RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 SPDYE4A6NLX3 237 aa11.11□□□□□ -0.63
TRAV12-3-201ENST00000390442 MLH3Q9UHC1 1453 aa11.11□□□□□ -0.63
TRAV12-3-201ENST00000390442 KIDINS220Q9ULH0 1771 aa11.11□□□□□ -0.63
TRAV12-3-201ENST00000390442 PROM2Q8N271 834 aa11.1□□□□□ -0.63
TRAV12-3-201ENST00000390442 CCNB3Q8WWL7 1395 aa11.1□□□□□ -0.63
TRAV12-3-201ENST00000390442 SYCP2Q9BX26 1530 aa11.09□□□□□ -0.63
TRAV12-3-201ENST00000390442 APLP2Q06481 763 aa11.09□□□□□ -0.63
TRAV12-3-201ENST00000390442 C3P01024 1663 aa11.08□□□□□ -0.64
TRAV12-3-201ENST00000390442 DIP2CQ9Y2E4 1556 aa11.08□□□□□ -0.64
TRAV12-3-201ENST00000390442 CFDP1Q9UEE9 299 aaPredicted RBP11.08□□□□□ -0.64
TRAV12-3-201ENST00000390442 ABCA6Q8N139 1617 aa11.08□□□□□ -0.64
TRAV12-3-201ENST00000390442 HNRNPMP52272 730 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRAV12-3-201ENST00000390442 ESF1Q9H501 851 aaKnown RBP11.07□□□□□ -0.64
TRAV12-3-201ENST00000390442 SPINK5Q9NQ38 1064 aaPredicted RBP11.07□□□□□ -0.64
TRAV12-3-201ENST00000390442 PTPRTO14522 1441 aa11.07□□□□□ -0.64
TRAV12-3-201ENST00000390442 REREQ9P2R6 1566 aa11.07□□□□□ -0.64
TRAV12-3-201ENST00000390442 TPRNQ4KMQ1 711 aa11.06□□□□□ -0.64
TRAV12-3-201ENST00000390442 PLEKHH2Q8IVE3 1493 aa11.06□□□□□ -0.64
TRAV12-3-201ENST00000390442 ZNF777Q9ULD5 760 aaPredicted RBP11.05□□□□□ -0.64
TRAV12-3-201ENST00000390442 INO80Q9ULG1 1556 aaPredicted RBP11.05□□□□□ -0.64
TRAV12-3-201ENST00000390442 CAMSAP2Q08AD1 1489 aa11.05□□□□□ -0.64
TRAV12-3-201ENST00000390442 MYOM3Q5VTT5 1437 aa11.04□□□□□ -0.64
TRAV12-3-201ENST00000390442 MIA2Q96PC5 1412 aa11.03□□□□□ -0.64
TRAV12-3-201ENST00000390442 LTBP4Q8N2S1 1624 aa11.03□□□□□ -0.64
TRAV12-3-201ENST00000390442 IQSEC2Q5JU85 1478 aa11.03□□□□□ -0.64
TRAV12-3-201ENST00000390442 ARHGEF5Q12774 1597 aa11.03□□□□□ -0.64
TRAV12-3-201ENST00000390442 NCOA1Q15788 1441 aa11.02□□□□□ -0.64
TRAV12-3-201ENST00000390442 PKD2Q13563 968 aa11.02□□□□□ -0.65
TRAV12-3-201ENST00000390442 AGLP35573 1532 aa11.02□□□□□ -0.65
TRAV12-3-201ENST00000390442 ATP7AQ04656 1500 aa11.02□□□□□ -0.65
TRAV12-3-201ENST00000390442 PLXNC1O60486 1568 aa11.02□□□□□ -0.65
TRAV12-3-201ENST00000390442 IFNLR1Q8IU57 520 aaPredicted RBP11.01□□□□□ -0.65
TRAV12-3-201ENST00000390442 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.01□□□□□ -0.65
TRAV12-3-201ENST00000390442 RTEL1-TNFRSF6BF6WH68 1400 aa11.01□□□□□ -0.65
TRAV12-3-201ENST00000390442 CNTLNQ9NXG0 1405 aa11.01□□□□□ -0.65
TRAV12-3-201ENST00000390442 TCOF1Q13428 1488 aaKnown RBP11□□□□□ -0.65
TRAV12-3-201ENST00000390442 CAMSAP1Q5T5Y3 1602 aa11□□□□□ -0.65
TRAV12-3-201ENST00000390442 POLA2Q14181 598 aa10.99□□□□□ -0.65
TRAV12-3-201ENST00000390442 BBXQ8WY36 941 aaPredicted RBP10.99□□□□□ -0.65
TRAV12-3-201ENST00000390442 SPAG9O60271 1321 aaKnown RBP10.99□□□□□ -0.65
TRAV12-3-201ENST00000390442 CCDC141Q6ZP82 1450 aa10.99□□□□□ -0.65
TRAV12-3-201ENST00000390442 ADGBQ8N7X0 1667 aa10.98□□□□□ -0.65
TRAV12-3-201ENST00000390442 FGD6Q6ZV73 1430 aa10.98□□□□□ -0.65
TRAV12-3-201ENST00000390442 MAST1Q9Y2H9 1570 aa10.98□□□□□ -0.65
TRAV12-3-201ENST00000390442 PTPN23Q9H3S7 1636 aa10.98□□□□□ -0.65
TRAV12-3-201ENST00000390442 MROH2AA6NES4 1674 aa10.98□□□□□ -0.65
TRAV12-3-201ENST00000390442 RSPH4AQ5TD94 716 aa10.97□□□□□ -0.65
TRAV12-3-201ENST00000390442 ABCC5O15440 1437 aa10.96□□□□□ -0.65
TRAV12-3-201ENST00000390442 NPATQ14207 1427 aa10.96□□□□□ -0.65
TRAV12-3-201ENST00000390442 CAPN15O75808 1086 aa10.96□□□□□ -0.65
TRAV12-3-201ENST00000390442 KDM2AQ9Y2K7 1162 aa10.96□□□□□ -0.65
TRAV12-3-201ENST00000390442 A2MP01023 1474 aa10.95□□□□□ -0.66
TRAV12-3-201ENST00000390442 UBAP1LF5GYI3 381 aa10.95□□□□□ -0.66
TRAV12-3-201ENST00000390442 CROCC2H7BZ55 1655 aa10.95□□□□□ -0.66
TRAV12-3-201ENST00000390442 MYO3AQ8NEV4 1616 aa10.95□□□□□ -0.66
TRAV12-3-201ENST00000390442 ZNF335Q9H4Z2 1342 aaPredicted RBP10.94□□□□□ -0.66
TRAV12-3-201ENST00000390442 NCKAP5LQ9HCH0 1330 aa10.94□□□□□ -0.66
TRAV12-3-201ENST00000390442 ZNF142P52746 1687 aaPredicted RBP10.94□□□□□ -0.66
TRAV12-3-201ENST00000390442 CLTCQ00610 1675 aaKnown RBP10.94□□□□□ -0.66
TRAV12-3-201ENST00000390442 DNMT1P26358 1616 aaKnown RBP10.94□□□□□ -0.66
TRAV12-3-201ENST00000390442 ZMYM3Q14202 1370 aa10.93□□□□□ -0.66
TRAV12-3-201ENST00000390442 DHX29Q7Z478 1369 aaKnown RBP10.92□□□□□ -0.66
TRAV12-3-201ENST00000390442 CEP170BQ9Y4F5 1589 aaPredicted RBP10.92□□□□□ -0.66
TRAV12-3-201ENST00000390442 PLA2R1Q13018 1463 aa10.92□□□□□ -0.66
TRAV12-3-201ENST00000390442 SHANK2Q9UPX8 1470 aa10.92□□□□□ -0.66
TRAV12-3-201ENST00000390442 DAPK1P53355 1430 aa10.92□□□□□ -0.66
TRAV12-3-201ENST00000390442 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
TRAV12-3-201ENST00000390442 MROH1Q8NDA8 1641 aa10.89□□□□□ -0.67
TRAV12-3-201ENST00000390442 PPARGC1BQ86YN6 1023 aaKnown RBP10.89□□□□□ -0.67
TRAV12-3-201ENST00000390442 RNF17Q9BXT8 1623 aaKnown RBP10.87□□□□□ -0.67
TRAV12-3-201ENST00000390442 ADGRL2O95490 1459 aa10.87□□□□□ -0.67
TRAV12-3-201ENST00000390442 MED1Q15648 1581 aaPredicted RBP10.87□□□□□ -0.67
TRAV12-3-201ENST00000390442 ABCB7O75027 752 aa10.87□□□□□ -0.67
TRAV12-3-201ENST00000390442 TSPY4P0CV99 314 aa10.87□□□□□ -0.67
TRAV12-3-201ENST00000390442 TSPY10P0CW01 314 aa10.87□□□□□ -0.67
TRAV12-3-201ENST00000390442 GGT6Q6P531 493 aa10.87□□□□□ -0.67
TRAV12-3-201ENST00000390442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRAV12-3-201ENST00000390442 RRBP1Q9P2E9 1410 aaKnown RBP10.86□□□□□ -0.67
TRAV12-3-201ENST00000390442 PAXIP1Q6ZW49 1069 aaPredicted RBP10.86□□□□□ -0.67
TRAV12-3-201ENST00000390442 RNF39Q9H2S5 420 aa10.86□□□□□ -0.67
TRAV12-3-201ENST00000390442 EIF2AK4Q9P2K8 1649 aaKnown RBP10.86□□□□□ -0.67
TRAV12-3-201ENST00000390442 POLR1AO95602 1720 aaPredicted RBP10.86□□□□□ -0.67
TRAV12-3-201ENST00000390442 DUOX2Q9NRD8 1548 aa10.85□□□□□ -0.67
TRAV12-3-201ENST00000390442 PIP4K2BP78356 416 aa10.85□□□□□ -0.67
TRAV12-3-201ENST00000390442 A2ML1A8K2U0 1454 aa10.85□□□□□ -0.67
TRAV12-3-201ENST00000390442 KIF3BO15066 747 aa10.84□□□□□ -0.67
TRAV12-3-201ENST00000390442 HSPA1LP34931 641 aa10.84□□□□□ -0.67
TRAV12-3-201ENST00000390442 DEPDC5O75140 1603 aa10.84□□□□□ -0.67
TRAV12-3-201ENST00000390442 KIF15Q9NS87 1388 aa10.83□□□□□ -0.68
TRAV12-3-201ENST00000390442 TOM1O60784 492 aa10.83□□□□□ -0.68
TRAV12-3-201ENST00000390442 CPS1P31327 1500 aa10.83□□□□□ -0.68
TRAV12-3-201ENST00000390442 KDM5DQ9BY66 1539 aa10.83□□□□□ -0.68
TRAV12-3-201ENST00000390442 FAM135AQ9P2D6 1515 aa10.83□□□□□ -0.68
TRAV12-3-201ENST00000390442 ERBINQ96RT1 1412 aa10.82□□□□□ -0.68
TRAV12-3-201ENST00000390442 VWDEQ8N2E2 1590 aa10.82□□□□□ -0.68
TRAV12-3-201ENST00000390442 ABCC3O15438 1527 aa10.81□□□□□ -0.68
TRAV12-3-201ENST00000390442 PRDM15P57071 1507 aaPredicted RBP10.81□□□□□ -0.68
TRAV12-3-201ENST00000390442 FAM50AQ14320 339 aaKnown RBP10.81□□□□□ -0.68
TRAV12-3-201ENST00000390442 CFAP44Q96MT7 982 aa10.81□□□□□ -0.68
TRAV12-3-201ENST00000390442 RRP7BPQ9NSQ0 103 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms