RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 PLEKHG5O94827 1062 aa10.78□□□□□ -0.68
PKP4-202ENST00000389759 PHF14O94880 888 aa10.78□□□□□ -0.68
PKP4-202ENST00000389759 UACAQ9BZF9 1416 aa10.78□□□□□ -0.68
PKP4-202ENST00000389759 FAM43AQ8N2R8 423 aa10.78□□□□□ -0.68
PKP4-202ENST00000389759 EIF3AQ14152 1382 aaKnown RBP10.78□□□□□ -0.68
PKP4-202ENST00000389759 TDRD9Q8NDG6 1382 aaKnown RBP10.77□□□□□ -0.68
PKP4-202ENST00000389759 TAOK2Q9UL54 1235 aa10.77□□□□□ -0.69
PKP4-202ENST00000389759 RRP7AQ9Y3A4 280 aaKnown RBP10.77□□□□□ -0.69
PKP4-202ENST00000389759 ZKSCAN2Q63HK3 967 aa10.76□□□□□ -0.69
PKP4-202ENST00000389759 KIF21BO75037 1637 aa10.76□□□□□ -0.69
PKP4-202ENST00000389759 SMARCA2P51531 1590 aa10.76□□□□□ -0.69
PKP4-202ENST00000389759 FRAT2O75474 233 aaPredicted RBP10.76□□□□□ -0.69
PKP4-202ENST00000389759 HDGFL2Q7Z4V5 671 aaPredicted RBP10.76□□□□□ -0.69
PKP4-202ENST00000389759 BACH2Q9BYV9 841 aa10.76□□□□□ -0.69
PKP4-202ENST00000389759 NGEFQ8N5V2 710 aa10.76□□□□□ -0.69
PKP4-202ENST00000389759 HMMRO75330 724 aa10.75□□□□□ -0.69
PKP4-202ENST00000389759 FAM13BQ9NYF5 915 aa10.75□□□□□ -0.69
PKP4-202ENST00000389759 MRE11P49959 708 aa10.75□□□□□ -0.69
PKP4-202ENST00000389759 HTATSF1O43719 755 aaKnown RBP10.75□□□□□ -0.69
PKP4-202ENST00000389759 RTF1Q92541 710 aaKnown RBP10.74□□□□□ -0.69
PKP4-202ENST00000389759 RRBP1Q9P2E9 1410 aaKnown RBP10.74□□□□□ -0.69
PKP4-202ENST00000389759 CSPP1Q1MSJ5 1256 aa10.74□□□□□ -0.69
PKP4-202ENST00000389759 ANKRD45Q5TZF3 282 aa10.74□□□□□ -0.69
PKP4-202ENST00000389759 FOXD4L5Q5VV16 416 aaPredicted RBP10.74□□□□□ -0.69
PKP4-202ENST00000389759 NOL8Q76FK4 1167 aaKnown RBP10.74□□□□□ -0.69
PKP4-202ENST00000389759 FOXD4L4Q8WXT5 416 aaPredicted RBP10.74□□□□□ -0.69
PKP4-202ENST00000389759 TNNT3P45378 269 aaPredicted RBP10.73□□□□□ -0.69
PKP4-202ENST00000389759 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.73□□□□□ -0.69
PKP4-202ENST00000389759 TRIM6-TRIM34B2RNG4 842 aa10.73□□□□□ -0.69
PKP4-202ENST00000389759 STK26Q9P289 416 aa10.73□□□□□ -0.69
PKP4-202ENST00000389759 BRD4O60885 1362 aaPredicted RBP10.73□□□□□ -0.69
PKP4-202ENST00000389759 FGD6Q6ZV73 1430 aa10.73□□□□□ -0.69
PKP4-202ENST00000389759 PRKCSHP14314 528 aaPredicted RBP10.72□□□□□ -0.69
PKP4-202ENST00000389759 CCDC144AA2RUR9 1427 aa10.72□□□□□ -0.69
PKP4-202ENST00000389759 AKNAQ7Z591 1439 aa10.72□□□□□ -0.69
PKP4-202ENST00000389759 HNRNPMP52272 730 aaKnown RBP eCLIP10.72□□□□□ -0.693e-6■■■□□ 19.2
PKP4-202ENST00000389759 RSPH4AQ5TD94 716 aa10.72□□□□□ -0.69
PKP4-202ENST00000389759 DNAJC5BQ9UF47 199 aa10.72□□□□□ -0.69
PKP4-202ENST00000389759 SOX12O15370 315 aa10.72□□□□□ -0.69
PKP4-202ENST00000389759 CDCA7LQ96GN5 454 aa10.72□□□□□ -0.69
PKP4-202ENST00000389759 C22orf23Q9BZE7 217 aa10.72□□□□□ -0.69
PKP4-202ENST00000389759 DDX19BQ9UMR2 479 aa10.71□□□□□ -0.7
PKP4-202ENST00000389759 CARMIL2Q6F5E8 1435 aa10.7□□□□□ -0.7
PKP4-202ENST00000389759 TRAK2O60296 914 aa10.7□□□□□ -0.7
PKP4-202ENST00000389759 DZIP1LQ8IYY4 767 aaKnown RBP10.7□□□□□ -0.7
PKP4-202ENST00000389759 STK31Q9BXU1 1019 aa10.7□□□□□ -0.7
PKP4-202ENST00000389759 AAMPQ13685 434 aa10.69□□□□□ -0.7
PKP4-202ENST00000389759 EFCAB2Q5VUJ9 269 aa10.69□□□□□ -0.7
PKP4-202ENST00000389759 TERF2IPQ9NYB0 399 aa10.69□□□□□ -0.7
PKP4-202ENST00000389759 ERCC6Q03468 1493 aa10.69□□□□□ -0.7
PKP4-202ENST00000389759 LRRC9Q6ZRR7 1453 aa10.69□□□□□ -0.7
PKP4-202ENST00000389759 CCDC184Q52MB2 194 aa10.69□□□□□ -0.7
PKP4-202ENST00000389759 GGT6Q6P531 493 aa10.69□□□□□ -0.7
PKP4-202ENST00000389759 LMOD3Q0VAK6 560 aa10.68□□□□□ -0.7
PKP4-202ENST00000389759 SLC4A10Q6U841 1118 aa10.68□□□□□ -0.7
PKP4-202ENST00000389759 SMG6Q86US8 1419 aaKnown RBP10.68□□□□□ -0.7
PKP4-202ENST00000389759 PNISRQ8TF01 805 aaKnown RBP10.68□□□□□ -0.7
PKP4-202ENST00000389759 NUCB2P80303 420 aa10.68□□□□□ -0.7
PKP4-202ENST00000389759 FOXD4L6Q3SYB3 417 aaPredicted RBP10.68□□□□□ -0.7
PKP4-202ENST00000389759 FOXD4L3Q6VB84 417 aaPredicted RBP10.68□□□□□ -0.7
PKP4-202ENST00000389759 ATP6V1DQ9Y5K8 247 aa10.68□□□□□ -0.7
PKP4-202ENST00000389759 MAP7D2Q96T17 732 aa10.67□□□□□ -0.7
PKP4-202ENST00000389759 NASPP49321 788 aaPredicted RBP10.67□□□□□ -0.7
PKP4-202ENST00000389759 PANK1Q8TE04 598 aa10.67□□□□□ -0.7
PKP4-202ENST00000389759 KIF16BQ96L93 1317 aa10.67□□□□□ -0.7
PKP4-202ENST00000389759 IGF1RP08069 1367 aa10.67□□□□□ -0.7
PKP4-202ENST00000389759 MYOM3Q5VTT5 1437 aa10.67□□□□□ -0.7
PKP4-202ENST00000389759 A0A0G2JS52 829 aa10.67□□□□□ -0.7
PKP4-202ENST00000389759 TPM4P67936 248 aa10.67□□□□□ -0.7
PKP4-202ENST00000389759 ADAMTS8Q9UP79 889 aa10.67□□□□□ -0.7
PKP4-202ENST00000389759 ELL2O00472 640 aaPredicted RBP10.66□□□□□ -0.7
PKP4-202ENST00000389759 REC8O95072 547 aa10.66□□□□□ -0.7
PKP4-202ENST00000389759 PKNOX2Q96KN3 472 aa10.66□□□□□ -0.7
PKP4-202ENST00000389759 GNL2Q13823 731 aaKnown RBP10.66□□□□□ -0.7
PKP4-202ENST00000389759 CADPSQ9ULU8 1353 aa10.66□□□□□ -0.7
PKP4-202ENST00000389759 ATAD2BQ9ULI0 1458 aa10.66□□□□□ -0.7
PKP4-202ENST00000389759 TRAK1Q9UPV9 953 aa10.66□□□□□ -0.7
PKP4-202ENST00000389759 ARAP1Q96P48 1450 aa10.65□□□□□ -0.7
PKP4-202ENST00000389759 SPAG9O60271 1321 aaKnown RBP10.65□□□□□ -0.7
PKP4-202ENST00000389759 KIF3BO15066 747 aa10.65□□□□□ -0.7
PKP4-202ENST00000389759 TPM2P07951 284 aa10.65□□□□□ -0.7
PKP4-202ENST00000389759 MTERF4Q7Z6M4 381 aaKnown RBP10.65□□□□□ -0.7
PKP4-202ENST00000389759 LNPKQ9C0E8 428 aa10.65□□□□□ -0.7
PKP4-202ENST00000389759 R3HCC1Q9Y3T6 440 aaKnown RBP10.65□□□□□ -0.7
PKP4-202ENST00000389759 SMARCA4P51532 1647 aa10.65□□□□□ -0.7
PKP4-202ENST00000389759 CHMP4AQ9BY43 222 aa10.64□□□□□ -0.71
PKP4-202ENST00000389759 LMOD2Q6P5Q4 547 aa10.64□□□□□ -0.71
PKP4-202ENST00000389759 MIA2Q96PC5 1412 aa10.64□□□□□ -0.71
PKP4-202ENST00000389759 MCTP1Q6DN14 999 aa10.64□□□□□ -0.71
PKP4-202ENST00000389759 GPATCH3Q96I76 525 aa10.64□□□□□ -0.71
PKP4-202ENST00000389759 ZNF771Q7L3S4 317 aaPredicted RBP10.63□□□□□ -0.71
PKP4-202ENST00000389759 ISY1Q9ULR0 285 aaKnown RBP10.63□□□□□ -0.71
PKP4-202ENST00000389759 RILPL2Q969X0 211 aa10.63□□□□□ -0.71
PKP4-202ENST00000389759 RUNDC1Q96C34 613 aa10.63□□□□□ -0.71
PKP4-202ENST00000389759 WDR97A6NE52 1622 aa10.63□□□□□ -0.71
PKP4-202ENST00000389759 BICRAQ9NZM4 1560 aa10.62□□□□□ -0.71
PKP4-202ENST00000389759 GOLGA6L19H0YKK7 550 aa10.62□□□□□ -0.71
PKP4-202ENST00000389759 HDAC5Q9UQL6 1122 aa10.62□□□□□ -0.71
PKP4-202ENST00000389759 PDE3AQ14432 1141 aa10.62□□□□□ -0.71
PKP4-202ENST00000389759 NBPF8Q3BBV2 869 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms