RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 NOP58Q9Y2X3 529 aaKnown RBP8.98□□□□□ -0.97
DDX60-201ENST00000393743 TCERG1O14776 1098 aaKnown RBP8.98□□□□□ -0.97
DDX60-201ENST00000393743 CGNL1Q0VF96 1302 aa8.98□□□□□ -0.97
DDX60-201ENST00000393743 AEBP2Q6ZN18 517 aaPredicted RBP8.98□□□□□ -0.97
DDX60-201ENST00000393743 SMC4Q9NTJ3 1288 aa8.98□□□□□ -0.97
DDX60-201ENST00000393743 USP35Q9P2H5 1018 aa8.98□□□□□ -0.97
DDX60-201ENST00000393743 WASHC2AQ641Q2 1341 aa8.97□□□□□ -0.97
DDX60-201ENST00000393743 KIF15Q9NS87 1388 aa8.97□□□□□ -0.97
DDX60-201ENST00000393743 CHMP3Q9Y3E7 222 aa8.96□□□□□ -0.97
DDX60-201ENST00000393743 FHOD3Q2V2M9 1422 aa8.96□□□□□ -0.97
DDX60-201ENST00000393743 EVA1CP58658 441 aa8.96□□□□□ -0.98
DDX60-201ENST00000393743 HMGB2P26583 209 aaKnown RBP8.96□□□□□ -0.98
DDX60-201ENST00000393743 CENPJQ9HC77 1338 aaPredicted RBP8.96□□□□□ -0.98
DDX60-201ENST00000393743 KANK4Q5T7N3 995 aaPredicted RBP8.95□□□□□ -0.98
DDX60-201ENST00000393743 AMOTL1Q8IY63 956 aa8.95□□□□□ -0.98
DDX60-201ENST00000393743 FRAT2O75474 233 aaPredicted RBP8.95□□□□□ -0.98
DDX60-201ENST00000393743 NEXNQ0ZGT2 675 aa8.95□□□□□ -0.98
DDX60-201ENST00000393743 DRC7Q8IY82 874 aa8.95□□□□□ -0.98
DDX60-201ENST00000393743 TAOK2Q9UL54 1235 aa8.95□□□□□ -0.98
DDX60-201ENST00000393743 MSNP26038 577 aaKnown RBP8.95□□□□□ -0.98
DDX60-201ENST00000393743 TEFQ10587 303 aa8.94□□□□□ -0.98
DDX60-201ENST00000393743 NOL10Q9BSC4 688 aaKnown RBP8.94□□□□□ -0.98
DDX60-201ENST00000393743 TTC5Q8N0Z6 440 aa8.94□□□□□ -0.98
DDX60-201ENST00000393743 L3MBTL2Q969R5 705 aa8.94□□□□□ -0.98
DDX60-201ENST00000393743 MYOM3Q5VTT5 1437 aa8.93□□□□□ -0.98
DDX60-201ENST00000393743 TPRNQ4KMQ1 711 aa8.93□□□□□ -0.98
DDX60-201ENST00000393743 MYBBP1AQ9BQG0 1328 aaKnown RBP8.93□□□□□ -0.98
DDX60-201ENST00000393743 DDX58O95786 925 aaKnown RBP8.93□□□□□ -0.98
DDX60-201ENST00000393743 CPLX2Q6PUV4 134 aaKnown RBP8.92□□□□□ -0.98
DDX60-201ENST00000393743 HMGXB3Q12766 1538 aa8.92□□□□□ -0.98
DDX60-201ENST00000393743 HSP90B1P14625 803 aaKnown RBP8.92□□□□□ -0.98
DDX60-201ENST00000393743 ST18O60284 1047 aa8.92□□□□□ -0.98
DDX60-201ENST00000393743 CYB5RLQ6IPT4 315 aa8.92□□□□□ -0.98
DDX60-201ENST00000393743 ROCK1Q13464 1354 aa8.92□□□□□ -0.98
DDX60-201ENST00000393743 TRIM6-TRIM34B2RNG4 842 aa8.92□□□□□ -0.98
DDX60-201ENST00000393743 TRAK1Q9UPV9 953 aa8.92□□□□□ -0.98
DDX60-201ENST00000393743 PHF14O94880 888 aa8.91□□□□□ -0.98
DDX60-201ENST00000393743 RASSF8Q8NHQ8 419 aa8.91□□□□□ -0.98
DDX60-201ENST00000393743 KIF16BQ96L93 1317 aa8.91□□□□□ -0.98
DDX60-201ENST00000393743 GAPVD1Q14C86 1478 aa8.91□□□□□ -0.98
DDX60-201ENST00000393743 APBB1O00213 710 aa8.91□□□□□ -0.98
DDX60-201ENST00000393743 B4GALNT3Q6L9W6 998 aa8.91□□□□□ -0.98
DDX60-201ENST00000393743 ATP6V1DQ9Y5K8 247 aa8.91□□□□□ -0.98
DDX60-201ENST00000393743 MIA2Q96PC5 1412 aa8.91□□□□□ -0.98
DDX60-201ENST00000393743 MARCH6O60337 910 aa8.91□□□□□ -0.98
DDX60-201ENST00000393743 FOXD1Q16676 465 aa8.91□□□□□ -0.98
DDX60-201ENST00000393743 RUFY2Q8WXA3 655 aa8.91□□□□□ -0.98
DDX60-201ENST00000393743 CEP89Q96ST8 783 aa8.91□□□□□ -0.98
DDX60-201ENST00000393743 DHX57Q6P158 1386 aaKnown RBP8.9□□□□□ -0.98
DDX60-201ENST00000393743 E9PSI1 815 aa8.9□□□□□ -0.98
DDX60-201ENST00000393743 SLC4A10Q6U841 1118 aa8.9□□□□□ -0.98
DDX60-201ENST00000393743 SYNE3Q6ZMZ3 975 aa8.9□□□□□ -0.98
DDX60-201ENST00000393743 KIF21BO75037 1637 aa8.9□□□□□ -0.99
DDX60-201ENST00000393743 AKAP17AQ02040 695 aaKnown RBP8.9□□□□□ -0.99
DDX60-201ENST00000393743 ATF3P18847 181 aa8.89□□□□□ -0.99
DDX60-201ENST00000393743 AAMPQ13685 434 aa8.89□□□□□ -0.99
DDX60-201ENST00000393743 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.89□□□□□ -0.99
DDX60-201ENST00000393743 ERICH3Q5RHP9 1530 aa8.89□□□□□ -0.99
DDX60-201ENST00000393743 API5Q9BZZ5 524 aaKnown RBP8.89□□□□□ -0.99
DDX60-201ENST00000393743 DCAF8L1A6NGE4 600 aa8.89□□□□□ -0.99
DDX60-201ENST00000393743 CUX1P39880 1505 aa8.89□□□□□ -0.99
DDX60-201ENST00000393743 PSME1Q06323 249 aa8.89□□□□□ -0.99
DDX60-201ENST00000393743 HSP90AB4PQ58FF6 505 aa8.89□□□□□ -0.99
DDX60-201ENST00000393743 MEX3CQ5U5Q3 659 aaKnown RBP8.89□□□□□ -0.99
DDX60-201ENST00000393743 LTV1Q96GA3 475 aaPredicted RBP8.89□□□□□ -0.99
DDX60-201ENST00000393743 TRIM34Q9BYJ4 488 aa8.89□□□□□ -0.99
DDX60-201ENST00000393743 SENP3-EIF4A1A0A087X0R7 540 aa8.88□□□□□ -0.99
DDX60-201ENST00000393743 NAP1L5Q96NT1 182 aaPredicted RBP8.88□□□□□ -0.99
DDX60-201ENST00000393743 FAM69CQ0P6D2 419 aa8.88□□□□□ -0.99
DDX60-201ENST00000393743 TOMM22Q9NS69 142 aa8.88□□□□□ -0.99
DDX60-201ENST00000393743 ZKSCAN2Q63HK3 967 aa8.88□□□□□ -0.99
DDX60-201ENST00000393743 CTDP1Q9Y5B0 961 aaPredicted RBP8.88□□□□□ -0.99
DDX60-201ENST00000393743 NOC3LQ8WTT2 800 aaKnown RBP8.87□□□□□ -0.99
DDX60-201ENST00000393743 DIAPH1O60610 1272 aaKnown RBP8.87□□□□□ -0.99
DDX60-201ENST00000393743 CCDC47Q96A33 483 aaKnown RBP8.87□□□□□ -0.99
DDX60-201ENST00000393743 SF3A1Q15459 793 aaKnown RBP8.87□□□□□ -0.99
DDX60-201ENST00000393743 PEG3Q9GZU2 1588 aa8.86□□□□□ -0.99
DDX60-201ENST00000393743 TPM2P07951 284 aa8.86□□□□□ -0.99
DDX60-201ENST00000393743 RAPGEF4Q8WZA2 1011 aa8.86□□□□□ -0.99
DDX60-201ENST00000393743 TPM3P06753 285 aa8.86□□□□□ -0.99
DDX60-201ENST00000393743 PLEKHH2Q8IVE3 1493 aa8.85□□□□□ -0.99
DDX60-201ENST00000393743 CFTRP13569 1480 aa8.85□□□□□ -0.99
DDX60-201ENST00000393743 PANK3Q9H999 370 aa8.85□□□□□ -0.99
DDX60-201ENST00000393743 C9orf78Q9NZ63 289 aaPredicted RBP8.85□□□□□ -0.99
DDX60-201ENST00000393743 ST20-MTHFSA0A0A6YYL1 179 aa8.85□□□□□ -0.99
DDX60-201ENST00000393743 ZKSCAN1P17029 563 aaPredicted RBP8.84□□□□□ -0.99
DDX60-201ENST00000393743 TSR1Q2NL82 804 aaKnown RBP8.84□□□□□ -0.99
DDX60-201ENST00000393743 TCEAL9Q9UHQ7 104 aa8.84□□□□□ -0.99
DDX60-201ENST00000393743 CENPQQ7L2Z9 268 aaPredicted RBP8.84□□□□□ -0.99
DDX60-201ENST00000393743 DDX19BQ9UMR2 479 aa8.84□□□□□ -0.99
DDX60-201ENST00000393743 GPRASP1Q5JY77 1395 aa8.84□□□□□ -0.99
DDX60-201ENST00000393743 MSH5O43196 834 aa8.84□□□□□ -0.99
DDX60-201ENST00000393743 REC8O95072 547 aa8.84□□□□□ -0.99
DDX60-201ENST00000393743 RNF20Q5VTR2 975 aa8.84□□□□□ -0.99
DDX60-201ENST00000393743 GNAI1P63096 354 aa8.84□□□□□ -0.99
DDX60-201ENST00000393743 DIAPH3Q9NSV4 1193 aa8.84□□□□□ -0.99
DDX60-201ENST00000393743 TPM1P09493 284 aa8.84□□□□□ -0.99
DDX60-201ENST00000393743 NUTM2DQ5VT03 806 aaPredicted RBP8.84□□□□□ -0.99
DDX60-201ENST00000393743 FAM184AQ8NB25 1140 aa8.84□□□□□ -0.99
DDX60-201ENST00000393743 GRIN2BQ13224 1484 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms