RNA–Protein interactions for RNA: ENST00000393883.6

ZNF559-202, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-202ENST00000393883 MYOM3Q5VTT5 1437 aa18.34■□□□□ 0.53
ZNF559-202ENST00000393883 LTV1Q96GA3 475 aaPredicted RBP18.34■□□□□ 0.53
ZNF559-202ENST00000393883 PDE3BQ13370 1112 aa18.34■□□□□ 0.53
ZNF559-202ENST00000393883 CLSTN1O94985 981 aa18.32■□□□□ 0.52
ZNF559-202ENST00000393883 SMC4Q9NTJ3 1288 aa18.32■□□□□ 0.52
ZNF559-202ENST00000393883 ATF3P18847 181 aa18.32■□□□□ 0.52
ZNF559-202ENST00000393883 NUTM2FA1L443 756 aa18.31■□□□□ 0.52
ZNF559-202ENST00000393883 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
ZNF559-202ENST00000393883 TEFQ10587 303 aa18.3■□□□□ 0.52
ZNF559-202ENST00000393883 RCAN3Q9UKA8 241 aa18.3■□□□□ 0.52
ZNF559-202ENST00000393883 GRIN2BQ13224 1484 aa18.3■□□□□ 0.52
ZNF559-202ENST00000393883 PSME1Q06323 249 aa18.29■□□□□ 0.52
ZNF559-202ENST00000393883 PTMSP20962 102 aa18.29■□□□□ 0.52
ZNF559-202ENST00000393883 TTC5Q8N0Z6 440 aa18.29■□□□□ 0.52
ZNF559-202ENST00000393883 KIF15Q9NS87 1388 aa18.29■□□□□ 0.52
ZNF559-202ENST00000393883 TPRNQ4KMQ1 711 aa18.29■□□□□ 0.52
ZNF559-202ENST00000393883 DNTTIP2Q5QJE6 756 aaKnown RBP18.29■□□□□ 0.52
ZNF559-202ENST00000393883 CHMP4CQ96CF2 233 aa18.28■□□□□ 0.52
ZNF559-202ENST00000393883 RTN4Q9NQC3 1192 aaKnown RBP18.28■□□□□ 0.52
ZNF559-202ENST00000393883 DEKP35659 375 aaKnown RBP18.28■□□□□ 0.52
ZNF559-202ENST00000393883 APBB1O00213 710 aa18.27■□□□□ 0.52
ZNF559-202ENST00000393883 PLCB2Q00722 1185 aa18.26■□□□□ 0.51
ZNF559-202ENST00000393883 LRRFIP1Q32MZ4 808 aaKnown RBP18.26■□□□□ 0.51
ZNF559-202ENST00000393883 IGF1RP08069 1367 aa18.26■□□□□ 0.51
ZNF559-202ENST00000393883 NGEFQ8N5V2 710 aa18.26■□□□□ 0.51
ZNF559-202ENST00000393883 DHX57Q6P158 1386 aaKnown RBP18.25■□□□□ 0.51
ZNF559-202ENST00000393883 CHAF1AQ13111 956 aaPredicted RBP18.25■□□□□ 0.51
ZNF559-202ENST00000393883 TSHZ2Q9NRE2 1034 aa18.25■□□□□ 0.51
ZNF559-202ENST00000393883 NEXNQ0ZGT2 675 aa18.25■□□□□ 0.51
ZNF559-202ENST00000393883 CENPJQ9HC77 1338 aaPredicted RBP18.24■□□□□ 0.51
ZNF559-202ENST00000393883 SLC4A10Q6U841 1118 aa18.24■□□□□ 0.51
ZNF559-202ENST00000393883 KIF3AQ9Y496 699 aa18.24■□□□□ 0.51
ZNF559-202ENST00000393883 CUX1P39880 1505 aa18.23■□□□□ 0.51
ZNF559-202ENST00000393883 WASHC2AQ641Q2 1341 aa18.23■□□□□ 0.51
ZNF559-202ENST00000393883 MSH5O43196 834 aa18.22■□□□□ 0.51
ZNF559-202ENST00000393883 MINK1Q8N4C8 1332 aaPredicted RBP18.22■□□□□ 0.51
ZNF559-202ENST00000393883 RBM19Q9Y4C8 960 aaKnown RBP18.21■□□□□ 0.51
ZNF559-202ENST00000393883 MRC2Q9UBG0 1479 aa18.21■□□□□ 0.51
ZNF559-202ENST00000393883 SYNJ2O15056 1496 aa18.21■□□□□ 0.5
ZNF559-202ENST00000393883 MYBBP1AQ9BQG0 1328 aaKnown RBP18.2■□□□□ 0.5
ZNF559-202ENST00000393883 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
ZNF559-202ENST00000393883 KIAA2012Q0VF49 1180 aa18.2■□□□□ 0.5
ZNF559-202ENST00000393883 MIA2Q96PC5 1412 aa18.2■□□□□ 0.5
ZNF559-202ENST00000393883 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
ZNF559-202ENST00000393883 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
ZNF559-202ENST00000393883 NOL10Q9BSC4 688 aaKnown RBP18.19■□□□□ 0.5
ZNF559-202ENST00000393883 ST20-MTHFSA0A0A6YYL1 179 aa18.19■□□□□ 0.5
ZNF559-202ENST00000393883 DDX58O95786 925 aaKnown RBP18.18■□□□□ 0.5
ZNF559-202ENST00000393883 TRIM6-TRIM34B2RNG4 842 aa18.18■□□□□ 0.5
ZNF559-202ENST00000393883 AMOTL1Q8IY63 956 aa18.18■□□□□ 0.5
ZNF559-202ENST00000393883 AQRO60306 1485 aaKnown RBP eCLIP18.18■□□□□ 0.5
ZNF559-202ENST00000393883 B4GALNT3Q6L9W6 998 aa18.18■□□□□ 0.5
ZNF559-202ENST00000393883 RAPGEF4Q8WZA2 1011 aa18.17■□□□□ 0.5
ZNF559-202ENST00000393883 PANK3Q9H999 370 aa18.17■□□□□ 0.5
ZNF559-202ENST00000393883 GBP4Q96PP9 640 aa18.16■□□□□ 0.5
ZNF559-202ENST00000393883 CSPP1Q1MSJ5 1256 aa18.16■□□□□ 0.5
ZNF559-202ENST00000393883 POGZQ7Z3K3 1410 aa18.15■□□□□ 0.5
ZNF559-202ENST00000393883 PLEKHH2Q8IVE3 1493 aa18.15■□□□□ 0.5
ZNF559-202ENST00000393883 DIAPH1O60610 1272 aaKnown RBP18.15■□□□□ 0.5
ZNF559-202ENST00000393883 TPM4P67936 248 aa18.14■□□□□ 0.49
ZNF559-202ENST00000393883 SYAP1Q96A49 352 aaPredicted RBP18.14■□□□□ 0.49
ZNF559-202ENST00000393883 HSP90B1P14625 803 aaKnown RBP18.14■□□□□ 0.49
ZNF559-202ENST00000393883 THEMISQ8N1K5 641 aaPredicted RBP18.14■□□□□ 0.49
ZNF559-202ENST00000393883 GPRASP1Q5JY77 1395 aa18.14■□□□□ 0.49
ZNF559-202ENST00000393883 TCERG1O14776 1098 aaKnown RBP18.13■□□□□ 0.49
ZNF559-202ENST00000393883 HMGB2P26583 209 aaKnown RBP18.13■□□□□ 0.49
ZNF559-202ENST00000393883 TOMM22Q9NS69 142 aa18.13■□□□□ 0.49
ZNF559-202ENST00000393883 PRG4Q92954 1404 aaPredicted RBP18.12■□□□□ 0.49
ZNF559-202ENST00000393883 NOP58Q9Y2X3 529 aaKnown RBP18.12■□□□□ 0.49
ZNF559-202ENST00000393883 E9PSI1 815 aa18.12■□□□□ 0.49
ZNF559-202ENST00000393883 CCDC146Q8IYE0 955 aa18.12■□□□□ 0.49
ZNF559-202ENST00000393883 TRIM34Q9BYJ4 488 aa18.11■□□□□ 0.49
ZNF559-202ENST00000393883 ANO8Q9HCE9 1232 aaPredicted RBP18.1■□□□□ 0.49
ZNF559-202ENST00000393883 WWC1Q8IX03 1113 aa18.1■□□□□ 0.49
ZNF559-202ENST00000393883 ARHGAP5Q13017 1502 aa18.1■□□□□ 0.49
ZNF559-202ENST00000393883 USP47Q96K76 1375 aa18.1■□□□□ 0.49
ZNF559-202ENST00000393883 RASSF8Q8NHQ8 419 aa18.09■□□□□ 0.49
ZNF559-202ENST00000393883 MARCH6O60337 910 aa18.09■□□□□ 0.49
ZNF559-202ENST00000393883 DRC7Q8IY82 874 aa18.09■□□□□ 0.49
ZNF559-202ENST00000393883 FYCO1Q9BQS8 1478 aa18.09■□□□□ 0.49
ZNF559-202ENST00000393883 SYTL4Q96C24 671 aaPredicted RBP18.08■□□□□ 0.49
ZNF559-202ENST00000393883 ROCK1Q13464 1354 aa18.08■□□□□ 0.49
ZNF559-202ENST00000393883 ANKRD50Q9ULJ7 1429 aa18.08■□□□□ 0.48
ZNF559-202ENST00000393883 RRBP1Q9P2E9 1410 aaKnown RBP18.08■□□□□ 0.48
ZNF559-202ENST00000393883 C9orf78Q9NZ63 289 aaPredicted RBP18.08■□□□□ 0.48
ZNF559-202ENST00000393883 API5Q9BZZ5 524 aaKnown RBP18.07■□□□□ 0.48
ZNF559-202ENST00000393883 PRKCSHP14314 528 aaPredicted RBP18.07■□□□□ 0.48
ZNF559-202ENST00000393883 PROSER2Q86WR7 435 aaPredicted RBP18.07■□□□□ 0.48
ZNF559-202ENST00000393883 FGD6Q6ZV73 1430 aa18.07■□□□□ 0.48
ZNF559-202ENST00000393883 ZKSCAN2Q63HK3 967 aa18.07■□□□□ 0.48
ZNF559-202ENST00000393883 CTDP1Q9Y5B0 961 aaPredicted RBP18.07■□□□□ 0.48
ZNF559-202ENST00000393883 TXNDC2Q86VQ3 553 aa18.06■□□□□ 0.48
ZNF559-202ENST00000393883 CASKIN1Q8WXD9 1431 aa18.06■□□□□ 0.48
ZNF559-202ENST00000393883 KIF16BQ96L93 1317 aa18.05■□□□□ 0.48
ZNF559-202ENST00000393883 SYNE3Q6ZMZ3 975 aa18.05■□□□□ 0.48
ZNF559-202ENST00000393883 CPLX2Q6PUV4 134 aaKnown RBP18.05■□□□□ 0.48
ZNF559-202ENST00000393883 CFTRP13569 1480 aa18.05■□□□□ 0.48
ZNF559-202ENST00000393883 AKAP17AQ02040 695 aaKnown RBP18.05■□□□□ 0.48
ZNF559-202ENST00000393883 CLUAP1Q96AJ1 413 aa18.05■□□□□ 0.48
ZNF559-202ENST00000393883 PRDM2Q13029 1718 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms