RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
GABRA1-202ENST00000393943 HSP90AB1P08238 724 aaKnown RBP10.94□□□□□ -0.66
GABRA1-202ENST00000393943 CASC1Q6TDU7 716 aa10.94□□□□□ -0.66
GABRA1-202ENST00000393943 ISY1Q9ULR0 285 aaKnown RBP10.94□□□□□ -0.66
GABRA1-202ENST00000393943 NCLP19338 710 aaKnown RBP10.93□□□□□ -0.66
GABRA1-202ENST00000393943 MSNP26038 577 aaKnown RBP10.93□□□□□ -0.66
GABRA1-202ENST00000393943 SKOR2Q2VWA4 1001 aaPredicted RBP10.93□□□□□ -0.66
GABRA1-202ENST00000393943 SENP3-EIF4A1A0A087X0R7 540 aa10.93□□□□□ -0.66
GABRA1-202ENST00000393943 C11orf95C9JLR9 678 aaPredicted RBP10.93□□□□□ -0.66
GABRA1-202ENST00000393943 PRKCSHP14314 528 aaPredicted RBP10.93□□□□□ -0.66
GABRA1-202ENST00000393943 CENPJQ9HC77 1338 aaPredicted RBP10.93□□□□□ -0.66
GABRA1-202ENST00000393943 DAPK1P53355 1430 aa10.93□□□□□ -0.66
GABRA1-202ENST00000393943 RAD54L2Q9Y4B4 1467 aa10.92□□□□□ -0.66
GABRA1-202ENST00000393943 FRAT1Q92837 279 aaPredicted RBP10.92□□□□□ -0.66
GABRA1-202ENST00000393943 NBPF8Q3BBV2 869 aa10.91□□□□□ -0.66
GABRA1-202ENST00000393943 ANKRD50Q9ULJ7 1429 aa10.91□□□□□ -0.66
GABRA1-202ENST00000393943 CCDC184Q52MB2 194 aa10.91□□□□□ -0.66
GABRA1-202ENST00000393943 KANK1Q14678 1352 aa10.9□□□□□ -0.66
GABRA1-202ENST00000393943 IPO8O15397 1037 aaKnown RBP10.9□□□□□ -0.66
GABRA1-202ENST00000393943 TOPBP1Q92547 1522 aa10.9□□□□□ -0.66
GABRA1-202ENST00000393943 HSP90AA2PQ14568 343 aaPredicted RBP10.9□□□□□ -0.66
GABRA1-202ENST00000393943 TCOF1Q13428 1488 aaKnown RBP10.9□□□□□ -0.66
GABRA1-202ENST00000393943 SLKQ9H2G2 1235 aaPredicted RBP10.9□□□□□ -0.66
GABRA1-202ENST00000393943 POLA1P09884 1462 aaPredicted RBP10.9□□□□□ -0.67
GABRA1-202ENST00000393943 PANK3Q9H999 370 aa10.89□□□□□ -0.67
GABRA1-202ENST00000393943 UGGT2Q9NYU1 1516 aa10.88□□□□□ -0.67
GABRA1-202ENST00000393943 RNF123Q5XPI4 1314 aa10.88□□□□□ -0.67
GABRA1-202ENST00000393943 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
GABRA1-202ENST00000393943 CHMP5Q9NZZ3 219 aa10.88□□□□□ -0.67
GABRA1-202ENST00000393943 EPRSP07814 1512 aaKnown RBP10.88□□□□□ -0.67
GABRA1-202ENST00000393943 CTTNBP2Q8WZ74 1663 aa10.87□□□□□ -0.67
GABRA1-202ENST00000393943 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
GABRA1-202ENST00000393943 PLIN1O60240 522 aa10.86□□□□□ -0.67
GABRA1-202ENST00000393943 MRE11P49959 708 aa10.86□□□□□ -0.67
GABRA1-202ENST00000393943 HAP1P54257 671 aaPredicted RBP10.86□□□□□ -0.67
GABRA1-202ENST00000393943 PDE3AQ14432 1141 aa10.86□□□□□ -0.67
GABRA1-202ENST00000393943 INSRP06213 1382 aa10.86□□□□□ -0.67
GABRA1-202ENST00000393943 KIF21AQ7Z4S6 1674 aa10.86□□□□□ -0.67
GABRA1-202ENST00000393943 GRIN2BQ13224 1484 aa10.86□□□□□ -0.67
GABRA1-202ENST00000393943 PTMAP06454 111 aaKnown RBP10.85□□□□□ -0.67
GABRA1-202ENST00000393943 MORC1Q86VD1 984 aa10.85□□□□□ -0.67
GABRA1-202ENST00000393943 SCAPERQ9BY12 1400 aa10.85□□□□□ -0.67
GABRA1-202ENST00000393943 TROQ12816 1431 aaPredicted RBP10.84□□□□□ -0.67
GABRA1-202ENST00000393943 PRDM2Q13029 1718 aa10.83□□□□□ -0.68
GABRA1-202ENST00000393943 CALD1Q05682 793 aaKnown RBP10.83□□□□□ -0.68
GABRA1-202ENST00000393943 CHGAP10645 457 aaKnown RBP10.83□□□□□ -0.68
GABRA1-202ENST00000393943 BRPF3Q9ULD4 1205 aa10.83□□□□□ -0.68
GABRA1-202ENST00000393943 SLC4A3P48751 1232 aa10.83□□□□□ -0.68
GABRA1-202ENST00000393943 CLUAP1Q96AJ1 413 aa10.83□□□□□ -0.68
GABRA1-202ENST00000393943 RALGAPBQ86X10 1494 aa10.82□□□□□ -0.68
GABRA1-202ENST00000393943 PTPRKQ15262 1439 aa10.82□□□□□ -0.68
GABRA1-202ENST00000393943 SNAPC4Q5SXM2 1469 aa10.82□□□□□ -0.68
GABRA1-202ENST00000393943 MAP7D2Q96T17 732 aa10.82□□□□□ -0.68
GABRA1-202ENST00000393943 GCC2Q8IWJ2 1684 aa10.82□□□□□ -0.68
GABRA1-202ENST00000393943 IQGAP2Q13576 1575 aa10.81□□□□□ -0.68
GABRA1-202ENST00000393943 NEUROD2Q15784 382 aa10.81□□□□□ -0.68
GABRA1-202ENST00000393943 TPM2P07951 284 aa10.81□□□□□ -0.68
GABRA1-202ENST00000393943 SYAP1Q96A49 352 aaPredicted RBP10.81□□□□□ -0.68
GABRA1-202ENST00000393943 ABCC5O15440 1437 aa10.81□□□□□ -0.68
GABRA1-202ENST00000393943 UBE2Q2Q8WVN8 375 aa10.8□□□□□ -0.68
GABRA1-202ENST00000393943 NESP48681 1621 aa10.8□□□□□ -0.68
GABRA1-202ENST00000393943 FRAT2O75474 233 aaPredicted RBP10.8□□□□□ -0.68
GABRA1-202ENST00000393943 DNTTIP2Q5QJE6 756 aaKnown RBP10.8□□□□□ -0.68
GABRA1-202ENST00000393943 MTERF4Q7Z6M4 381 aaKnown RBP10.8□□□□□ -0.68
GABRA1-202ENST00000393943 GZF1Q9H116 711 aaPredicted RBP10.79□□□□□ -0.68
GABRA1-202ENST00000393943 ARHGEF12Q9NZN5 1544 aa10.79□□□□□ -0.68
GABRA1-202ENST00000393943 MFAP1P55081 439 aaKnown RBP10.79□□□□□ -0.68
GABRA1-202ENST00000393943 CHAF1AQ13111 956 aaPredicted RBP10.79□□□□□ -0.68
GABRA1-202ENST00000393943 ZKSCAN2Q63HK3 967 aa10.79□□□□□ -0.68
GABRA1-202ENST00000393943 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.79□□□□□ -0.68
GABRA1-202ENST00000393943 RRP9O43818 475 aaKnown RBP10.78□□□□□ -0.68
GABRA1-202ENST00000393943 C9orf84Q5VXU9 1444 aa10.78□□□□□ -0.68
GABRA1-202ENST00000393943 MCCP23508 829 aa10.78□□□□□ -0.68
GABRA1-202ENST00000393943 CDCA7LQ96GN5 454 aa10.78□□□□□ -0.68
GABRA1-202ENST00000393943 DDX19BQ9UMR2 479 aa10.78□□□□□ -0.68
GABRA1-202ENST00000393943 CSPP1Q1MSJ5 1256 aa10.77□□□□□ -0.68
GABRA1-202ENST00000393943 ERBINQ96RT1 1412 aa10.77□□□□□ -0.69
GABRA1-202ENST00000393943 LRPPRCP42704 1394 aaKnown RBP10.77□□□□□ -0.69
GABRA1-202ENST00000393943 CT47B1P0C2W7 299 aaPredicted RBP10.77□□□□□ -0.69
GABRA1-202ENST00000393943 EFCAB2Q5VUJ9 269 aa10.77□□□□□ -0.69
GABRA1-202ENST00000393943 ADAMTS8Q9UP79 889 aa10.77□□□□□ -0.69
GABRA1-202ENST00000393943 ZNF644Q9H582 1327 aaPredicted RBP10.76□□□□□ -0.69
GABRA1-202ENST00000393943 APAF1O14727 1248 aa10.76□□□□□ -0.69
GABRA1-202ENST00000393943 ITPRIPQ8IWB1 547 aa10.76□□□□□ -0.69
GABRA1-202ENST00000393943 DHX29Q7Z478 1369 aaKnown RBP10.76□□□□□ -0.69
GABRA1-202ENST00000393943 KIAA2012Q0VF49 1180 aa10.76□□□□□ -0.69
GABRA1-202ENST00000393943 CIZ1Q9ULV3 898 aaPredicted RBP10.76□□□□□ -0.69
GABRA1-202ENST00000393943 PPP2R1AP30153 589 aa10.76□□□□□ -0.69
GABRA1-202ENST00000393943 SMC4Q9NTJ3 1288 aa10.76□□□□□ -0.69
GABRA1-202ENST00000393943 LAMC3Q9Y6N6 1575 aa10.75□□□□□ -0.69
GABRA1-202ENST00000393943 CAMSAP2Q08AD1 1489 aa10.75□□□□□ -0.69
GABRA1-202ENST00000393943 PHF14O94880 888 aa10.75□□□□□ -0.69
GABRA1-202ENST00000393943 CCDC146Q8IYE0 955 aa10.75□□□□□ -0.69
GABRA1-202ENST00000393943 SPRYD3Q8NCJ5 442 aa10.75□□□□□ -0.69
GABRA1-202ENST00000393943 C22orf23Q9BZE7 217 aa10.75□□□□□ -0.69
GABRA1-202ENST00000393943 COG6Q9Y2V7 657 aa10.75□□□□□ -0.69
GABRA1-202ENST00000393943 KIF14Q15058 1648 aa10.75□□□□□ -0.69
GABRA1-202ENST00000393943 HNRNPMP52272 730 aaKnown RBP eCLIP10.75□□□□□ -0.69
GABRA1-202ENST00000393943 RUNDC1Q96C34 613 aa10.75□□□□□ -0.69
GABRA1-202ENST00000393943 ITSN2Q9NZM3 1697 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms