RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 DNTTIP2Q5QJE6 756 aaKnown RBP16.46■□□□□ 0.23
PCNX4-202ENST00000391611 L1TD1Q5T7N2 865 aaKnown RBP16.46■□□□□ 0.23
PCNX4-202ENST00000391611 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
PCNX4-202ENST00000391611 GSE1Q14687 1217 aa16.45■□□□□ 0.22
PCNX4-202ENST00000391611 NBPF1Q3BBV0 1214 aa16.45■□□□□ 0.22
PCNX4-202ENST00000391611 ADAMTS8Q9UP79 889 aa16.45■□□□□ 0.22
PCNX4-202ENST00000391611 PMFBP1Q8TBY8 1022 aa16.44■□□□□ 0.22
PCNX4-202ENST00000391611 PNISRQ8TF01 805 aaKnown RBP16.44■□□□□ 0.22
PCNX4-202ENST00000391611 USP35Q9P2H5 1018 aa16.44■□□□□ 0.22
PCNX4-202ENST00000391611 SPAG9O60271 1321 aaKnown RBP16.44■□□□□ 0.22
PCNX4-202ENST00000391611 CUX1P39880 1505 aa16.43■□□□□ 0.22
PCNX4-202ENST00000391611 ELL2O00472 640 aaPredicted RBP16.43■□□□□ 0.22
PCNX4-202ENST00000391611 RSPH4AQ5TD94 716 aa16.43■□□□□ 0.22
PCNX4-202ENST00000391611 IPO8O15397 1037 aaKnown RBP16.42■□□□□ 0.22
PCNX4-202ENST00000391611 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.22
PCNX4-202ENST00000391611 PNNQ9H307 717 aaKnown RBP16.4■□□□□ 0.22
PCNX4-202ENST00000391611 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
PCNX4-202ENST00000391611 HFM1A2PYH4 1435 aa16.39■□□□□ 0.21
PCNX4-202ENST00000391611 SKAP1Q86WV1 359 aa16.39■□□□□ 0.21
PCNX4-202ENST00000391611 TOP2BQ02880 1626 aa16.39■□□□□ 0.21
PCNX4-202ENST00000391611 E9PSI1 815 aa16.38■□□□□ 0.21
PCNX4-202ENST00000391611 TIAM1Q13009 1591 aa16.38■□□□□ 0.21
PCNX4-202ENST00000391611 ANKRD50Q9ULJ7 1429 aa16.37■□□□□ 0.21
PCNX4-202ENST00000391611 GOLGA6L3A6NEY3 463 aa16.37■□□□□ 0.21
PCNX4-202ENST00000391611 PANK1Q8TE04 598 aa16.37■□□□□ 0.21
PCNX4-202ENST00000391611 NFKBIBQ15653 356 aa16.37■□□□□ 0.21
PCNX4-202ENST00000391611 NAIPQ13075 1403 aa16.36■□□□□ 0.21
PCNX4-202ENST00000391611 LMOD2Q6P5Q4 547 aa16.36■□□□□ 0.21
PCNX4-202ENST00000391611 HDGFL2Q7Z4V5 671 aaPredicted RBP16.36■□□□□ 0.21
PCNX4-202ENST00000391611 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.35■□□□□ 0.21
PCNX4-202ENST00000391611 TAOK2Q9UL54 1235 aa16.35■□□□□ 0.21
PCNX4-202ENST00000391611 FYCO1Q9BQS8 1478 aa16.35■□□□□ 0.21
PCNX4-202ENST00000391611 IL27Q8NEV9 243 aa16.34■□□□□ 0.21
PCNX4-202ENST00000391611 EIF3AQ14152 1382 aaKnown RBP16.33■□□□□ 0.21
PCNX4-202ENST00000391611 CGNL1Q0VF96 1302 aa16.33■□□□□ 0.21
PCNX4-202ENST00000391611 GBP4Q96PP9 640 aa16.33■□□□□ 0.21
PCNX4-202ENST00000391611 BRD4O60885 1362 aaPredicted RBP16.33■□□□□ 0.2
PCNX4-202ENST00000391611 OS9Q13438 667 aaPredicted RBP16.33■□□□□ 0.2
PCNX4-202ENST00000391611 ARID3AQ99856 593 aa16.32■□□□□ 0.2
PCNX4-202ENST00000391611 PTPRGP23470 1445 aa16.32■□□□□ 0.2
PCNX4-202ENST00000391611 NESP48681 1621 aa16.32■□□□□ 0.2
PCNX4-202ENST00000391611 NUTM2FA1L443 756 aa16.31■□□□□ 0.2
PCNX4-202ENST00000391611 WASHC2CQ9Y4E1 1318 aa16.31■□□□□ 0.2
PCNX4-202ENST00000391611 MSNP26038 577 aaKnown RBP16.31■□□□□ 0.2
PCNX4-202ENST00000391611 BACH2Q9BYV9 841 aa16.3■□□□□ 0.2
PCNX4-202ENST00000391611 KCNJ4P48050 445 aa16.3■□□□□ 0.2
PCNX4-202ENST00000391611 ZKSCAN2Q63HK3 967 aa16.3■□□□□ 0.2
PCNX4-202ENST00000391611 A0A0G2JS52 829 aa16.29■□□□□ 0.2
PCNX4-202ENST00000391611 ANKRD45Q5TZF3 282 aa16.29■□□□□ 0.2
PCNX4-202ENST00000391611 NOL8Q76FK4 1167 aaKnown RBP16.29■□□□□ 0.2
PCNX4-202ENST00000391611 BRPF3Q9ULD4 1205 aa16.29■□□□□ 0.2
PCNX4-202ENST00000391611 FOXD4L5Q5VV16 416 aaPredicted RBP16.29■□□□□ 0.2
PCNX4-202ENST00000391611 FOXD4L4Q8WXT5 416 aaPredicted RBP16.29■□□□□ 0.2
PCNX4-202ENST00000391611 BCAR3O75815 825 aa16.29■□□□□ 0.2
PCNX4-202ENST00000391611 FRAT2O75474 233 aaPredicted RBP16.28■□□□□ 0.2
PCNX4-202ENST00000391611 SLC4A10Q6U841 1118 aa16.28■□□□□ 0.2
PCNX4-202ENST00000391611 TERF2IPQ9NYB0 399 aa16.28■□□□□ 0.2
PCNX4-202ENST00000391611 PPP2R1AP30153 589 aa16.27■□□□□ 0.2
PCNX4-202ENST00000391611 CFAP70Q5T0N1 1121 aa16.26■□□□□ 0.19
PCNX4-202ENST00000391611 RTF1Q92541 710 aaKnown RBP16.26■□□□□ 0.19
PCNX4-202ENST00000391611 TMEM132EQ6IEE7 984 aa16.25■□□□□ 0.19
PCNX4-202ENST00000391611 PRG4Q92954 1404 aaPredicted RBP16.25■□□□□ 0.19
PCNX4-202ENST00000391611 SMG6Q86US8 1419 aaKnown RBP16.25■□□□□ 0.19
PCNX4-202ENST00000391611 AFAP1Q8N556 730 aa16.24■□□□□ 0.19
PCNX4-202ENST00000391611 MINK1Q8N4C8 1332 aaPredicted RBP16.24■□□□□ 0.19
PCNX4-202ENST00000391611 DZIP1LQ8IYY4 767 aaKnown RBP16.23■□□□□ 0.19
PCNX4-202ENST00000391611 LNPKQ9C0E8 428 aa16.23■□□□□ 0.19
PCNX4-202ENST00000391611 FGD1P98174 961 aa16.23■□□□□ 0.19
PCNX4-202ENST00000391611 POLA1P09884 1462 aaPredicted RBP16.22■□□□□ 0.19
PCNX4-202ENST00000391611 MIA2Q96PC5 1412 aa16.22■□□□□ 0.19
PCNX4-202ENST00000391611 NAP1L2Q9ULW6 460 aaPredicted RBP16.22■□□□□ 0.19
PCNX4-202ENST00000391611 FOXD4L6Q3SYB3 417 aaPredicted RBP16.22■□□□□ 0.19
PCNX4-202ENST00000391611 C20orf194Q5TEA3 1177 aa16.22■□□□□ 0.19
PCNX4-202ENST00000391611 FOXD4L3Q6VB84 417 aaPredicted RBP16.22■□□□□ 0.19
PCNX4-202ENST00000391611 TCP11L2Q8N4U5 519 aa16.22■□□□□ 0.19
PCNX4-202ENST00000391611 CALD1Q05682 793 aaKnown RBP16.22■□□□□ 0.19
PCNX4-202ENST00000391611 KIAA1107Q9UPP5 1409 aa16.21■□□□□ 0.19
PCNX4-202ENST00000391611 MTHFSP49914 203 aa16.21■□□□□ 0.19
PCNX4-202ENST00000391611 MCCP23508 829 aa16.21■□□□□ 0.19
PCNX4-202ENST00000391611 ANO8Q9HCE9 1232 aaPredicted RBP16.21■□□□□ 0.19
PCNX4-202ENST00000391611 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.21■□□□□ 0.18
PCNX4-202ENST00000391611 TRIM6-TRIM34B2RNG4 842 aa16.2■□□□□ 0.18
PCNX4-202ENST00000391611 RIPK4P57078 832 aa16.2■□□□□ 0.18
PCNX4-202ENST00000391611 RUNDC1Q96C34 613 aa16.2■□□□□ 0.18
PCNX4-202ENST00000391611 GGNBP2Q9H3C7 697 aa16.2■□□□□ 0.18
PCNX4-202ENST00000391611 ANKRD30BQ9BXX2 1392 aa16.19■□□□□ 0.18
PCNX4-202ENST00000391611 GOLGA6L4A6NEF3 574 aa16.19■□□□□ 0.18
PCNX4-202ENST00000391611 HAP1P54257 671 aaPredicted RBP16.19■□□□□ 0.18
PCNX4-202ENST00000391611 DNAJC5BQ9UF47 199 aa16.19■□□□□ 0.18
PCNX4-202ENST00000391611 DDX49Q9Y6V7 483 aaKnown RBP16.19■□□□□ 0.18
PCNX4-202ENST00000391611 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
PCNX4-202ENST00000391611 ZRSR1Q15695 479 aaKnown RBP16.18■□□□□ 0.18
PCNX4-202ENST00000391611 MAPKBP1O60336 1514 aa16.17■□□□□ 0.18
PCNX4-202ENST00000391611 SLC12A5Q9H2X9 1139 aa16.17■□□□□ 0.18
PCNX4-202ENST00000391611 TOPBP1Q92547 1522 aa16.17■□□□□ 0.18
PCNX4-202ENST00000391611 PCF11O94913 1555 aaKnown RBP16.16■□□□□ 0.18
PCNX4-202ENST00000391611 EVC2Q86UK5 1308 aa16.16■□□□□ 0.18
PCNX4-202ENST00000391611 C22orf23Q9BZE7 217 aa16.16■□□□□ 0.18
PCNX4-202ENST00000391611 CDK13Q14004 1512 aaKnown RBP16.16■□□□□ 0.18
PCNX4-202ENST00000391611 DDX19BQ9UMR2 479 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms