RNA–Protein interactions for RNA: ENST00000390431.3

TRAV9-1-201, Transcript of T cell receptor alpha variable 9-1, humanhuman

APPRIS P1 BASIC

Gene TRAV9-1, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1-201ENST00000390431 CLASP1Q7Z460 1538 aa9.72□□□□□ -0.85
TRAV9-1-201ENST00000390431 NKX1-1Q15270 411 aaPredicted RBP9.71□□□□□ -0.86
TRAV9-1-201ENST00000390431 PBRM1Q86U86 1689 aa9.71□□□□□ -0.86
TRAV9-1-201ENST00000390431 CHMP7Q8WUX9 453 aaPredicted RBP9.7□□□□□ -0.86
TRAV9-1-201ENST00000390431 SYNJ1O43426 1573 aa9.7□□□□□ -0.86
TRAV9-1-201ENST00000390431 ARAP1Q96P48 1450 aa9.68□□□□□ -0.86
TRAV9-1-201ENST00000390431 LHX6Q9UPM6 363 aa9.68□□□□□ -0.86
TRAV9-1-201ENST00000390431 SLC34A2O95436 690 aa9.67□□□□□ -0.86
TRAV9-1-201ENST00000390431 CYB5RLQ6IPT4 315 aa9.65□□□□□ -0.86
TRAV9-1-201ENST00000390431 ANKRD13DQ6ZTN6 518 aa9.65□□□□□ -0.86
TRAV9-1-201ENST00000390431 PLPP6Q8IY26 295 aa9.65□□□□□ -0.86
TRAV9-1-201ENST00000390431 ADAMTS12P58397 1594 aa9.64□□□□□ -0.87
TRAV9-1-201ENST00000390431 DSG2Q14126 1118 aa9.64□□□□□ -0.87
TRAV9-1-201ENST00000390431 ERICH3Q5RHP9 1530 aa9.64□□□□□ -0.87
TRAV9-1-201ENST00000390431 GRIN2AQ12879 1464 aa9.64□□□□□ -0.87
TRAV9-1-201ENST00000390431 FOXK1P85037 733 aa9.63□□□□□ -0.87
TRAV9-1-201ENST00000390431 RNF166Q96A37 237 aaPredicted RBP9.63□□□□□ -0.87
TRAV9-1-201ENST00000390431 GPHNQ9NQX3 736 aaPredicted RBP9.63□□□□□ -0.87
TRAV9-1-201ENST00000390431 MYT1LQ9UL68 1186 aa9.63□□□□□ -0.87
TRAV9-1-201ENST00000390431 FHAD1B1AJZ9 1412 aa9.63□□□□□ -0.87
TRAV9-1-201ENST00000390431 NUP160Q12769 1436 aa9.63□□□□□ -0.87
TRAV9-1-201ENST00000390431 AXIN2Q9Y2T1 843 aa9.62□□□□□ -0.87
TRAV9-1-201ENST00000390431 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRAV9-1-201ENST00000390431 CEP170Q5SW79 1584 aa9.59□□□□□ -0.87
TRAV9-1-201ENST00000390431 POTEEQ6S8J3 1075 aa9.59□□□□□ -0.87
TRAV9-1-201ENST00000390431 PTCD2Q8WV60 388 aaKnown RBP9.59□□□□□ -0.87
TRAV9-1-201ENST00000390431 RYDENQ9NUL5 291 aaKnown RBP9.58□□□□□ -0.88
TRAV9-1-201ENST00000390431 SHROOM2Q13796 1616 aa9.56□□□□□ -0.88
TRAV9-1-201ENST00000390431 PBX2P40425 430 aa9.56□□□□□ -0.88
TRAV9-1-201ENST00000390431 UPF1Q92900 1129 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRAV9-1-201ENST00000390431 KDM4FA0A1W2PPD8 638 aa9.55□□□□□ -0.88
TRAV9-1-201ENST00000390431 GTPBP6O43824 516 aaPredicted RBP9.54□□□□□ -0.88
TRAV9-1-201ENST00000390431 CRISPLD2Q9H0B8 497 aa9.54□□□□□ -0.88
TRAV9-1-201ENST00000390431 ERCC6L2Q5T890 1561 aa9.54□□□□□ -0.88
TRAV9-1-201ENST00000390431 IGF1RP08069 1367 aa9.53□□□□□ -0.88
TRAV9-1-201ENST00000390431 PTGER2P43116 358 aa9.53□□□□□ -0.88
TRAV9-1-201ENST00000390431 KIF27Q86VH2 1401 aa9.53□□□□□ -0.88
TRAV9-1-201ENST00000390431 TBC1D12O60347 775 aa9.52□□□□□ -0.89
TRAV9-1-201ENST00000390431 PPP1R15BQ5SWA1 713 aa9.52□□□□□ -0.89
TRAV9-1-201ENST00000390431 NCKAP5LQ9HCH0 1330 aa9.52□□□□□ -0.89
TRAV9-1-201ENST00000390431 PSDA5PKW4 1024 aaPredicted RBP9.51□□□□□ -0.89
TRAV9-1-201ENST00000390431 ARHGAP33O14559 1287 aa9.5□□□□□ -0.89
TRAV9-1-201ENST00000390431 PSEN2P49810 448 aa9.5□□□□□ -0.89
TRAV9-1-201ENST00000390431 CUL7Q14999 1698 aa9.5□□□□□ -0.89
TRAV9-1-201ENST00000390431 RUSC2Q8N2Y8 1516 aa9.5□□□□□ -0.89
TRAV9-1-201ENST00000390431 PPP4R3BQ5MIZ7 849 aa9.49□□□□□ -0.89
TRAV9-1-201ENST00000390431 OXER1Q8TDS5 423 aa9.49□□□□□ -0.89
TRAV9-1-201ENST00000390431 JPH4Q96JJ6 628 aa9.49□□□□□ -0.89
TRAV9-1-201ENST00000390431 PRG4Q92954 1404 aaPredicted RBP9.48□□□□□ -0.89
TRAV9-1-201ENST00000390431 KIAA0586Q9BVV6 1533 aa9.48□□□□□ -0.89
TRAV9-1-201ENST00000390431 DMRTA1Q5VZB9 504 aa9.48□□□□□ -0.89
TRAV9-1-201ENST00000390431 PDE4AP27815 886 aa9.47□□□□□ -0.89
TRAV9-1-201ENST00000390431 ADGRD1Q6QNK2 874 aa9.47□□□□□ -0.89
TRAV9-1-201ENST00000390431 LARP6Q9BRS8 491 aaKnown RBP9.46□□□□□ -0.9
TRAV9-1-201ENST00000390431 CARMIL1Q5VZK9 1371 aa9.46□□□□□ -0.9
TRAV9-1-201ENST00000390431 KCNK17Q96T54 332 aa9.45□□□□□ -0.9
TRAV9-1-201ENST00000390431 ZNF454Q8N9F8 522 aa9.44□□□□□ -0.9
TRAV9-1-201ENST00000390431 DDX27Q96GQ7 796 aaKnown RBP9.43□□□□□ -0.9
TRAV9-1-201ENST00000390431 CADPS2Q86UW7 1296 aa9.42□□□□□ -0.9
TRAV9-1-201ENST00000390431 TK2O00142 265 aa9.39□□□□□ -0.91
TRAV9-1-201ENST00000390431 EVI5O60447 810 aa9.39□□□□□ -0.91
TRAV9-1-201ENST00000390431 KCNH8Q96L42 1107 aa9.39□□□□□ -0.91
TRAV9-1-201ENST00000390431 MFSD10Q14728 455 aa9.38□□□□□ -0.91
TRAV9-1-201ENST00000390431 RAPGEF2Q9Y4G8 1499 aa9.38□□□□□ -0.91
TRAV9-1-201ENST00000390431 IQGAP2Q13576 1575 aa9.37□□□□□ -0.91
TRAV9-1-201ENST00000390431 MAPKBP1O60336 1514 aa9.37□□□□□ -0.91
TRAV9-1-201ENST00000390431 HRO43593 1189 aa9.37□□□□□ -0.91
TRAV9-1-201ENST00000390431 FOSBP53539 338 aa9.37□□□□□ -0.91
TRAV9-1-201ENST00000390431 ADCY10Q96PN6 1610 aa9.37□□□□□ -0.91
TRAV9-1-201ENST00000390431 MAP3K9P80192 1104 aa9.36□□□□□ -0.91
TRAV9-1-201ENST00000390431 EMILIN3Q9NT22 766 aa9.36□□□□□ -0.91
TRAV9-1-201ENST00000390431 CARMIL2Q6F5E8 1435 aa9.36□□□□□ -0.91
TRAV9-1-201ENST00000390431 TNIKQ9UKE5 1360 aa9.36□□□□□ -0.91
TRAV9-1-201ENST00000390431 ABCC10Q5T3U5 1492 aa9.35□□□□□ -0.91
TRAV9-1-201ENST00000390431 PTPRGP23470 1445 aa9.35□□□□□ -0.91
TRAV9-1-201ENST00000390431 BCL2L12Q9HB09 334 aa9.35□□□□□ -0.91
TRAV9-1-201ENST00000390431 KIF13AQ9H1H9 1805 aa9.35□□□□□ -0.91
TRAV9-1-201ENST00000390431 DISP1Q96F81 1524 aa9.35□□□□□ -0.91
TRAV9-1-201ENST00000390431 UGGT2Q9NYU1 1516 aa9.35□□□□□ -0.91
TRAV9-1-201ENST00000390431 KCTD12Q96CX2 325 aaKnown RBP9.34□□□□□ -0.91
TRAV9-1-201ENST00000390431 STAC3Q96MF2 364 aa9.34□□□□□ -0.91
TRAV9-1-201ENST00000390431 ANO8Q9HCE9 1232 aaPredicted RBP9.33□□□□□ -0.92
TRAV9-1-201ENST00000390431 HCSTQ9UBK5 93 aa9.33□□□□□ -0.92
TRAV9-1-201ENST00000390431 VPS9D1Q9Y2B5 631 aa9.33□□□□□ -0.92
TRAV9-1-201ENST00000390431 UHRF1BP1LA0JNW5 1464 aa9.33□□□□□ -0.92
TRAV9-1-201ENST00000390431 PRXQ9BXM0 1461 aa9.33□□□□□ -0.92
TRAV9-1-201ENST00000390431 PTPREP23469 700 aa9.32□□□□□ -0.92
TRAV9-1-201ENST00000390431 ADAM33Q9BZ11 813 aa9.32□□□□□ -0.92
TRAV9-1-201ENST00000390431 DIP2BQ9P265 1576 aa9.32□□□□□ -0.92
TRAV9-1-201ENST00000390431 ZDHHC16Q969W1 377 aa9.31□□□□□ -0.92
TRAV9-1-201ENST00000390431 ABCC2Q92887 1545 aa9.31□□□□□ -0.92
TRAV9-1-201ENST00000390431 UACAQ9BZF9 1416 aa9.3□□□□□ -0.92
TRAV9-1-201ENST00000390431 FAM69CQ0P6D2 419 aa9.29□□□□□ -0.92
TRAV9-1-201ENST00000390431 BBXQ8WY36 941 aaPredicted RBP9.29□□□□□ -0.92
TRAV9-1-201ENST00000390431 KIAA0556O60303 1618 aa9.29□□□□□ -0.92
TRAV9-1-201ENST00000390431 CTTNBP2Q8WZ74 1663 aa9.29□□□□□ -0.92
TRAV9-1-201ENST00000390431 ZBED2Q9BTP6 218 aa9.28□□□□□ -0.92
TRAV9-1-201ENST00000390431 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
TRAV9-1-201ENST00000390431 KDM5BQ9UGL1 1544 aa9.27□□□□□ -0.93
TRAV9-1-201ENST00000390431 PCDHGA10Q9Y5H3 936 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms