RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 ARID3AQ99856 593 aa15.77■□□□□ 0.12
SHOX-203ENST00000381578 TROQ12816 1431 aaPredicted RBP15.77■□□□□ 0.12
SHOX-203ENST00000381578 SMG6Q86US8 1419 aaKnown RBP15.77■□□□□ 0.11
SHOX-203ENST00000381578 PNISRQ8TF01 805 aaKnown RBP15.77■□□□□ 0.11
SHOX-203ENST00000381578 RAPGEF6Q8TEU7 1601 aa15.77■□□□□ 0.11
SHOX-203ENST00000381578 ST20-MTHFSA0A0A6YYL1 179 aa15.76■□□□□ 0.11
SHOX-203ENST00000381578 NEUROD2Q15784 382 aa15.75■□□□□ 0.11
SHOX-203ENST00000381578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.11
SHOX-203ENST00000381578 HSP90AA1P07900 732 aaKnown RBP15.75■□□□□ 0.11
SHOX-203ENST00000381578 MAGI3Q5TCQ9 1506 aa15.74■□□□□ 0.11
SHOX-203ENST00000381578 PKD2Q13563 968 aa15.74■□□□□ 0.11
SHOX-203ENST00000381578 TRIM44Q96DX7 344 aaPredicted RBP15.74■□□□□ 0.11
SHOX-203ENST00000381578 MIA2Q96PC5 1412 aa15.74■□□□□ 0.11
SHOX-203ENST00000381578 PTPN23Q9H3S7 1636 aa15.73■□□□□ 0.11
SHOX-203ENST00000381578 HSP90AA2PQ14568 343 aaPredicted RBP15.73■□□□□ 0.11
SHOX-203ENST00000381578 FAM161AQ3B820 660 aa15.73■□□□□ 0.11
SHOX-203ENST00000381578 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
SHOX-203ENST00000381578 POGKQ9P215 609 aa15.72■□□□□ 0.11
SHOX-203ENST00000381578 PTPRKQ15262 1439 aa15.71■□□□□ 0.11
SHOX-203ENST00000381578 NPM1P06748 294 aaKnown RBP eCLIP15.71■□□□□ 0.11
SHOX-203ENST00000381578 USP47Q96K76 1375 aa15.71■□□□□ 0.1
SHOX-203ENST00000381578 HFM1A2PYH4 1435 aa15.7■□□□□ 0.1
SHOX-203ENST00000381578 HNRNPMP52272 730 aaKnown RBP eCLIP15.7■□□□□ 0.1
SHOX-203ENST00000381578 C20orf194Q5TEA3 1177 aa15.7■□□□□ 0.1
SHOX-203ENST00000381578 L1TD1Q5T7N2 865 aaKnown RBP15.7■□□□□ 0.1
SHOX-203ENST00000381578 NLRP13Q86W25 1043 aa15.69■□□□□ 0.1
SHOX-203ENST00000381578 MYBBP1AQ9BQG0 1328 aaKnown RBP15.68■□□□□ 0.1
SHOX-203ENST00000381578 NAIPQ13075 1403 aa15.68■□□□□ 0.1
SHOX-203ENST00000381578 CCDC146Q8IYE0 955 aa15.67■□□□□ 0.1
SHOX-203ENST00000381578 GOLGA6L3A6NEY3 463 aa15.67■□□□□ 0.1
SHOX-203ENST00000381578 RALBP1Q15311 655 aa15.67■□□□□ 0.1
SHOX-203ENST00000381578 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
SHOX-203ENST00000381578 ATP10BO94823 1461 aa15.66■□□□□ 0.1
SHOX-203ENST00000381578 LRRIQ1Q96JM4 1722 aa15.66■□□□□ 0.1
SHOX-203ENST00000381578 FAM43AQ8N2R8 423 aa15.65■□□□□ 0.1
SHOX-203ENST00000381578 KTN1Q86UP2 1357 aaKnown RBP15.65■□□□□ 0.1
SHOX-203ENST00000381578 ZBTB7CA1YPR0 619 aa15.65■□□□□ 0.1
SHOX-203ENST00000381578 ANKRD30AQ9BXX3 1397 aa15.64■□□□□ 0.09
SHOX-203ENST00000381578 WASHC2CQ9Y4E1 1318 aa15.64■□□□□ 0.09
SHOX-203ENST00000381578 CENPQQ7L2Z9 268 aaPredicted RBP15.64■□□□□ 0.09
SHOX-203ENST00000381578 CHD1O14646 1710 aa15.64■□□□□ 0.09
SHOX-203ENST00000381578 ANP32BQ92688 251 aaKnown RBP15.63■□□□□ 0.09
SHOX-203ENST00000381578 DAPK1P53355 1430 aa15.63■□□□□ 0.09
SHOX-203ENST00000381578 PDE3BQ13370 1112 aa15.63■□□□□ 0.09
SHOX-203ENST00000381578 KIF15Q9NS87 1388 aa15.62■□□□□ 0.09
SHOX-203ENST00000381578 KNSTRNQ9Y448 316 aa15.61■□□□□ 0.09
SHOX-203ENST00000381578 ARHGEF11O15085 1522 aa15.61■□□□□ 0.09
SHOX-203ENST00000381578 TNNT2P45379 298 aaPredicted RBP15.61■□□□□ 0.09
SHOX-203ENST00000381578 ABCC5O15440 1437 aa15.6■□□□□ 0.09
SHOX-203ENST00000381578 NCLP19338 710 aaKnown RBP15.6■□□□□ 0.09
SHOX-203ENST00000381578 CLUAP1Q96AJ1 413 aa15.6■□□□□ 0.09
SHOX-203ENST00000381578 GPATCH8Q9UKJ3 1502 aaKnown RBP15.6■□□□□ 0.09
SHOX-203ENST00000381578 NCOA1Q15788 1441 aa15.59■□□□□ 0.09
SHOX-203ENST00000381578 TCOF1Q13428 1488 aaKnown RBP15.59■□□□□ 0.09
SHOX-203ENST00000381578 EFCAB2Q5VUJ9 269 aa15.59■□□□□ 0.09
SHOX-203ENST00000381578 FOXD4L1Q9NU39 408 aa15.58■□□□□ 0.09
SHOX-203ENST00000381578 CAMSAP2Q08AD1 1489 aa15.58■□□□□ 0.08
SHOX-203ENST00000381578 CHGAP10645 457 aaKnown RBP15.58■□□□□ 0.08
SHOX-203ENST00000381578 MYH16Q9H6N6 1097 aa15.57■□□□□ 0.08
SHOX-203ENST00000381578 COG6Q9Y2V7 657 aa15.57■□□□□ 0.08
SHOX-203ENST00000381578 MFAP1P55081 439 aaKnown RBP15.57■□□□□ 0.08
SHOX-203ENST00000381578 GOLGA2Q08379 1002 aa15.57■□□□□ 0.08
SHOX-203ENST00000381578 PANK3Q9H999 370 aa15.57■□□□□ 0.08
SHOX-203ENST00000381578 KIF14Q15058 1648 aa15.56■□□□□ 0.08
SHOX-203ENST00000381578 BCL2L13Q9BXK5 485 aa15.56■□□□□ 0.08
SHOX-203ENST00000381578 ZMYND15Q9H091 742 aa15.56■□□□□ 0.08
SHOX-203ENST00000381578 ROCK2O75116 1388 aaKnown RBP15.55■□□□□ 0.08
SHOX-203ENST00000381578 ABCA8O94911 1581 aa15.55■□□□□ 0.08
SHOX-203ENST00000381578 RSPH4AQ5TD94 716 aa15.55■□□□□ 0.08
SHOX-203ENST00000381578 ADAMTS8Q9UP79 889 aa15.55■□□□□ 0.08
SHOX-203ENST00000381578 NUP155O75694 1391 aa15.55■□□□□ 0.08
SHOX-203ENST00000381578 ROCK1Q13464 1354 aa15.53■□□□□ 0.08
SHOX-203ENST00000381578 RRAGDQ9NQL2 400 aaPredicted RBP15.53■□□□□ 0.08
SHOX-203ENST00000381578 TPRNQ4KMQ1 711 aa15.52■□□□□ 0.08
SHOX-203ENST00000381578 ARHGAP5Q13017 1502 aa15.51■□□□□ 0.07
SHOX-203ENST00000381578 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
SHOX-203ENST00000381578 BCAR3O75815 825 aa15.51■□□□□ 0.07
SHOX-203ENST00000381578 PANK2Q9BZ23 570 aa15.51■□□□□ 0.07
SHOX-203ENST00000381578 ANKRD50Q9ULJ7 1429 aa15.51■□□□□ 0.07
SHOX-203ENST00000381578 C9orf84Q5VXU9 1444 aa15.5■□□□□ 0.07
SHOX-203ENST00000381578 PANK1Q8TE04 598 aa15.5■□□□□ 0.07
SHOX-203ENST00000381578 APAF1O14727 1248 aa15.5■□□□□ 0.07
SHOX-203ENST00000381578 BRD4O60885 1362 aaPredicted RBP15.49■□□□□ 0.07
SHOX-203ENST00000381578 RNF123Q5XPI4 1314 aa15.49■□□□□ 0.07
SHOX-203ENST00000381578 HSP90AB1P08238 724 aaKnown RBP15.49■□□□□ 0.07
SHOX-203ENST00000381578 ITSN2Q9NZM3 1697 aa15.49■□□□□ 0.07
SHOX-203ENST00000381578 RRP7AQ9Y3A4 280 aaKnown RBP15.49■□□□□ 0.07
SHOX-203ENST00000381578 HSCBQ8IWL3 235 aa15.48■□□□□ 0.07
SHOX-203ENST00000381578 TMF1P82094 1093 aa15.47■□□□□ 0.07
SHOX-203ENST00000381578 FTSJ3Q8IY81 847 aaKnown RBP15.47■□□□□ 0.07
SHOX-203ENST00000381578 ABCC2Q92887 1545 aa15.46■□□□□ 0.07
SHOX-203ENST00000381578 C8orf34Q49A92 452 aa15.46■□□□□ 0.06
SHOX-203ENST00000381578 A0A0U1RQG5 324 aaPredicted RBP15.45■□□□□ 0.06
SHOX-203ENST00000381578 RBM10P98175 930 aaKnown RBP15.45■□□□□ 0.06
SHOX-203ENST00000381578 NBPF1Q3BBV0 1214 aa15.45■□□□□ 0.06
SHOX-203ENST00000381578 PHF23Q9BUL5 403 aaPredicted RBP15.45■□□□□ 0.06
SHOX-203ENST00000381578 DNMT1P26358 1616 aaKnown RBP15.44■□□□□ 0.06
SHOX-203ENST00000381578 SPAG9O60271 1321 aaKnown RBP15.44■□□□□ 0.06
SHOX-203ENST00000381578 MSNP26038 577 aaKnown RBP15.44■□□□□ 0.06
SHOX-203ENST00000381578 FAM13BQ9NYF5 915 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms