RNA–Protein interactions for RNA: ENST00000393579.2

PCNPP3-201, Transcript of PEST containing nuclear protein pseudogene 3, humanhuman

BASIC

Gene PCNPP3, Length 471 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP3-201ENST00000393579 HPS5Q9UPZ3 1129 aa7.33□□□□□ -1.24
PCNPP3-201ENST00000393579 COL9A1P20849 921 aa7.32□□□□□ -1.24
PCNPP3-201ENST00000393579 LRCH3Q96II8 777 aa7.31□□□□□ -1.24
PCNPP3-201ENST00000393579 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.31□□□□□ -1.24
PCNPP3-201ENST00000393579 TSR3Q9UJK0 312 aaKnown RBP7.31□□□□□ -1.24
PCNPP3-201ENST00000393579 ANO8Q9HCE9 1232 aaPredicted RBP7.3□□□□□ -1.24
PCNPP3-201ENST00000393579 PDZRN3Q9UPQ7 1066 aa7.3□□□□□ -1.24
PCNPP3-201ENST00000393579 MAP3K9P80192 1104 aa7.29□□□□□ -1.24
PCNPP3-201ENST00000393579 FAM98CQ17RN3 349 aaKnown RBP7.26□□□□□ -1.25
PCNPP3-201ENST00000393579 PCDHGA10Q9Y5H3 936 aa7.26□□□□□ -1.25
PCNPP3-201ENST00000393579 PPP4CP60510 307 aa7.25□□□□□ -1.25
PCNPP3-201ENST00000393579 PPP1R18Q6NYC8 613 aa7.25□□□□□ -1.25
PCNPP3-201ENST00000393579 CRISPLD2Q9H0B8 497 aa7.25□□□□□ -1.25
PCNPP3-201ENST00000393579 V9GY48 417 aaPredicted RBP7.25□□□□□ -1.25
PCNPP3-201ENST00000393579 TYW1BQ6NUM6 668 aa7.24□□□□□ -1.25
PCNPP3-201ENST00000393579 PDE4AP27815 886 aa7.23□□□□□ -1.25
PCNPP3-201ENST00000393579 FBXW7Q969H0 707 aa7.23□□□□□ -1.25
PCNPP3-201ENST00000393579 PKD2Q13563 968 aa7.22□□□□□ -1.25
PCNPP3-201ENST00000393579 TRIM6-TRIM34B2RNG4 842 aa7.2□□□□□ -1.26
PCNPP3-201ENST00000393579 MTRQ99707 1265 aa7.2□□□□□ -1.26
PCNPP3-201ENST00000393579 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.2□□□□□ -1.26
PCNPP3-201ENST00000393579 ONECUT3O60422 494 aaPredicted RBP7.19□□□□□ -1.26
PCNPP3-201ENST00000393579 PHF14O94880 888 aa7.19□□□□□ -1.26
PCNPP3-201ENST00000393579 PKDCCQ504Y2 493 aa7.19□□□□□ -1.26
PCNPP3-201ENST00000393579 TJAP1Q5JTD0 557 aa7.19□□□□□ -1.26
PCNPP3-201ENST00000393579 HS6ST3Q8IZP7 471 aa7.19□□□□□ -1.26
PCNPP3-201ENST00000393579 RBM33Q96EV2 1170 aaKnown RBP7.19□□□□□ -1.26
PCNPP3-201ENST00000393579 DDX27Q96GQ7 796 aaKnown RBP7.19□□□□□ -1.26
PCNPP3-201ENST00000393579 LARP6Q9BRS8 491 aaKnown RBP7.19□□□□□ -1.26
PCNPP3-201ENST00000393579 IL21Q9HBE4 155 aa7.19□□□□□ -1.26
PCNPP3-201ENST00000393579 NCKAP5LQ9HCH0 1330 aa7.19□□□□□ -1.26
PCNPP3-201ENST00000393579 RNF40O75150 1001 aa7.18□□□□□ -1.26
PCNPP3-201ENST00000393579 C6orf132Q5T0Z8 1188 aa7.18□□□□□ -1.26
PCNPP3-201ENST00000393579 CHGAP10645 457 aaKnown RBP7.17□□□□□ -1.26
PCNPP3-201ENST00000393579 GGCXP38435 758 aa7.16□□□□□ -1.26
PCNPP3-201ENST00000393579 RYDENQ9NUL5 291 aaKnown RBP7.16□□□□□ -1.26
PCNPP3-201ENST00000393579 PACS2Q86VP3 889 aa7.15□□□□□ -1.26
PCNPP3-201ENST00000393579 ZNF516Q92618 1163 aa7.15□□□□□ -1.26
PCNPP3-201ENST00000393579 SAMD7Q7Z3H4 446 aa7.14□□□□□ -1.27
PCNPP3-201ENST00000393579 POTECB2RU33 542 aa7.13□□□□□ -1.27
PCNPP3-201ENST00000393579 EMILIN3Q9NT22 766 aa7.13□□□□□ -1.27
PCNPP3-201ENST00000393579 NKX2-3Q8TAU0 364 aa7.12□□□□□ -1.27
PCNPP3-201ENST00000393579 EPAS1Q99814 870 aa7.12□□□□□ -1.27
PCNPP3-201ENST00000393579 SMAPO00193 183 aa7.11□□□□□ -1.27
PCNPP3-201ENST00000393579 MYT1Q01538 1121 aa7.11□□□□□ -1.27
PCNPP3-201ENST00000393579 TREML4Q6UXN2 200 aa7.1□□□□□ -1.27
PCNPP3-201ENST00000393579 COPS2P61201 443 aa7.09□□□□□ -1.27
PCNPP3-201ENST00000393579 TSKSQ9UJT2 592 aa7.09□□□□□ -1.27
PCNPP3-201ENST00000393579 FAM187AA6NFU0 413 aa7.08□□□□□ -1.28
PCNPP3-201ENST00000393579 DGAT1O75907 488 aa7.08□□□□□ -1.28
PCNPP3-201ENST00000393579 NKX1-1Q15270 411 aaPredicted RBP7.08□□□□□ -1.28
PCNPP3-201ENST00000393579 DDX12PQ92771 950 aa7.08□□□□□ -1.28
PCNPP3-201ENST00000393579 MAP3K7O43318 606 aa7.07□□□□□ -1.28
PCNPP3-201ENST00000393579 HDGFP51858 240 aaKnown RBP7.07□□□□□ -1.28
PCNPP3-201ENST00000393579 SLC19A1P41440 591 aa7.06□□□□□ -1.28
PCNPP3-201ENST00000393579 APLP1P51693 650 aa7.06□□□□□ -1.28
PCNPP3-201ENST00000393579 NBR1Q14596 966 aa7.05□□□□□ -1.28
PCNPP3-201ENST00000393579 TSR1Q2NL82 804 aaKnown RBP7.05□□□□□ -1.28
PCNPP3-201ENST00000393579 TRIM67Q6ZTA4 783 aa7.05□□□□□ -1.28
PCNPP3-201ENST00000393579 MFSD10Q14728 455 aa7.04□□□□□ -1.28
PCNPP3-201ENST00000393579 PNMA3Q9UL41 463 aa7.04□□□□□ -1.28
PCNPP3-201ENST00000393579 TNFRSF10AO00220 468 aa7.03□□□□□ -1.28
PCNPP3-201ENST00000393579 DPYSL4O14531 572 aa7.03□□□□□ -1.28
PCNPP3-201ENST00000393579 ST8SIA5O15466 376 aa7.03□□□□□ -1.28
PCNPP3-201ENST00000393579 TMUB1Q9BVT8 246 aa7.03□□□□□ -1.28
PCNPP3-201ENST00000393579 NBPF26B4DH59 902 aa7.02□□□□□ -1.29
PCNPP3-201ENST00000393579 WFS1O76024 890 aa7.02□□□□□ -1.29
PCNPP3-201ENST00000393579 CDCA7LQ96GN5 454 aa7.02□□□□□ -1.29
PCNPP3-201ENST00000393579 STK17AQ9UEE5 414 aa7.02□□□□□ -1.29
PCNPP3-201ENST00000393579 EN1Q05925 392 aaPredicted RBP7□□□□□ -1.29
PCNPP3-201ENST00000393579 ZNF697Q5TEC3 545 aa7□□□□□ -1.29
PCNPP3-201ENST00000393579 TATDN2Q93075 761 aa7□□□□□ -1.29
PCNPP3-201ENST00000393579 RNF223E7ERA6 249 aa6.99□□□□□ -1.29
PCNPP3-201ENST00000393579 PRSS12P56730 875 aa6.99□□□□□ -1.29
PCNPP3-201ENST00000393579 INSM1Q01101 510 aaPredicted RBP6.99□□□□□ -1.29
PCNPP3-201ENST00000393579 LCE2AQ5TA79 106 aaPredicted RBP6.99□□□□□ -1.29
PCNPP3-201ENST00000393579 SPRYD7Q5W111 196 aa6.99□□□□□ -1.29
PCNPP3-201ENST00000393579 ZNF598Q86UK7 904 aaKnown RBP6.99□□□□□ -1.29
PCNPP3-201ENST00000393579 NECTIN2Q92692 538 aa6.99□□□□□ -1.29
PCNPP3-201ENST00000393579 ZPR1O75312 459 aa6.98□□□□□ -1.29
PCNPP3-201ENST00000393579 PRR20EP86478 221 aa6.98□□□□□ -1.29
PCNPP3-201ENST00000393579 PRR20CP86479 221 aa6.98□□□□□ -1.29
PCNPP3-201ENST00000393579 PRR20DP86480 221 aa6.98□□□□□ -1.29
PCNPP3-201ENST00000393579 PRR20BP86481 221 aa6.98□□□□□ -1.29
PCNPP3-201ENST00000393579 PRR20AP86496 221 aa6.98□□□□□ -1.29
PCNPP3-201ENST00000393579 AAASQ9NRG9 546 aa6.98□□□□□ -1.29
PCNPP3-201ENST00000393579 NUDT18Q6ZVK8 323 aa6.97□□□□□ -1.29
PCNPP3-201ENST00000393579 C3orf80F5H4A9 247 aa6.96□□□□□ -1.3
PCNPP3-201ENST00000393579 SLC4A3P48751 1232 aa6.96□□□□□ -1.3
PCNPP3-201ENST00000393579 FAM198AQ9UFP1 575 aa6.96□□□□□ -1.3
PCNPP3-201ENST00000393579 PPEF1O14829 653 aaPredicted RBP6.95□□□□□ -1.3
PCNPP3-201ENST00000393579 SLF2Q8IX21 1173 aa6.95□□□□□ -1.3
PCNPP3-201ENST00000393579 DNAJC5Q9H3Z4 198 aa6.95□□□□□ -1.3
PCNPP3-201ENST00000393579 PCDHB3Q9Y5E6 796 aa6.95□□□□□ -1.3
PCNPP3-201ENST00000393579 C11orf95C9JLR9 678 aaPredicted RBP6.94□□□□□ -1.3
PCNPP3-201ENST00000393579 SWT1Q5T5J6 900 aaKnown RBP6.94□□□□□ -1.3
PCNPP3-201ENST00000393579 EMID1Q96A84 441 aaPredicted RBP6.94□□□□□ -1.3
PCNPP3-201ENST00000393579 TLL1O43897 1013 aa6.93□□□□□ -1.3
PCNPP3-201ENST00000393579 CERKQ8TCT0 537 aa6.93□□□□□ -1.3
PCNPP3-201ENST00000393579 GTPBP6O43824 516 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms