RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 CDK13Q14004 1512 aaKnown RBP21.24■□□□□ 0.99
SCN3B-202ENST00000392770 TROQ12816 1431 aaPredicted RBP21.23■□□□□ 0.99
SCN3B-202ENST00000392770 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
SCN3B-202ENST00000392770 KIAA0586Q9BVV6 1533 aa21.22■□□□□ 0.99
SCN3B-202ENST00000392770 GOLGA2Q08379 1002 aa21.22■□□□□ 0.99
SCN3B-202ENST00000392770 ERICH6BQ5W0A0 696 aa21.21■□□□□ 0.99
SCN3B-202ENST00000392770 EVC2Q86UK5 1308 aa21.21■□□□□ 0.99
SCN3B-202ENST00000392770 NUTM2FA1L443 756 aa21.21■□□□□ 0.99
SCN3B-202ENST00000392770 IPO8O15397 1037 aaKnown RBP21.21■□□□□ 0.99
SCN3B-202ENST00000392770 NGDNQ8NEJ9 315 aaKnown RBP21.2■□□□□ 0.98
SCN3B-202ENST00000392770 C9orf84Q5VXU9 1444 aa21.2■□□□□ 0.98
SCN3B-202ENST00000392770 URB2Q14146 1524 aaKnown RBP21.2■□□□□ 0.98
SCN3B-202ENST00000392770 EPRSP07814 1512 aaKnown RBP21.19■□□□□ 0.98
SCN3B-202ENST00000392770 AFAP1Q8N556 730 aa21.18■□□□□ 0.98
SCN3B-202ENST00000392770 ITPRIPQ8IWB1 547 aa21.17■□□□□ 0.98
SCN3B-202ENST00000392770 DAPK1P53355 1430 aa21.17■□□□□ 0.98
SCN3B-202ENST00000392770 CCDC7Q96M83 1385 aa21.16■□□□□ 0.98
SCN3B-202ENST00000392770 PDE3BQ13370 1112 aa21.16■□□□□ 0.98
SCN3B-202ENST00000392770 MINK1Q8N4C8 1332 aaPredicted RBP21.16■□□□□ 0.98
SCN3B-202ENST00000392770 GOLGA6L22H0YM25 854 aa21.16■□□□□ 0.98
SCN3B-202ENST00000392770 CGNL1Q0VF96 1302 aa21.15■□□□□ 0.98
SCN3B-202ENST00000392770 CSB-PGBD3P0DP91 1061 aa21.15■□□□□ 0.98
SCN3B-202ENST00000392770 NCLP19338 710 aaKnown RBP21.15■□□□□ 0.98
SCN3B-202ENST00000392770 NOP58Q9Y2X3 529 aaKnown RBP21.15■□□□□ 0.98
SCN3B-202ENST00000392770 HFM1A2PYH4 1435 aa21.15■□□□□ 0.98
SCN3B-202ENST00000392770 KIF7Q2M1P5 1343 aa21.14■□□□□ 0.98
SCN3B-202ENST00000392770 PLEKHH2Q8IVE3 1493 aa21.14■□□□□ 0.97
SCN3B-202ENST00000392770 SMC4Q9NTJ3 1288 aa21.11■□□□□ 0.97
SCN3B-202ENST00000392770 RRP7AQ9Y3A4 280 aaKnown RBP21.11■□□□□ 0.97
SCN3B-202ENST00000392770 CNTLNQ9NXG0 1405 aa21.11■□□□□ 0.97
SCN3B-202ENST00000392770 AMPHP49418 695 aa21.1■□□□□ 0.97
SCN3B-202ENST00000392770 CENPJQ9HC77 1338 aaPredicted RBP21.1■□□□□ 0.97
SCN3B-202ENST00000392770 GRIN2AQ12879 1464 aa21.1■□□□□ 0.97
SCN3B-202ENST00000392770 KIAA1107Q9UPP5 1409 aa21.08■□□□□ 0.97
SCN3B-202ENST00000392770 HSP90AB1P08238 724 aaKnown RBP21.08■□□□□ 0.97
SCN3B-202ENST00000392770 ANP32EQ9BTT0 268 aa21.08■□□□□ 0.97
SCN3B-202ENST00000392770 RWDD1Q9H446 243 aaPredicted RBP21.08■□□□□ 0.97
SCN3B-202ENST00000392770 NPHP1O15259 732 aa21.08■□□□□ 0.96
SCN3B-202ENST00000392770 STAC3Q96MF2 364 aa21.07■□□□□ 0.96
SCN3B-202ENST00000392770 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
SCN3B-202ENST00000392770 RBM19Q9Y4C8 960 aaKnown RBP21.07■□□□□ 0.96
SCN3B-202ENST00000392770 APBB1O00213 710 aa21.06■□□□□ 0.96
SCN3B-202ENST00000392770 COG3Q96JB2 828 aa21.06■□□□□ 0.96
SCN3B-202ENST00000392770 ZBED9Q6R2W3 1325 aa21.06■□□□□ 0.96
SCN3B-202ENST00000392770 LMOD3Q0VAK6 560 aa21.05■□□□□ 0.96
SCN3B-202ENST00000392770 PTPN23Q9H3S7 1636 aa21.05■□□□□ 0.96
SCN3B-202ENST00000392770 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.05■□□□□ 0.96
SCN3B-202ENST00000392770 LTV1Q96GA3 475 aaPredicted RBP21.05■□□□□ 0.96
SCN3B-202ENST00000392770 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.04■□□□□ 0.96
SCN3B-202ENST00000392770 PMFBP1Q8TBY8 1022 aa21.04■□□□□ 0.96
SCN3B-202ENST00000392770 WASHC2AQ641Q2 1341 aa21.04■□□□□ 0.96
SCN3B-202ENST00000392770 TPRNQ4KMQ1 711 aa21.03■□□□□ 0.96
SCN3B-202ENST00000392770 ARHGEF11O15085 1522 aa21.02■□□□□ 0.96
SCN3B-202ENST00000392770 CLUAP1Q96AJ1 413 aa21.02■□□□□ 0.96
SCN3B-202ENST00000392770 STK31Q9BXU1 1019 aa21.02■□□□□ 0.96
SCN3B-202ENST00000392770 PLB1Q6P1J6 1458 aa21.02■□□□□ 0.96
SCN3B-202ENST00000392770 SCAPERQ9BY12 1400 aa21.01■□□□□ 0.95
SCN3B-202ENST00000392770 KCNJ4P48050 445 aa21.01■□□□□ 0.95
SCN3B-202ENST00000392770 HSCBQ8IWL3 235 aa21.01■□□□□ 0.95
SCN3B-202ENST00000392770 KIF14Q15058 1648 aa21■□□□□ 0.95
SCN3B-202ENST00000392770 ZNF608Q9ULD9 1512 aaPredicted RBP21■□□□□ 0.95
SCN3B-202ENST00000392770 MAP3K1Q13233 1512 aa21■□□□□ 0.95
SCN3B-202ENST00000392770 CAMSAP2Q08AD1 1489 aa21■□□□□ 0.95
SCN3B-202ENST00000392770 TCERG1O14776 1098 aaKnown RBP21■□□□□ 0.95
SCN3B-202ENST00000392770 TMEM132EQ6IEE7 984 aa20.99■□□□□ 0.95
SCN3B-202ENST00000392770 NAIPQ13075 1403 aa20.97■□□□□ 0.95
SCN3B-202ENST00000392770 E9PSI1 815 aa20.97■□□□□ 0.95
SCN3B-202ENST00000392770 ROCK1Q13464 1354 aa20.96■□□□□ 0.95
SCN3B-202ENST00000392770 CFAP44Q96MT7 982 aa20.95■□□□□ 0.94
SCN3B-202ENST00000392770 MCCP23508 829 aa20.95■□□□□ 0.94
SCN3B-202ENST00000392770 APAF1O14727 1248 aa20.95■□□□□ 0.94
SCN3B-202ENST00000392770 SPRYD3Q8NCJ5 442 aa20.95■□□□□ 0.94
SCN3B-202ENST00000392770 PLIN1O60240 522 aa20.94■□□□□ 0.94
SCN3B-202ENST00000392770 CFAP70Q5T0N1 1121 aa20.94■□□□□ 0.94
SCN3B-202ENST00000392770 NBPF8Q3BBV2 869 aa20.94■□□□□ 0.94
SCN3B-202ENST00000392770 CABP2Q9NPB3 220 aa20.94■□□□□ 0.94
SCN3B-202ENST00000392770 ZNF330Q9Y3S2 320 aaPredicted RBP20.94■□□□□ 0.94
SCN3B-202ENST00000392770 FGD1P98174 961 aa20.94■□□□□ 0.94
SCN3B-202ENST00000392770 RRP1P56182 461 aaKnown RBP20.94■□□□□ 0.94
SCN3B-202ENST00000392770 SLC4A10Q6U841 1118 aa20.93■□□□□ 0.94
SCN3B-202ENST00000392770 CCDC141Q6ZP82 1450 aa20.92■□□□□ 0.94
SCN3B-202ENST00000392770 DIAPH1O60610 1272 aaKnown RBP20.92■□□□□ 0.94
SCN3B-202ENST00000392770 NBPF1Q3BBV0 1214 aa20.92■□□□□ 0.94
SCN3B-202ENST00000392770 CHMP4AQ9BY43 222 aa20.92■□□□□ 0.94
SCN3B-202ENST00000392770 WDR97A6NE52 1622 aa20.92■□□□□ 0.94
SCN3B-202ENST00000392770 TRIM44Q96DX7 344 aaPredicted RBP20.91■□□□□ 0.94
SCN3B-202ENST00000392770 BCL2L13Q9BXK5 485 aa20.91■□□□□ 0.94
SCN3B-202ENST00000392770 TAOK2Q9UL54 1235 aa20.9■□□□□ 0.94
SCN3B-202ENST00000392770 NAP1L2Q9ULW6 460 aaPredicted RBP20.9■□□□□ 0.94
SCN3B-202ENST00000392770 ABCC5O15440 1437 aa20.89■□□□□ 0.94
SCN3B-202ENST00000392770 TSHZ2Q9NRE2 1034 aa20.89■□□□□ 0.93
SCN3B-202ENST00000392770 EXOC6Q8TAG9 804 aa20.88■□□□□ 0.93
SCN3B-202ENST00000392770 ELL2O00472 640 aaPredicted RBP20.87■□□□□ 0.93
SCN3B-202ENST00000392770 CRBNQ96SW2 442 aa20.87■□□□□ 0.93
SCN3B-202ENST00000392770 RAPGEF3O95398 923 aa20.86■□□□□ 0.93
SCN3B-202ENST00000392770 CCDC9Q9Y3X0 531 aaKnown RBP20.86■□□□□ 0.93
SCN3B-202ENST00000392770 ZRSR1Q15695 479 aaKnown RBP20.86■□□□□ 0.93
SCN3B-202ENST00000392770 HMMRO75330 724 aa20.86■□□□□ 0.93
SCN3B-202ENST00000392770 RUNDC1Q96C34 613 aa20.85■□□□□ 0.93
SCN3B-202ENST00000392770 BRD4O60885 1362 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms