RNA–Protein interactions for RNA: ENST00000389797.7

LRCH1-202, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-202ENST00000389797 TSPY10P0CW01 314 aa20.9■□□□□ 0.94
LRCH1-202ENST00000389797 KIAA1107Q9UPP5 1409 aa20.9■□□□□ 0.94
LRCH1-202ENST00000389797 NUDCQ9Y266 331 aa20.88■□□□□ 0.93
LRCH1-202ENST00000389797 RSPH4AQ5TD94 716 aa20.87■□□□□ 0.93
LRCH1-202ENST00000389797 DHX29Q7Z478 1369 aaKnown RBP20.87■□□□□ 0.93
LRCH1-202ENST00000389797 PLEKHH2Q8IVE3 1493 aa20.86■□□□□ 0.93
LRCH1-202ENST00000389797 POLR3GLQ9BT43 218 aa20.86■□□□□ 0.93
LRCH1-202ENST00000389797 ABCC1P33527 1531 aa20.86■□□□□ 0.93
LRCH1-202ENST00000389797 PLXNC1O60486 1568 aa20.86■□□□□ 0.93
LRCH1-202ENST00000389797 WDR7Q9Y4E6 1490 aa20.85■□□□□ 0.93
LRCH1-202ENST00000389797 USP47Q96K76 1375 aa20.85■□□□□ 0.93
LRCH1-202ENST00000389797 ARID4BQ4LE39 1312 aaPredicted RBP20.84■□□□□ 0.93
LRCH1-202ENST00000389797 CNGB1Q14028 1251 aaPredicted RBP20.84■□□□□ 0.93
LRCH1-202ENST00000389797 OSCARQ8IYS5 282 aa20.84■□□□□ 0.93
LRCH1-202ENST00000389797 ARAP3Q8WWN8 1544 aa20.83■□□□□ 0.93
LRCH1-202ENST00000389797 ZNF326Q5BKZ1 582 aaKnown RBP20.83■□□□□ 0.93
LRCH1-202ENST00000389797 RNF123Q5XPI4 1314 aa20.82■□□□□ 0.92
LRCH1-202ENST00000389797 CCDC136Q96JN2 1154 aa20.82■□□□□ 0.92
LRCH1-202ENST00000389797 NUP155O75694 1391 aa20.82■□□□□ 0.92
LRCH1-202ENST00000389797 NOP58Q9Y2X3 529 aaKnown RBP20.81■□□□□ 0.92
LRCH1-202ENST00000389797 PKD2Q13563 968 aa20.81■□□□□ 0.92
LRCH1-202ENST00000389797 ABCA9Q8IUA7 1624 aa20.81■□□□□ 0.92
LRCH1-202ENST00000389797 UNC13BO14795 1591 aa20.8■□□□□ 0.92
LRCH1-202ENST00000389797 PLEKHG5O94827 1062 aa20.78■□□□□ 0.92
LRCH1-202ENST00000389797 ROCK2O75116 1388 aaKnown RBP20.78■□□□□ 0.92
LRCH1-202ENST00000389797 TRAPPC8Q9Y2L5 1435 aa20.78■□□□□ 0.92
LRCH1-202ENST00000389797 TMC1Q8TDI8 760 aa20.78■□□□□ 0.92
LRCH1-202ENST00000389797 EFCAB2Q5VUJ9 269 aa20.77■□□□□ 0.92
LRCH1-202ENST00000389797 FAM135AQ9P2D6 1515 aa20.77■□□□□ 0.91
LRCH1-202ENST00000389797 BCORL1Q5H9F3 1711 aa20.76■□□□□ 0.91
LRCH1-202ENST00000389797 PNISRQ8TF01 805 aaKnown RBP20.76■□□□□ 0.91
LRCH1-202ENST00000389797 ASXL2Q76L83 1435 aa20.76■□□□□ 0.91
LRCH1-202ENST00000389797 DUOX2Q9NRD8 1548 aa20.73■□□□□ 0.91
LRCH1-202ENST00000389797 ANP32AP39687 249 aaKnown RBP20.73■□□□□ 0.91
LRCH1-202ENST00000389797 KDM5CP41229 1560 aa20.72■□□□□ 0.91
LRCH1-202ENST00000389797 DEKP35659 375 aaKnown RBP20.71■□□□□ 0.91
LRCH1-202ENST00000389797 MAGI2Q86UL8 1455 aa20.71■□□□□ 0.91
LRCH1-202ENST00000389797 IQGAP3Q86VI3 1631 aa20.71■□□□□ 0.91
LRCH1-202ENST00000389797 CARD11Q9BXL7 1154 aa20.7■□□□□ 0.9
LRCH1-202ENST00000389797 ANO8Q9HCE9 1232 aaPredicted RBP20.7■□□□□ 0.9
LRCH1-202ENST00000389797 ZFYVE16Q7Z3T8 1539 aa20.7■□□□□ 0.9
LRCH1-202ENST00000389797 UHRF1BP1Q6BDS2 1440 aa20.69■□□□□ 0.9
LRCH1-202ENST00000389797 ERBINQ96RT1 1412 aa20.69■□□□□ 0.9
LRCH1-202ENST00000389797 FANCAO15360 1455 aa20.69■□□□□ 0.9
LRCH1-202ENST00000389797 PAK3O75914 559 aaPredicted RBP20.68■□□□□ 0.9
LRCH1-202ENST00000389797 RALGAPBQ86X10 1494 aa20.68■□□□□ 0.9
LRCH1-202ENST00000389797 IPO9Q96P70 1041 aaKnown RBP20.67■□□□□ 0.9
LRCH1-202ENST00000389797 SENP3-EIF4A1A0A087X0R7 540 aa20.66■□□□□ 0.9
LRCH1-202ENST00000389797 INO80Q9ULG1 1556 aaPredicted RBP20.66■□□□□ 0.9
LRCH1-202ENST00000389797 KTN1Q86UP2 1357 aaKnown RBP20.66■□□□□ 0.9
LRCH1-202ENST00000389797 BRD4O60885 1362 aaPredicted RBP20.65■□□□□ 0.9
LRCH1-202ENST00000389797 RTEL1-TNFRSF6BF6WH68 1400 aa20.65■□□□□ 0.9
LRCH1-202ENST00000389797 NBR1Q14596 966 aa20.65■□□□□ 0.9
LRCH1-202ENST00000389797 RALBP1Q15311 655 aa20.65■□□□□ 0.9
LRCH1-202ENST00000389797 AFAP1Q8N556 730 aa20.65■□□□□ 0.9
LRCH1-202ENST00000389797 MYBBP1AQ9BQG0 1328 aaKnown RBP20.64■□□□□ 0.89
LRCH1-202ENST00000389797 LRPPRCP42704 1394 aaKnown RBP20.64■□□□□ 0.89
LRCH1-202ENST00000389797 PLA2R1Q13018 1463 aa20.64■□□□□ 0.89
LRCH1-202ENST00000389797 ZBTB47Q9UFB7 747 aaPredicted RBP20.63■□□□□ 0.89
LRCH1-202ENST00000389797 ST20-MTHFSA0A0A6YYL1 179 aa20.62■□□□□ 0.89
LRCH1-202ENST00000389797 ADGRL1O94910 1474 aa20.6■□□□□ 0.89
LRCH1-202ENST00000389797 KDM2AQ9Y2K7 1162 aa20.6■□□□□ 0.89
LRCH1-202ENST00000389797 SPAG9O60271 1321 aaKnown RBP20.6■□□□□ 0.89
LRCH1-202ENST00000389797 ATP7AQ04656 1500 aa20.6■□□□□ 0.89
LRCH1-202ENST00000389797 DEPDC5O75140 1603 aa20.59■□□□□ 0.89
LRCH1-202ENST00000389797 RRP1P56182 461 aaKnown RBP20.58■□□□□ 0.89
LRCH1-202ENST00000389797 SCAPERQ9BY12 1400 aa20.58■□□□□ 0.88
LRCH1-202ENST00000389797 DCAF11Q8TEB1 546 aa20.56■□□□□ 0.88
LRCH1-202ENST00000389797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.56■□□□□ 0.883e-6■□□□□ 10.9
LRCH1-202ENST00000389797 RTL5Q5HYW3 569 aaPredicted RBP20.56■□□□□ 0.88
LRCH1-202ENST00000389797 RCAN3Q9UKA8 241 aa20.55■□□□□ 0.88
LRCH1-202ENST00000389797 ATP10AO60312 1499 aa20.55■□□□□ 0.88
LRCH1-202ENST00000389797 KIDINS220Q9ULH0 1771 aa20.54■□□□□ 0.88
LRCH1-202ENST00000389797 NLRP13Q86W25 1043 aa20.54■□□□□ 0.88
LRCH1-202ENST00000389797 PDE3BQ13370 1112 aa20.53■□□□□ 0.88
LRCH1-202ENST00000389797 TCERG1O14776 1098 aaKnown RBP20.53■□□□□ 0.88
LRCH1-202ENST00000389797 NPM1P06748 294 aaKnown RBP eCLIP20.53■□□□□ 0.88
LRCH1-202ENST00000389797 E9PCH4 1651 aa20.53■□□□□ 0.88
LRCH1-202ENST00000389797 EXOC6Q8TAG9 804 aa20.53■□□□□ 0.88
LRCH1-202ENST00000389797 CCDC144AA2RUR9 1427 aa20.52■□□□□ 0.88
LRCH1-202ENST00000389797 VWDEQ8N2E2 1590 aa20.51■□□□□ 0.87
LRCH1-202ENST00000389797 CD109Q6YHK3 1445 aa20.5■□□□□ 0.87
LRCH1-202ENST00000389797 MROH1Q8NDA8 1641 aa20.5■□□□□ 0.87
LRCH1-202ENST00000389797 EIF2AK4Q9P2K8 1649 aaKnown RBP20.49■□□□□ 0.87
LRCH1-202ENST00000389797 SALL2Q9Y467 1007 aaPredicted RBP20.49■□□□□ 0.87
LRCH1-202ENST00000389797 CFAP74Q9C0B2 1584 aa20.49■□□□□ 0.87
LRCH1-202ENST00000389797 ZNF518AQ6AHZ1 1483 aa20.47■□□□□ 0.87
LRCH1-202ENST00000389797 PARD3Q8TEW0 1356 aa20.47■□□□□ 0.87
LRCH1-202ENST00000389797 UBE2Q2Q8WVN8 375 aa20.47■□□□□ 0.87
LRCH1-202ENST00000389797 A2MP01023 1474 aa20.46■□□□□ 0.87
LRCH1-202ENST00000389797 TET3O43151 1660 aa20.46■□□□□ 0.87
LRCH1-202ENST00000389797 PRDM15P57071 1507 aaPredicted RBP20.45■□□□□ 0.86
LRCH1-202ENST00000389797 TRPM1Q7Z4N2 1603 aa20.45■□□□□ 0.86
LRCH1-202ENST00000389797 RIMBP3CA6NJZ7 1639 aa20.45■□□□□ 0.86
LRCH1-202ENST00000389797 RIMBP3BA6NNM3 1639 aa20.45■□□□□ 0.86
LRCH1-202ENST00000389797 RIMBP3Q9UFD9 1639 aa20.45■□□□□ 0.86
LRCH1-202ENST00000389797 NPM2Q86SE8 214 aaKnown RBP20.45■□□□□ 0.86
LRCH1-202ENST00000389797 MS4A1P11836 297 aa20.45■□□□□ 0.86
LRCH1-202ENST00000389797 POGZQ7Z3K3 1410 aa20.45■□□□□ 0.86
LRCH1-202ENST00000389797 PDE4AP27815 886 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms