RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 VGFO15240 615 aaPredicted RBP18.42■□□□□ 0.54
ZNF541-203ENST00000391901 ZBED9Q6R2W3 1325 aa18.42■□□□□ 0.54
ZNF541-203ENST00000391901 ITPRIPQ8IWB1 547 aa18.42■□□□□ 0.54
ZNF541-203ENST00000391901 WASHC2AQ641Q2 1341 aa18.42■□□□□ 0.54
ZNF541-203ENST00000391901 APBB1O00213 710 aa18.41■□□□□ 0.54
ZNF541-203ENST00000391901 SMC4Q9NTJ3 1288 aa18.4■□□□□ 0.54
ZNF541-203ENST00000391901 TPRNQ4KMQ1 711 aa18.4■□□□□ 0.54
ZNF541-203ENST00000391901 PLIN1O60240 522 aa18.39■□□□□ 0.54
ZNF541-203ENST00000391901 IPO9Q96P70 1041 aaKnown RBP18.39■□□□□ 0.53
ZNF541-203ENST00000391901 CENPJQ9HC77 1338 aaPredicted RBP18.38■□□□□ 0.53
ZNF541-203ENST00000391901 MRC2Q9UBG0 1479 aa18.38■□□□□ 0.53
ZNF541-203ENST00000391901 HSP90AB1P08238 724 aaKnown RBP18.38■□□□□ 0.53
ZNF541-203ENST00000391901 EFCAB5A4FU69 1503 aa18.38■□□□□ 0.53
ZNF541-203ENST00000391901 CALD1Q05682 793 aaKnown RBP18.38■□□□□ 0.53
ZNF541-203ENST00000391901 RWDD1Q9H446 243 aaPredicted RBP18.37■□□□□ 0.53
ZNF541-203ENST00000391901 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
ZNF541-203ENST00000391901 TRIM44Q96DX7 344 aaPredicted RBP18.37■□□□□ 0.53
ZNF541-203ENST00000391901 MINK1Q8N4C8 1332 aaPredicted RBP18.37■□□□□ 0.53
ZNF541-203ENST00000391901 SPRYD3Q8NCJ5 442 aa18.37■□□□□ 0.53
ZNF541-203ENST00000391901 EID1Q9Y6B2 187 aa18.36■□□□□ 0.53
ZNF541-203ENST00000391901 NGDNQ8NEJ9 315 aaKnown RBP18.36■□□□□ 0.53
ZNF541-203ENST00000391901 TIAM1Q13009 1591 aa18.36■□□□□ 0.53
ZNF541-203ENST00000391901 APAF1O14727 1248 aa18.35■□□□□ 0.53
ZNF541-203ENST00000391901 BCL2L13Q9BXK5 485 aa18.34■□□□□ 0.53
ZNF541-203ENST00000391901 NBPF8Q3BBV2 869 aa18.34■□□□□ 0.53
ZNF541-203ENST00000391901 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
ZNF541-203ENST00000391901 IFT140Q96RY7 1462 aa18.33■□□□□ 0.53
ZNF541-203ENST00000391901 EXOC6Q8TAG9 804 aa18.33■□□□□ 0.52
ZNF541-203ENST00000391901 CGNL1Q0VF96 1302 aa18.33■□□□□ 0.52
ZNF541-203ENST00000391901 DNMBPQ6XZF7 1577 aa18.33■□□□□ 0.52
ZNF541-203ENST00000391901 HFM1A2PYH4 1435 aa18.32■□□□□ 0.52
ZNF541-203ENST00000391901 HSCBQ8IWL3 235 aa18.32■□□□□ 0.52
ZNF541-203ENST00000391901 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
ZNF541-203ENST00000391901 CNTLNQ9NXG0 1405 aa18.31■□□□□ 0.52
ZNF541-203ENST00000391901 FANCIQ9NVI1 1328 aa18.31■□□□□ 0.52
ZNF541-203ENST00000391901 RRP1P56182 461 aaKnown RBP18.3■□□□□ 0.52
ZNF541-203ENST00000391901 KCNJ4P48050 445 aa18.3■□□□□ 0.52
ZNF541-203ENST00000391901 SNAPC4Q5SXM2 1469 aa18.3■□□□□ 0.52
ZNF541-203ENST00000391901 MIA2Q96PC5 1412 aa18.3■□□□□ 0.52
ZNF541-203ENST00000391901 TROQ12816 1431 aaPredicted RBP18.3■□□□□ 0.52
ZNF541-203ENST00000391901 NBPF1Q3BBV0 1214 aa18.29■□□□□ 0.52
ZNF541-203ENST00000391901 ELL2O00472 640 aaPredicted RBP18.29■□□□□ 0.52
ZNF541-203ENST00000391901 PMFBP1Q8TBY8 1022 aa18.29■□□□□ 0.52
ZNF541-203ENST00000391901 VSIG10Q8N0Z9 540 aa18.28■□□□□ 0.52
ZNF541-203ENST00000391901 LTV1Q96GA3 475 aaPredicted RBP18.28■□□□□ 0.52
ZNF541-203ENST00000391901 FAM69CQ0P6D2 419 aa18.28■□□□□ 0.52
ZNF541-203ENST00000391901 ABCA10Q8WWZ4 1543 aa18.28■□□□□ 0.52
ZNF541-203ENST00000391901 AMPHP49418 695 aa18.28■□□□□ 0.52
ZNF541-203ENST00000391901 EHBP1L1Q8N3D4 1523 aa18.28■□□□□ 0.52
ZNF541-203ENST00000391901 TMEM132EQ6IEE7 984 aa18.28■□□□□ 0.52
ZNF541-203ENST00000391901 ARHGAP5Q13017 1502 aa18.27■□□□□ 0.52
ZNF541-203ENST00000391901 CFAP70Q5T0N1 1121 aa18.27■□□□□ 0.51
ZNF541-203ENST00000391901 SLKQ9H2G2 1235 aaPredicted RBP18.26■□□□□ 0.51
ZNF541-203ENST00000391901 E9PSI1 815 aa18.26■□□□□ 0.51
ZNF541-203ENST00000391901 CSB-PGBD3P0DP91 1061 aa18.26■□□□□ 0.51
ZNF541-203ENST00000391901 CRBNQ96SW2 442 aa18.26■□□□□ 0.51
ZNF541-203ENST00000391901 STK31Q9BXU1 1019 aa18.25■□□□□ 0.51
ZNF541-203ENST00000391901 C9orf84Q5VXU9 1444 aa18.25■□□□□ 0.51
ZNF541-203ENST00000391901 FGD1P98174 961 aa18.24■□□□□ 0.51
ZNF541-203ENST00000391901 STAC3Q96MF2 364 aa18.24■□□□□ 0.51
ZNF541-203ENST00000391901 SLC4A10Q6U841 1118 aa18.24■□□□□ 0.51
ZNF541-203ENST00000391901 TAOK2Q9UL54 1235 aa18.23■□□□□ 0.51
ZNF541-203ENST00000391901 CDK13Q14004 1512 aaKnown RBP18.23■□□□□ 0.51
ZNF541-203ENST00000391901 COG6Q9Y2V7 657 aa18.23■□□□□ 0.51
ZNF541-203ENST00000391901 COG3Q96JB2 828 aa18.22■□□□□ 0.51
ZNF541-203ENST00000391901 NAIPQ13075 1403 aa18.22■□□□□ 0.51
ZNF541-203ENST00000391901 LMOD3Q0VAK6 560 aa18.22■□□□□ 0.51
ZNF541-203ENST00000391901 KIAA1107Q9UPP5 1409 aa18.22■□□□□ 0.51
ZNF541-203ENST00000391901 MFAP1P55081 439 aaKnown RBP18.22■□□□□ 0.51
ZNF541-203ENST00000391901 EPRSP07814 1512 aaKnown RBP18.21■□□□□ 0.51
ZNF541-203ENST00000391901 PKNOX2Q96KN3 472 aa18.2■□□□□ 0.5
ZNF541-203ENST00000391901 KIAA0586Q9BVV6 1533 aa18.2■□□□□ 0.5
ZNF541-203ENST00000391901 DAPK1P53355 1430 aa18.2■□□□□ 0.5
ZNF541-203ENST00000391901 PTMAP06454 111 aaKnown RBP18.19■□□□□ 0.5
ZNF541-203ENST00000391901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.19■□□□□ 0.5
ZNF541-203ENST00000391901 PDE4AP27815 886 aa18.18■□□□□ 0.5
ZNF541-203ENST00000391901 NAP1L2Q9ULW6 460 aaPredicted RBP18.18■□□□□ 0.5
ZNF541-203ENST00000391901 PEG3Q9GZU2 1588 aa18.18■□□□□ 0.5
ZNF541-203ENST00000391901 ADAMTS8Q9UP79 889 aa18.18■□□□□ 0.5
ZNF541-203ENST00000391901 MCCP23508 829 aa18.18■□□□□ 0.5
ZNF541-203ENST00000391901 CENPQQ7L2Z9 268 aaPredicted RBP18.17■□□□□ 0.5
ZNF541-203ENST00000391901 ZNF330Q9Y3S2 320 aaPredicted RBP18.17■□□□□ 0.5
ZNF541-203ENST00000391901 GGNBP2Q9H3C7 697 aa18.17■□□□□ 0.5
ZNF541-203ENST00000391901 CABP2Q9NPB3 220 aa18.17■□□□□ 0.5
ZNF541-203ENST00000391901 HECW1Q76N89 1606 aa18.17■□□□□ 0.5
ZNF541-203ENST00000391901 DIAPH1O60610 1272 aaKnown RBP18.16■□□□□ 0.5
ZNF541-203ENST00000391901 WDR97A6NE52 1622 aa18.16■□□□□ 0.5
ZNF541-203ENST00000391901 ZKSCAN2Q63HK3 967 aa18.16■□□□□ 0.5
ZNF541-203ENST00000391901 PCF11O94913 1555 aaKnown RBP18.16■□□□□ 0.5
ZNF541-203ENST00000391901 NPHP1O15259 732 aa18.16■□□□□ 0.5
ZNF541-203ENST00000391901 L1TD1Q5T7N2 865 aaKnown RBP18.16■□□□□ 0.5
ZNF541-203ENST00000391901 PLCB2Q00722 1185 aa18.15■□□□□ 0.5
ZNF541-203ENST00000391901 CFAP44Q96MT7 982 aa18.15■□□□□ 0.5
ZNF541-203ENST00000391901 RSPH6AQ9H0K4 717 aa18.15■□□□□ 0.5
ZNF541-203ENST00000391901 SCAPERQ9BY12 1400 aa18.15■□□□□ 0.5
ZNF541-203ENST00000391901 ZRSR1Q15695 479 aaKnown RBP18.15■□□□□ 0.5
ZNF541-203ENST00000391901 CCDC184Q52MB2 194 aa18.15■□□□□ 0.5
ZNF541-203ENST00000391901 CDCA7LQ96GN5 454 aa18.14■□□□□ 0.49
ZNF541-203ENST00000391901 BRD4O60885 1362 aaPredicted RBP18.13■□□□□ 0.49
ZNF541-203ENST00000391901 RIPK4P57078 832 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms