RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 ARID3CA6NKF2 412 aa19.56■□□□□ 0.72
CTNS-202ENST00000381870 CENPQQ7L2Z9 268 aaPredicted RBP19.56■□□□□ 0.72
CTNS-202ENST00000381870 CARD11Q9BXL7 1154 aa19.56■□□□□ 0.72
CTNS-202ENST00000381870 PZPP20742 1482 aa19.55■□□□□ 0.72
CTNS-202ENST00000381870 ST20-MTHFSA0A0A6YYL1 179 aa19.54■□□□□ 0.72
CTNS-202ENST00000381870 ABCC5O15440 1437 aa19.53■□□□□ 0.72
CTNS-202ENST00000381870 RGS3P49796 1198 aa19.53■□□□□ 0.72
CTNS-202ENST00000381870 ZNF644Q9H582 1327 aaPredicted RBP19.52■□□□□ 0.72
CTNS-202ENST00000381870 PARD3Q8TEW0 1356 aa19.5■□□□□ 0.71
CTNS-202ENST00000381870 CDK13Q14004 1512 aaKnown RBP19.5■□□□□ 0.71
CTNS-202ENST00000381870 GLIPR1L2Q4G1C9 344 aa19.49■□□□□ 0.71
CTNS-202ENST00000381870 VSIG10Q8N0Z9 540 aa19.49■□□□□ 0.71
CTNS-202ENST00000381870 RALGAPBQ86X10 1494 aa19.49■□□□□ 0.71
CTNS-202ENST00000381870 EPRSP07814 1512 aaKnown RBP19.48■□□□□ 0.71
CTNS-202ENST00000381870 KIAA1107Q9UPP5 1409 aa19.47■□□□□ 0.71
CTNS-202ENST00000381870 ZMYND15Q9H091 742 aa19.47■□□□□ 0.71
CTNS-202ENST00000381870 E9PCH4 1651 aa19.47■□□□□ 0.71
CTNS-202ENST00000381870 PKD2Q13563 968 aa19.46■□□□□ 0.71
CTNS-202ENST00000381870 DNMT1P26358 1616 aaKnown RBP19.45■□□□□ 0.7
CTNS-202ENST00000381870 EIF4G3O43432 1585 aaKnown RBP19.45■□□□□ 0.7
CTNS-202ENST00000381870 ARXQ96QS3 562 aa19.45■□□□□ 0.7
CTNS-202ENST00000381870 KDM2AQ9Y2K7 1162 aa19.45■□□□□ 0.7
CTNS-202ENST00000381870 BLMP54132 1417 aaPredicted RBP19.45■□□□□ 0.7
CTNS-202ENST00000381870 UHRF1BP1Q6BDS2 1440 aa19.45■□□□□ 0.7
CTNS-202ENST00000381870 NAP1L5Q96NT1 182 aaPredicted RBP19.44■□□□□ 0.7
CTNS-202ENST00000381870 L1TD1Q5T7N2 865 aaKnown RBP19.44■□□□□ 0.7
CTNS-202ENST00000381870 CHMP7Q8WUX9 453 aaPredicted RBP19.44■□□□□ 0.7
CTNS-202ENST00000381870 USP19O94966 1318 aa19.43■□□□□ 0.7
CTNS-202ENST00000381870 SLKQ9H2G2 1235 aaPredicted RBP19.43■□□□□ 0.7
CTNS-202ENST00000381870 CC2D1BQ5T0F9 858 aaKnown RBP19.42■□□□□ 0.7
CTNS-202ENST00000381870 PER1O15534 1290 aaPredicted RBP19.41■□□□□ 0.7
CTNS-202ENST00000381870 ZMYM4Q5VZL5 1548 aa19.39■□□□□ 0.7
CTNS-202ENST00000381870 SEC24BO95487 1268 aa19.38■□□□□ 0.69
CTNS-202ENST00000381870 HSP90AA2PQ14568 343 aaPredicted RBP19.38■□□□□ 0.69
CTNS-202ENST00000381870 PNNQ9H307 717 aaKnown RBP19.38■□□□□ 0.69
CTNS-202ENST00000381870 XRCC6P12956 609 aaKnown RBP eCLIP19.37■□□□□ 0.69
CTNS-202ENST00000381870 DUSP27Q5VZP5 1158 aa19.36■□□□□ 0.69
CTNS-202ENST00000381870 PBRM1Q86U86 1689 aa19.35■□□□□ 0.69
CTNS-202ENST00000381870 HSP90AA1P07900 732 aaKnown RBP19.35■□□□□ 0.69
CTNS-202ENST00000381870 PANK2Q9BZ23 570 aa19.35■□□□□ 0.69
CTNS-202ENST00000381870 PLEKHH2Q8IVE3 1493 aa19.35■□□□□ 0.69
CTNS-202ENST00000381870 INSRP06213 1382 aa19.34■□□□□ 0.69
CTNS-202ENST00000381870 CLCN1P35523 988 aa19.34■□□□□ 0.69
CTNS-202ENST00000381870 ADAMTS8Q9UP79 889 aa19.34■□□□□ 0.69
CTNS-202ENST00000381870 PLEKHH1Q9ULM0 1364 aa19.33■□□□□ 0.69
CTNS-202ENST00000381870 BECN1Q14457 450 aa19.33■□□□□ 0.68
CTNS-202ENST00000381870 ANTXR1Q9H6X2 564 aa19.33■□□□□ 0.68
CTNS-202ENST00000381870 KIAA0586Q9BVV6 1533 aa19.33■□□□□ 0.68
CTNS-202ENST00000381870 RRP9O43818 475 aaKnown RBP19.32■□□□□ 0.68
CTNS-202ENST00000381870 GOLGA6L3A6NEY3 463 aa19.31■□□□□ 0.68
CTNS-202ENST00000381870 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.31■□□□□ 0.68
CTNS-202ENST00000381870 IGHDP01880 384 aa19.3■□□□□ 0.68
CTNS-202ENST00000381870 ARHGEF12Q9NZN5 1544 aa19.3■□□□□ 0.68
CTNS-202ENST00000381870 GZF1Q9H116 711 aaPredicted RBP19.3■□□□□ 0.68
CTNS-202ENST00000381870 FSD2A1L4K1 749 aa19.29■□□□□ 0.68
CTNS-202ENST00000381870 VIRMAQ69YN4 1812 aaKnown RBP19.27■□□□□ 0.68
CTNS-202ENST00000381870 PANK3Q9H999 370 aa19.27■□□□□ 0.68
CTNS-202ENST00000381870 GOLGA2Q08379 1002 aa19.26■□□□□ 0.67
CTNS-202ENST00000381870 NLRP1Q9C000 1473 aa19.26■□□□□ 0.67
CTNS-202ENST00000381870 ADAMTS12P58397 1594 aa19.25■□□□□ 0.67
CTNS-202ENST00000381870 ZNF521Q96K83 1311 aa19.25■□□□□ 0.67
CTNS-202ENST00000381870 EIF3AQ14152 1382 aaKnown RBP19.24■□□□□ 0.67
CTNS-202ENST00000381870 CAMSAP2Q08AD1 1489 aa19.24■□□□□ 0.67
CTNS-202ENST00000381870 NUP155O75694 1391 aa19.24■□□□□ 0.67
CTNS-202ENST00000381870 BCAR3O75815 825 aa19.24■□□□□ 0.67
CTNS-202ENST00000381870 MAGI1Q96QZ7 1491 aaPredicted RBP19.23■□□□□ 0.67
CTNS-202ENST00000381870 DISP3Q9P2K9 1392 aa19.23■□□□□ 0.67
CTNS-202ENST00000381870 NBPF1Q3BBV0 1214 aa19.23■□□□□ 0.67
CTNS-202ENST00000381870 SPRYD3Q8NCJ5 442 aa19.23■□□□□ 0.67
CTNS-202ENST00000381870 ZNF777Q9ULD5 760 aaPredicted RBP19.23■□□□□ 0.67
CTNS-202ENST00000381870 TBC1D2Q9BYX2 928 aa19.23■□□□□ 0.67
CTNS-202ENST00000381870 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
CTNS-202ENST00000381870 ADGBQ8N7X0 1667 aa19.22■□□□□ 0.67
CTNS-202ENST00000381870 SLFN5Q08AF3 891 aa19.22■□□□□ 0.67
CTNS-202ENST00000381870 CFDP1Q9UEE9 299 aaPredicted RBP19.22■□□□□ 0.67
CTNS-202ENST00000381870 ANKRD50Q9ULJ7 1429 aa19.21■□□□□ 0.67
CTNS-202ENST00000381870 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
CTNS-202ENST00000381870 MCM4P33991 863 aa19.21■□□□□ 0.67
CTNS-202ENST00000381870 SPINK5Q9NQ38 1064 aaPredicted RBP19.2■□□□□ 0.66
CTNS-202ENST00000381870 WDR43Q15061 677 aaKnown RBP eCLIP19.2■□□□□ 0.66
CTNS-202ENST00000381870 ADGRL2O95490 1459 aa19.19■□□□□ 0.66
CTNS-202ENST00000381870 COL17A1Q9UMD9 1497 aaPredicted RBP19.19■□□□□ 0.66
CTNS-202ENST00000381870 ANKRD30AQ9BXX3 1397 aa19.18■□□□□ 0.66
CTNS-202ENST00000381870 ERBB4Q15303 1308 aa19.18■□□□□ 0.66
CTNS-202ENST00000381870 MAPK8IP3Q9UPT6 1336 aa19.18■□□□□ 0.66
CTNS-202ENST00000381870 TESK2Q96S53 571 aa19.17■□□□□ 0.66
CTNS-202ENST00000381870 IQGAP2Q13576 1575 aa19.17■□□□□ 0.66
CTNS-202ENST00000381870 TBC1D32Q96NH3 1257 aa19.16■□□□□ 0.66
CTNS-202ENST00000381870 TRAK2O60296 914 aa19.16■□□□□ 0.66
CTNS-202ENST00000381870 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
CTNS-202ENST00000381870 PPP2R1AP30153 589 aa19.15■□□□□ 0.66
CTNS-202ENST00000381870 TRMT2AQ8IZ69 625 aaKnown RBP19.15■□□□□ 0.66
CTNS-202ENST00000381870 PRAG1Q86YV5 1406 aa19.15■□□□□ 0.66
CTNS-202ENST00000381870 ESPNB1AK53 854 aa19.15■□□□□ 0.66
CTNS-202ENST00000381870 MRE11P49959 708 aa19.15■□□□□ 0.66
CTNS-202ENST00000381870 CCDC146Q8IYE0 955 aa19.15■□□□□ 0.66
CTNS-202ENST00000381870 TRPM1Q7Z4N2 1603 aa19.14■□□□□ 0.65
CTNS-202ENST00000381870 KDM5DQ9BY66 1539 aa19.14■□□□□ 0.65
CTNS-202ENST00000381870 UPF2Q9HAU5 1272 aaKnown RBP19.13■□□□□ 0.65
CTNS-202ENST00000381870 PRG4Q92954 1404 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms