56□□□□□ -0.56
BDNF-204ENST00000395980 MAGI1Q96QZ7 1491 aaPredicted RBP11.56□□□□□ -0.56
BDNF-204ENST00000395980 BACH2Q9BYV9 841 aa11.55□□□□□ -0.56
BDNF-204ENST00000395980 GPRASP1Q5JY77 1395 aa11.55□□□□□ -0.56
BDNF-204ENST00000395980 BLMP54132 1417 aaPredicted RBP11.55□□□□□ -0.56
BDNF-204ENST00000395980 EIF4G3O43432 1585 aaKnown RBP11.55□□□□□ -0.56
BDNF-204ENST00000395980 PDE4AP27815 886 aa11.55□□□□□ -0.56
BDNF-204ENST00000395980 CARMIL2Q6F5E8 1435 aa11.55□□□□□ -0.56
BDNF-204ENST00000395980 PRAG1Q86YV5 1406 aa11.54□□□□□ -0.56
BDNF-204ENST00000395980 COL17A1Q9UMD9 1497 aaPredicted RBP11.54□□□□□ -0.56
BDNF-204ENST00000395980 ABCA8O94911 1581 aa11.53□□□□□ -0.56
BDNF-204ENST00000395980 CNGB1Q14028 1251 aaPredicted RBP11.53□□□□□ -0.56
BDNF-204ENST00000395980 PPM1GO15355 546 aaPredicted RBP11.53□□□□□ -0.56
BDNF-204ENST00000395980 ZNF777Q9ULD5 760 aaPredicted RBP11.53□□□□□ -0.56
BDNF-204ENST00000395980 FAM135AQ9P2D6 1515 aa11.52□□□□□ -0.57
BDNF-204ENST00000395980 PRDM15P57071 1507 aaPredicted RBP11.52□□□□□ -0.57
BDNF-204ENST00000395980 SYNJ2O15056 1496 aa11.51□□□□□ -0.57
BDNF-204ENST00000395980 EIF2AK4Q9P2K8 1649 aaKnown RBP11.51□□□□□ -0.57
BDNF-204ENST00000395980 PER1O15534 1290 aaPredicted RBP11.51□□□□□ -0.57
BDNF-204ENST00000395980 TSPY4P0CV99 314 aa11.51□□□□□ -0.57
BDNF-204ENST00000395980 TSPY10P0CW01 314 aa11.51□□□□□ -0.57
BDNF-204ENST00000395980 DCAF11Q8TEB1 546 aa11.51□□□□□ -0.57
BDNF-204ENST00000395980 DDRGK1Q96HY6 314 aa11.51□□□□□ -0.57
BDNF-204ENST00000395980 NUP160Q12769 1436 aa11.5□□□□□ -0.57
BDNF-204ENST00000395980 UNC13BO14795 1591 aa11.49□□□□□ -0.57
BDNF-204ENST00000395980 PLEKHD1A6NEE1 506 aa11.49□□□□□ -0.57
BDNF-204ENST00000395980 CCDC141Q6ZP82 1450 aa11.49□□□□□ -0.57
BDNF-204ENST00000395980 CCDC144AA2RUR9 1427 aa11.49□□□□□ -0.57
BDNF-204ENST00000395980 KDM2AQ9Y2K7 1162 aa11.48□□□□□ -0.57
BDNF-204ENST00000395980 MAST1Q9Y2H9 1570 aa11.48□□□□□ -0.57
BDNF-204ENST00000395980 ATP10BO94823 1461 aa11.48□□□□□ -0.57
BDNF-204ENST00000395980 DNAJC5BQ9UF47 199 aa11.48□□□□□ -0.57
BDNF-204ENST00000395980 RSPH4AQ5TD94 716 aa11.47□□□□□ -0.57
BDNF-204ENST00000395980 NPM2Q86SE8 214 aaKnown RBP11.47□□□□□ -0.57
BDNF-204ENST00000395980 NEFMP07197 916 aa11.46□□□□□ -0.57
BDNF-204ENST00000395980 PREX2Q70Z35 1606 aa11.46□□□□□ -0.57
BDNF-204ENST00000395980 A2MP01023 1474 aa11.46□□□□□ -0.57
BDNF-204ENST00000395980 SENP3-EIF4A1A0A087X0R7 540 aa11.46□□□□□ -0.58
BDNF-204ENST00000395980 ERBINQ96RT1 1412 aa11.45□□□□□ -0.58
BDNF-204ENST00000395980 SAMD9LQ8IVG5 1584 aa11.45□□□□□ -0.58
BDNF-204ENST00000395980 ATP10AO60312 1499 aa11.45□□□□□ -0.58
BDNF-204ENST00000395980 RNF17Q9BXT8 1623 aaKnown RBP11.45□□□□□ -0.58
BDNF-204ENST00000395980 IQGAP3Q86VI3 1631 aa11.45□□□□□ -0.58
BDNF-204ENST00000395980 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
BDNF-204ENST00000395980 TESK2Q96S53 571 aa11.44□□□□□ -0.58
BDNF-204ENST00000395980 CLASP1Q7Z460 1538 aa11.44□□□□□ -0.58
BDNF-204ENST00000395980 MYO5CQ9NQX4 1742 aa11.44□□□□□ -0.58
BDNF-204ENST00000395980 CRBNQ96SW2 442 aa11.44□□□□□ -0.58
BDNF-204ENST00000395980 PLA2R1Q13018 1463 aa11.43□□□□□ -0.58
BDNF-204ENST00000395980 KDM2BQ8NHM5 1336 aa11.43□□□□□ -0.58
BDNF-204ENST00000395980 JPH4Q96JJ6 628 aa11.43□□□□□ -0.58
BDNF-204ENST00000395980 DISP3Q9P2K9 1392 aa11.43□□□□□ -0.58
BDNF-204ENST00000395980 PLXNC1O60486 1568 aa11.43□□□□□ -0.58
BDNF-204ENST00000395980 CHMP7Q8WUX9 453 aaPredicted RBP11.43□□□□□ -0.58
BDNF-204ENST00000395980 CDC42BPBQ9Y5S2 1711 aa11.43□□□□□ -0.58
BDNF-204ENST00000395980 LAS1LQ9Y4W2 734 aaKnown RBP11.43□□□□□ -0.58
BDNF-204ENST00000395980 CENPQQ7L2Z9 268 aaPredicted RBP11.42□□□□□ -0.58
BDNF-204ENST00000395980 TMF1P82094 1093 aa11.41□□□□□ -0.58
BDNF-204ENST00000395980 SALL2Q9Y467 1007 aaPredicted RBP11.41□□□□□ -0.58
BDNF-204ENST00000395980 MAGI2Q86UL8 1455 aa11.4□□□□□ -0.58
BDNF-204ENST00000395980 NBPF1Q3BBV0 1214 aa11.4□□□□□ -0.58
BDNF-204ENST00000395980 HNRNPMP52272 730 aaKnown RBP eCLIP11.4□□□□□ -0.58
BDNF-204ENST00000395980 PANK3Q9H999 370 aa11.4□□□□□ -0.58
BDNF-204ENST00000395980 PLIN1O60240 522 aa11.39□□□□□ -0.59
BDNF-204ENST00000395980 CC2D1BQ5T0F9 858 aaKnown RBP11.39□□□□□ -0.59
BDNF-204ENST00000395980 EIF3AQ14152 1382 aaKnown RBP11.39□□□□□ -0.59
BDNF-204ENST00000395980 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.38□□□□□ -0.59
BDNF-204ENST00000395980 SYNMO15061 1565 aa11.38□□□□□ -0.59
BDNF-204ENST00000395980 ZNF521Q96K83 1311 aa11.38□□□□□ -0.59
BDNF-204ENST00000395980 WDR7Q9Y4E6 1490 aa11.38□□□□□ -0.59
BDNF-204ENST00000395980 IQGAP1P46940 1657 aa11.37□□□□□ -0.59
BDNF-204ENST00000395980 FAM161AQ3B820 660 aa11.37□□□□□ -0.59
BDNF-204ENST00000395980 PIK3C2GO75747 1445 aa11.37□□□□□ -0.59
BDNF-204ENST00000395980 SYCP2Q9BX26 1530 aa11.37□□□□□ -0.59
BDNF-204ENST00000395980 IL27Q8NEV9 243 aa11.37□□□□□ -0.59
BDNF-204ENST00000395980 DUOX2Q9NRD8 1548 aa11.37□□□□□ -0.59
BDNF-204ENST00000395980 DUSP27Q5VZP5 1158 aa11.37□□□□□ -0.59
BDNF-204ENST00000395980 NPC1L1Q9UHC9 1359 aa11.36□□□□□ -0.59
BDNF-204ENST00000395980 GSE1Q14687 1217 aa11.36□□□□□ -0.59
BDNF-204ENST00000395980 ABCC2Q92887 1545 aa11.35□□□□□ -0.59
BDNF-204ENST00000395980 PLEKHH1Q9ULM0 1364 aa11.35□□□□□ -0.59
BDNF-204ENST00000395980 NFKBIBQ15653 356 aa11.35□□□□□ -0.59
BDNF-204ENST00000395980 ADAMTS8Q9UP79 889 aa11.35□□□□□ -0.59
BDNF-204ENST00000395980 MADDQ8WXG6 1647 aa11.35□□□□□ -0.59
BDNF-204ENST00000395980 ERCC6Q03468 1493 aa11.34□□□□□ -0.59
BDNF-204ENST00000395980 RGL3Q3MIN7 710 aa11.34□□□□□ -0.59
BDNF-204ENST00000395980 DAXXQ9UER7 740 aaPredicted RBP11.34□□□□□ -0.59
BDNF-204ENST00000395980 ASXL1Q8IXJ9 1541 aa11.34□□□□□ -0.59
BDNF-204ENST00000395980 GOLGA2Q08379 1002 aa11.34□□□□□ -0.59
BDNF-204ENST00000395980 WDR43Q15061 677 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms