RNA–Protein interactions for RNA: ENST00000390609.3

IGHV3-23-201, Transcript of immunoglobulin heavy variable 3-23, humanhuman

APPRIS P1 BASIC

Gene IGHV3-23, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-23-201ENST00000390609 SETD1BQ9UPS6 1966 aaKnown RBP24.58■■□□□ 1.53
IGHV3-23-201ENST00000390609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.57■■□□□ 1.52
IGHV3-23-201ENST00000390609 ANKRD30AQ9BXX3 1397 aa24.56■■□□□ 1.52
IGHV3-23-201ENST00000390609 KIF15Q9NS87 1388 aa24.55■■□□□ 1.52
IGHV3-23-201ENST00000390609 SOCS7O14512 581 aa24.55■■□□□ 1.52
IGHV3-23-201ENST00000390609 KIF3BO15066 747 aa24.55■■□□□ 1.52
IGHV3-23-201ENST00000390609 GGT6Q6P531 493 aa24.55■■□□□ 1.52
IGHV3-23-201ENST00000390609 PLXNC1O60486 1568 aa24.54■■□□□ 1.52
IGHV3-23-201ENST00000390609 PTPRTO14522 1441 aa24.52■■□□□ 1.52
IGHV3-23-201ENST00000390609 PTPRKQ15262 1439 aa24.52■■□□□ 1.52
IGHV3-23-201ENST00000390609 NCOA1Q15788 1441 aa24.5■■□□□ 1.51
IGHV3-23-201ENST00000390609 DUOX2Q9NRD8 1548 aa24.5■■□□□ 1.51
IGHV3-23-201ENST00000390609 C3P01024 1663 aa24.47■■□□□ 1.51
IGHV3-23-201ENST00000390609 ADGRL2O95490 1459 aa24.47■■□□□ 1.51
IGHV3-23-201ENST00000390609 ERBINQ96RT1 1412 aa24.42■■□□□ 1.5
IGHV3-23-201ENST00000390609 ROCK1Q13464 1354 aa24.42■■□□□ 1.5
IGHV3-23-201ENST00000390609 CNTLNQ9NXG0 1405 aa24.41■■□□□ 1.5
IGHV3-23-201ENST00000390609 LTBP4Q8N2S1 1624 aa24.4■■□□□ 1.5
IGHV3-23-201ENST00000390609 PPP6R1Q9UPN7 881 aa24.4■■□□□ 1.5
IGHV3-23-201ENST00000390609 SPATA31D1Q6ZQQ2 1576 aa24.39■■□□□ 1.5
IGHV3-23-201ENST00000390609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.39■■□□□ 1.49
IGHV3-23-201ENST00000390609 EIF2AK4Q9P2K8 1649 aaKnown RBP24.39■■□□□ 1.49
IGHV3-23-201ENST00000390609 WASHC2CQ9Y4E1 1318 aa24.38■■□□□ 1.49
IGHV3-23-201ENST00000390609 ANKRD50Q9ULJ7 1429 aa24.38■■□□□ 1.49
IGHV3-23-201ENST00000390609 IQSEC2Q5JU85 1478 aa24.36■■□□□ 1.49
IGHV3-23-201ENST00000390609 CLTCQ00610 1675 aaKnown RBP24.34■■□□□ 1.49
IGHV3-23-201ENST00000390609 RNF17Q9BXT8 1623 aaKnown RBP24.32■■□□□ 1.48
IGHV3-23-201ENST00000390609 ZMYM3Q14202 1370 aa24.32■■□□□ 1.48
IGHV3-23-201ENST00000390609 NPATQ14207 1427 aa24.31■■□□□ 1.48
IGHV3-23-201ENST00000390609 CAMSAP1Q5T5Y3 1602 aa24.31■■□□□ 1.48
IGHV3-23-201ENST00000390609 NCKAP5LQ9HCH0 1330 aa24.31■■□□□ 1.48
IGHV3-23-201ENST00000390609 KDM5DQ9BY66 1539 aa24.3■■□□□ 1.48
IGHV3-23-201ENST00000390609 KANK1Q14678 1352 aa24.3■■□□□ 1.48
IGHV3-23-201ENST00000390609 UBAP1LF5GYI3 381 aa24.27■■□□□ 1.48
IGHV3-23-201ENST00000390609 MROH1Q8NDA8 1641 aa24.27■■□□□ 1.48
IGHV3-23-201ENST00000390609 ZNF335Q9H4Z2 1342 aaPredicted RBP24.26■■□□□ 1.47
IGHV3-23-201ENST00000390609 FAM135AQ9P2D6 1515 aa24.25■■□□□ 1.47
IGHV3-23-201ENST00000390609 MROH2AA6NES4 1674 aa24.25■■□□□ 1.47
IGHV3-23-201ENST00000390609 NAIPQ13075 1403 aa24.25■■□□□ 1.47
IGHV3-23-201ENST00000390609 ABCC3O15438 1527 aa24.25■■□□□ 1.47
IGHV3-23-201ENST00000390609 PRDM15P57071 1507 aaPredicted RBP24.25■■□□□ 1.47
IGHV3-23-201ENST00000390609 PKD2Q13563 968 aa24.23■■□□□ 1.47
IGHV3-23-201ENST00000390609 DEPDC5O75140 1603 aa24.23■■□□□ 1.47
IGHV3-23-201ENST00000390609 HFM1A2PYH4 1435 aa24.21■■□□□ 1.47
IGHV3-23-201ENST00000390609 FBXO31Q5XUX0 539 aaPredicted RBP24.2■■□□□ 1.46
IGHV3-23-201ENST00000390609 ZC3H13Q5T200 1668 aaKnown RBP24.2■■□□□ 1.46
IGHV3-23-201ENST00000390609 CEP152O94986 1710 aa24.19■■□□□ 1.46
IGHV3-23-201ENST00000390609 GCC2Q8IWJ2 1684 aa24.18■■□□□ 1.46
IGHV3-23-201ENST00000390609 NUP155O75694 1391 aa24.17■■□□□ 1.46
IGHV3-23-201ENST00000390609 PZPP20742 1482 aa24.17■■□□□ 1.46
IGHV3-23-201ENST00000390609 PLA2R1Q13018 1463 aa24.17■■□□□ 1.46
IGHV3-23-201ENST00000390609 TRIM52Q96A61 297 aa24.15■■□□□ 1.46
IGHV3-23-201ENST00000390609 UNC13BO14795 1591 aa24.15■■□□□ 1.46
IGHV3-23-201ENST00000390609 VWDEQ8N2E2 1590 aa24.14■■□□□ 1.45
IGHV3-23-201ENST00000390609 MYO3AQ8NEV4 1616 aa24.13■■□□□ 1.45
IGHV3-23-201ENST00000390609 CEP170BQ9Y4F5 1589 aaPredicted RBP24.13■■□□□ 1.45
IGHV3-23-201ENST00000390609 ZNF142P52746 1687 aaPredicted RBP24.11■■□□□ 1.45
IGHV3-23-201ENST00000390609 LMTK2Q8IWU2 1503 aa24.11■■□□□ 1.45
IGHV3-23-201ENST00000390609 TNRQ92752 1358 aa24.11■■□□□ 1.45
IGHV3-23-201ENST00000390609 ARHGAP31Q2M1Z3 1444 aa24.1■■□□□ 1.45
IGHV3-23-201ENST00000390609 SETD5Q9C0A6 1442 aa24.09■■□□□ 1.45
IGHV3-23-201ENST00000390609 SCAF1Q9H7N4 1312 aaKnown RBP24.07■■□□□ 1.44
IGHV3-23-201ENST00000390609 ERVK-7P63135 1459 aa24.07■■□□□ 1.44
IGHV3-23-201ENST00000390609 EFCAB6Q5THR3 1501 aa24.06■■□□□ 1.44
IGHV3-23-201ENST00000390609 IQGAP3Q86VI3 1631 aa24.06■■□□□ 1.44
IGHV3-23-201ENST00000390609 TET3O43151 1660 aa24.04■■□□□ 1.44
IGHV3-23-201ENST00000390609 A2ML1A8K2U0 1454 aa24.03■■□□□ 1.44
IGHV3-23-201ENST00000390609 PIP4K2BP78356 416 aa24.03■■□□□ 1.44
IGHV3-23-201ENST00000390609 CFAP65Q6ZU64 1925 aaKnown RBP24.03■■□□□ 1.44
IGHV3-23-201ENST00000390609 TOM1O60784 492 aa24.02■■□□□ 1.44
IGHV3-23-201ENST00000390609 HSPA1LP34931 641 aa24.02■■□□□ 1.44
IGHV3-23-201ENST00000390609 RAB3GAP2Q9H2M9 1393 aa24.02■■□□□ 1.44
IGHV3-23-201ENST00000390609 SLC4A1APQ9BWU0 796 aaKnown RBP24.01■■□□□ 1.43
IGHV3-23-201ENST00000390609 TRIM26Q12899 539 aaPredicted RBP24■■□□□ 1.43
IGHV3-23-201ENST00000390609 RPRD2Q5VT52 1461 aaKnown RBP23.99■■□□□ 1.43
IGHV3-23-201ENST00000390609 NLRP1Q9C000 1473 aa23.97■■□□□ 1.43
IGHV3-23-201ENST00000390609 ACIN1Q9UKV3 1341 aaKnown RBP23.96■■□□□ 1.43
IGHV3-23-201ENST00000390609 E9PCH4 1651 aa23.95■■□□□ 1.43
IGHV3-23-201ENST00000390609 NOS1P29475 1434 aa23.95■■□□□ 1.42
IGHV3-23-201ENST00000390609 CPS1P31327 1500 aa23.94■■□□□ 1.42
IGHV3-23-201ENST00000390609 ANKLE2Q86XL3 938 aa23.94■■□□□ 1.42
IGHV3-23-201ENST00000390609 STAG3Q9UJ98 1225 aa23.94■■□□□ 1.42
IGHV3-23-201ENST00000390609 IDI1Q13907 227 aa23.92■■□□□ 1.42
IGHV3-23-201ENST00000390609 MPHOSPH9Q99550 1183 aa23.92■■□□□ 1.42
IGHV3-23-201ENST00000390609 THEMISQ8N1K5 641 aaPredicted RBP23.91■■□□□ 1.42
IGHV3-23-201ENST00000390609 SLC52A1Q9NWF4 448 aa23.91■■□□□ 1.42
IGHV3-23-201ENST00000390609 SYNMO15061 1565 aa23.91■■□□□ 1.42
IGHV3-23-201ENST00000390609 MED1Q15648 1581 aaPredicted RBP23.91■■□□□ 1.42
IGHV3-23-201ENST00000390609 UGGT1Q9NYU2 1555 aa23.91■■□□□ 1.42
IGHV3-23-201ENST00000390609 NEURL4Q96JN8 1562 aa23.9■■□□□ 1.42
IGHV3-23-201ENST00000390609 POLR1AO95602 1720 aaPredicted RBP23.9■■□□□ 1.42
IGHV3-23-201ENST00000390609 CHGAP10645 457 aaKnown RBP23.88■■□□□ 1.41
IGHV3-23-201ENST00000390609 FOXD1Q16676 465 aa23.88■■□□□ 1.41
IGHV3-23-201ENST00000390609 HRCP23327 699 aa23.87■■□□□ 1.41
IGHV3-23-201ENST00000390609 PHF23Q9BUL5 403 aaPredicted RBP23.86■■□□□ 1.41
IGHV3-23-201ENST00000390609 PIK3C2BO00750 1634 aa23.84■■□□□ 1.41
IGHV3-23-201ENST00000390609 NPHP4O75161 1426 aaPredicted RBP23.83■■□□□ 1.4
IGHV3-23-201ENST00000390609 SPHKAPQ2M3C7 1700 aa23.81■■□□□ 1.4
IGHV3-23-201ENST00000390609 UBR1Q8IWV7 1749 aa23.8■■□□□ 1.4
IGHV3-23-201ENST00000390609 SENP3Q9H4L4 574 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms