RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 PDS5BQ9NTI5 1447 aa21.22■□□□□ 0.99
PHTF1-205ENST00000393357 EHBP1L1Q8N3D4 1523 aa21.21■□□□□ 0.99
PHTF1-205ENST00000393357 PDE3BQ13370 1112 aa21.21■□□□□ 0.99
PHTF1-205ENST00000393357 HNRNPMP52272 730 aaKnown RBP eCLIP21.21■□□□□ 0.99
PHTF1-205ENST00000393357 CENPQQ7L2Z9 268 aaPredicted RBP21.2■□□□□ 0.98
PHTF1-205ENST00000393357 COG6Q9Y2V7 657 aa21.2■□□□□ 0.98
PHTF1-205ENST00000393357 LRPPRCP42704 1394 aaKnown RBP21.2■□□□□ 0.98
PHTF1-205ENST00000393357 CLUAP1Q96AJ1 413 aa21.2■□□□□ 0.98
PHTF1-205ENST00000393357 RRAGDQ9NQL2 400 aaPredicted RBP21.2■□□□□ 0.98
PHTF1-205ENST00000393357 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
PHTF1-205ENST00000393357 ABCA5Q8WWZ7 1642 aa21.19■□□□□ 0.98
PHTF1-205ENST00000393357 PANK1Q8TE04 598 aa21.19■□□□□ 0.98
PHTF1-205ENST00000393357 MIA2Q96PC5 1412 aa21.19■□□□□ 0.98
PHTF1-205ENST00000393357 IGHDP01880 384 aa21.17■□□□□ 0.98
PHTF1-205ENST00000393357 SPINK5Q9NQ38 1064 aaPredicted RBP21.17■□□□□ 0.98
PHTF1-205ENST00000393357 LRRIQ1Q96JM4 1722 aa21.17■□□□□ 0.98
PHTF1-205ENST00000393357 APAF1O14727 1248 aa21.17■□□□□ 0.98
PHTF1-205ENST00000393357 VSIG10Q8N0Z9 540 aa21.17■□□□□ 0.98
PHTF1-205ENST00000393357 THOC2Q8NI27 1593 aaKnown RBP21.16■□□□□ 0.98
PHTF1-205ENST00000393357 EPRSP07814 1512 aaKnown RBP21.16■□□□□ 0.98
PHTF1-205ENST00000393357 PANK2Q9BZ23 570 aa21.16■□□□□ 0.98
PHTF1-205ENST00000393357 RRP7AQ9Y3A4 280 aaKnown RBP21.16■□□□□ 0.98
PHTF1-205ENST00000393357 TSPY4P0CV99 314 aa21.16■□□□□ 0.98
PHTF1-205ENST00000393357 TSPY10P0CW01 314 aa21.16■□□□□ 0.98
PHTF1-205ENST00000393357 GOLGA2Q08379 1002 aa21.15■□□□□ 0.98
PHTF1-205ENST00000393357 HECW1Q76N89 1606 aa21.15■□□□□ 0.98
PHTF1-205ENST00000393357 KNSTRNQ9Y448 316 aa21.14■□□□□ 0.97
PHTF1-205ENST00000393357 GAPVD1Q14C86 1478 aa21.14■□□□□ 0.97
PHTF1-205ENST00000393357 PRG4Q92954 1404 aaPredicted RBP21.13■□□□□ 0.97
PHTF1-205ENST00000393357 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.13■□□□□ 0.97
PHTF1-205ENST00000393357 KIAA1107Q9UPP5 1409 aa21.11■□□□□ 0.97
PHTF1-205ENST00000393357 DUSP27Q5VZP5 1158 aa21.11■□□□□ 0.97
PHTF1-205ENST00000393357 KIF21AQ7Z4S6 1674 aa21.11■□□□□ 0.97
PHTF1-205ENST00000393357 RSPH6AQ9H0K4 717 aa21.11■□□□□ 0.97
PHTF1-205ENST00000393357 PER1O15534 1290 aaPredicted RBP21.1■□□□□ 0.97
PHTF1-205ENST00000393357 KDM2BQ8NHM5 1336 aa21.1■□□□□ 0.97
PHTF1-205ENST00000393357 PLEKHH1Q9ULM0 1364 aa21.09■□□□□ 0.97
PHTF1-205ENST00000393357 PZPP20742 1482 aa21.09■□□□□ 0.97
PHTF1-205ENST00000393357 TNNQ9UQP3 1299 aa21.09■□□□□ 0.97
PHTF1-205ENST00000393357 DMRT2Q9Y5R5 561 aa21.09■□□□□ 0.97
PHTF1-205ENST00000393357 FAM43AQ8N2R8 423 aa21.08■□□□□ 0.97
PHTF1-205ENST00000393357 SAMD9Q5K651 1589 aa21.08■□□□□ 0.96
PHTF1-205ENST00000393357 DISP3Q9P2K9 1392 aa21.08■□□□□ 0.96
PHTF1-205ENST00000393357 ARID3AQ99856 593 aa21.06■□□□□ 0.96
PHTF1-205ENST00000393357 FOXD4L1Q9NU39 408 aa21.06■□□□□ 0.96
PHTF1-205ENST00000393357 TARBP1Q13395 1621 aaKnown RBP21.06■□□□□ 0.96
PHTF1-205ENST00000393357 BECN1Q14457 450 aa21.05■□□□□ 0.96
PHTF1-205ENST00000393357 ANKRD50Q9ULJ7 1429 aa21.04■□□□□ 0.96
PHTF1-205ENST00000393357 PNNQ9H307 717 aaKnown RBP21.04■□□□□ 0.96
PHTF1-205ENST00000393357 TMF1P82094 1093 aa21.04■□□□□ 0.96
PHTF1-205ENST00000393357 TCOF1Q13428 1488 aaKnown RBP21.03■□□□□ 0.96
PHTF1-205ENST00000393357 PPP2R1AP30153 589 aa21.03■□□□□ 0.96
PHTF1-205ENST00000393357 MFAP1P55081 439 aaKnown RBP21.02■□□□□ 0.96
PHTF1-205ENST00000393357 ANKRD30AQ9BXX3 1397 aa21.02■□□□□ 0.96
PHTF1-205ENST00000393357 UPF2Q9HAU5 1272 aaKnown RBP21.02■□□□□ 0.95
PHTF1-205ENST00000393357 GCC2Q8IWJ2 1684 aa21.01■□□□□ 0.95
PHTF1-205ENST00000393357 PKNOX2Q96KN3 472 aa21■□□□□ 0.95
PHTF1-205ENST00000393357 PARD3Q8TEW0 1356 aa21■□□□□ 0.95
PHTF1-205ENST00000393357 GOLGA6L3A6NEY3 463 aa20.99■□□□□ 0.95
PHTF1-205ENST00000393357 ZBTB7CA1YPR0 619 aa20.98■□□□□ 0.95
PHTF1-205ENST00000393357 XRCC6P12956 609 aaKnown RBP eCLIP20.98■□□□□ 0.95
PHTF1-205ENST00000393357 ROCK1Q13464 1354 aa20.97■□□□□ 0.95
PHTF1-205ENST00000393357 PLEKHD1A6NEE1 506 aa20.96■□□□□ 0.95
PHTF1-205ENST00000393357 KDM5CP41229 1560 aa20.95■□□□□ 0.94
PHTF1-205ENST00000393357 TBC1D2Q9BYX2 928 aa20.95■□□□□ 0.94
PHTF1-205ENST00000393357 USP19O94966 1318 aa20.94■□□□□ 0.94
PHTF1-205ENST00000393357 SLFN5Q08AF3 891 aa20.94■□□□□ 0.94
PHTF1-205ENST00000393357 HSP90AA2PQ14568 343 aaPredicted RBP20.94■□□□□ 0.94
PHTF1-205ENST00000393357 TESK2Q96S53 571 aa20.93■□□□□ 0.94
PHTF1-205ENST00000393357 ARHGEF11O15085 1522 aa20.92■□□□□ 0.94
PHTF1-205ENST00000393357 HSP90AA1P07900 732 aaKnown RBP20.91■□□□□ 0.94
PHTF1-205ENST00000393357 L1TD1Q5T7N2 865 aaKnown RBP20.91■□□□□ 0.94
PHTF1-205ENST00000393357 ZMYND15Q9H091 742 aa20.91■□□□□ 0.94
PHTF1-205ENST00000393357 PBRM1Q86U86 1689 aa20.91■□□□□ 0.94
PHTF1-205ENST00000393357 KIAA0586Q9BVV6 1533 aa20.91■□□□□ 0.94
PHTF1-205ENST00000393357 CAMSAP2Q08AD1 1489 aa20.9■□□□□ 0.94
PHTF1-205ENST00000393357 CENPJQ9HC77 1338 aaPredicted RBP20.89■□□□□ 0.94
PHTF1-205ENST00000393357 PDZRN3Q9UPQ7 1066 aa20.89■□□□□ 0.93
PHTF1-205ENST00000393357 PCDHB15Q9Y5E8 787 aa20.88■□□□□ 0.93
PHTF1-205ENST00000393357 CCDC144AA2RUR9 1427 aa20.88■□□□□ 0.93
PHTF1-205ENST00000393357 RALGAPBQ86X10 1494 aa20.88■□□□□ 0.93
PHTF1-205ENST00000393357 GLIPR1L2Q4G1C9 344 aa20.88■□□□□ 0.93
PHTF1-205ENST00000393357 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
PHTF1-205ENST00000393357 RLBP1P12271 317 aa20.87■□□□□ 0.93
PHTF1-205ENST00000393357 MRC2Q9UBG0 1479 aa20.87■□□□□ 0.93
PHTF1-205ENST00000393357 MBD5Q9P267 1494 aa20.86■□□□□ 0.93
PHTF1-205ENST00000393357 TRAK2O60296 914 aa20.86■□□□□ 0.93
PHTF1-205ENST00000393357 TRIM44Q96DX7 344 aaPredicted RBP20.85■□□□□ 0.93
PHTF1-205ENST00000393357 ADAMTS12P58397 1594 aa20.84■□□□□ 0.93
PHTF1-205ENST00000393357 PLB1Q6P1J6 1458 aa20.84■□□□□ 0.93
PHTF1-205ENST00000393357 MCM4P33991 863 aa20.83■□□□□ 0.93
PHTF1-205ENST00000393357 MYH16Q9H6N6 1097 aa20.83■□□□□ 0.92
PHTF1-205ENST00000393357 IQGAP2Q13576 1575 aa20.81■□□□□ 0.92
PHTF1-205ENST00000393357 ERBINQ96RT1 1412 aa20.81■□□□□ 0.92
PHTF1-205ENST00000393357 CHGAP10645 457 aaKnown RBP20.8■□□□□ 0.92
PHTF1-205ENST00000393357 KIF14Q15058 1648 aa20.8■□□□□ 0.92
PHTF1-205ENST00000393357 FTSJ3Q8IY81 847 aaKnown RBP20.8■□□□□ 0.92
PHTF1-205ENST00000393357 NUP153P49790 1475 aaKnown RBP20.79■□□□□ 0.92
PHTF1-205ENST00000393357 C9orf84Q5VXU9 1444 aa20.79■□□□□ 0.92
PHTF1-205ENST00000393357 NCLP19338 710 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms