RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
SGCB-201ENST00000381431 ELL2O00472 640 aaPredicted RBP21.68■■□□□ 1.06
SGCB-201ENST00000381431 PTPRGP23470 1445 aa21.68■■□□□ 1.06
SGCB-201ENST00000381431 NAP1L2Q9ULW6 460 aaPredicted RBP21.68■■□□□ 1.06
SGCB-201ENST00000381431 PAK3O75914 559 aaPredicted RBP21.67■■□□□ 1.06
SGCB-201ENST00000381431 COG6Q9Y2V7 657 aa21.66■■□□□ 1.06
SGCB-201ENST00000381431 L1TD1Q5T7N2 865 aaKnown RBP21.65■■□□□ 1.06
SGCB-201ENST00000381431 CALD1Q05682 793 aaKnown RBP21.64■■□□□ 1.05
SGCB-201ENST00000381431 SYNJ1O43426 1573 aa21.62■■□□□ 1.05
SGCB-201ENST00000381431 FOXD4L1Q9NU39 408 aa21.62■■□□□ 1.05
SGCB-201ENST00000381431 SLC4A10Q6U841 1118 aa21.6■■□□□ 1.05
SGCB-201ENST00000381431 CENPQQ7L2Z9 268 aaPredicted RBP21.6■■□□□ 1.05
SGCB-201ENST00000381431 RRBP1Q9P2E9 1410 aaKnown RBP21.6■■□□□ 1.05
SGCB-201ENST00000381431 TRHP20396 242 aaPredicted RBP21.6■■□□□ 1.05
SGCB-201ENST00000381431 MCCP23508 829 aa21.6■■□□□ 1.05
SGCB-201ENST00000381431 NCAPD3P42695 1498 aa21.59■■□□□ 1.05
SGCB-201ENST00000381431 GOLGA6L4A6NEF3 574 aa21.59■■□□□ 1.05
SGCB-201ENST00000381431 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.05
SGCB-201ENST00000381431 NCOA2Q15596 1464 aa21.58■■□□□ 1.05
SGCB-201ENST00000381431 FAM161AQ3B820 660 aa21.57■■□□□ 1.04
SGCB-201ENST00000381431 E9PSI1 815 aa21.57■■□□□ 1.04
SGCB-201ENST00000381431 GBP4Q96PP9 640 aa21.57■■□□□ 1.04
SGCB-201ENST00000381431 FANCIQ9NVI1 1328 aa21.56■■□□□ 1.04
SGCB-201ENST00000381431 NBPF8Q3BBV2 869 aa21.56■■□□□ 1.04
SGCB-201ENST00000381431 CASKIN1Q8WXD9 1431 aa21.55■■□□□ 1.04
SGCB-201ENST00000381431 CNTLNQ9NXG0 1405 aa21.55■■□□□ 1.04
SGCB-201ENST00000381431 STK31Q9BXU1 1019 aa21.54■■□□□ 1.04
SGCB-201ENST00000381431 CDCA7LQ96GN5 454 aa21.54■■□□□ 1.04
SGCB-201ENST00000381431 MINK1Q8N4C8 1332 aaPredicted RBP21.54■■□□□ 1.04
SGCB-201ENST00000381431 PRXQ9BXM0 1461 aa21.53■■□□□ 1.04
SGCB-201ENST00000381431 CCDC184Q52MB2 194 aa21.53■■□□□ 1.04
SGCB-201ENST00000381431 KIAA1211Q6ZU35 1233 aa21.53■■□□□ 1.04
SGCB-201ENST00000381431 ANKRD50Q9ULJ7 1429 aa21.53■■□□□ 1.04
SGCB-201ENST00000381431 LTV1Q96GA3 475 aaPredicted RBP21.53■■□□□ 1.04
SGCB-201ENST00000381431 MSNP26038 577 aaKnown RBP21.52■■□□□ 1.03
SGCB-201ENST00000381431 CFTRP13569 1480 aa21.51■■□□□ 1.03
SGCB-201ENST00000381431 CGNL1Q0VF96 1302 aa21.51■■□□□ 1.03
SGCB-201ENST00000381431 CFAP44Q96MT7 982 aa21.51■■□□□ 1.03
SGCB-201ENST00000381431 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.51■■□□□ 1.03
SGCB-201ENST00000381431 NOL8Q76FK4 1167 aaKnown RBP21.5■■□□□ 1.03
SGCB-201ENST00000381431 NGDNQ8NEJ9 315 aaKnown RBP21.5■■□□□ 1.03
SGCB-201ENST00000381431 TRIM6-TRIM34B2RNG4 842 aa21.5■■□□□ 1.03
SGCB-201ENST00000381431 ZKSCAN2Q63HK3 967 aa21.5■■□□□ 1.03
SGCB-201ENST00000381431 VGFO15240 615 aaPredicted RBP21.49■■□□□ 1.03
SGCB-201ENST00000381431 NBPF1Q3BBV0 1214 aa21.49■■□□□ 1.03
SGCB-201ENST00000381431 ADAMTS8Q9UP79 889 aa21.49■■□□□ 1.03
SGCB-201ENST00000381431 ANKRD45Q5TZF3 282 aa21.47■■□□□ 1.03
SGCB-201ENST00000381431 EVC2Q86UK5 1308 aa21.47■■□□□ 1.03
SGCB-201ENST00000381431 AMPHP49418 695 aa21.46■■□□□ 1.03
SGCB-201ENST00000381431 ZNF330Q9Y3S2 320 aaPredicted RBP21.46■■□□□ 1.03
SGCB-201ENST00000381431 GOLGA6L3A6NEY3 463 aa21.46■■□□□ 1.03
SGCB-201ENST00000381431 ERICH3Q5RHP9 1530 aa21.46■■□□□ 1.03
SGCB-201ENST00000381431 HMMRO75330 724 aa21.45■■□□□ 1.02
SGCB-201ENST00000381431 AFAP1Q8N556 730 aa21.45■■□□□ 1.02
SGCB-201ENST00000381431 CUX1P39880 1505 aa21.43■■□□□ 1.02
SGCB-201ENST00000381431 LMOD3Q0VAK6 560 aa21.43■■□□□ 1.02
SGCB-201ENST00000381431 TMEM132EQ6IEE7 984 aa21.43■■□□□ 1.02
SGCB-201ENST00000381431 FYCO1Q9BQS8 1478 aa21.42■■□□□ 1.02
SGCB-201ENST00000381431 CSB-PGBD3P0DP91 1061 aa21.42■■□□□ 1.02
SGCB-201ENST00000381431 FOXD4L5Q5VV16 416 aaPredicted RBP21.42■■□□□ 1.02
SGCB-201ENST00000381431 FOXD4L4Q8WXT5 416 aaPredicted RBP21.42■■□□□ 1.02
SGCB-201ENST00000381431 USP35Q9P2H5 1018 aa21.42■■□□□ 1.02
SGCB-201ENST00000381431 PANK1Q8TE04 598 aa21.4■■□□□ 1.02
SGCB-201ENST00000381431 NPHP1O15259 732 aa21.4■■□□□ 1.02
SGCB-201ENST00000381431 CFAP70Q5T0N1 1121 aa21.4■■□□□ 1.02
SGCB-201ENST00000381431 CDK11BP21127 795 aaKnown RBP21.39■■□□□ 1.02
SGCB-201ENST00000381431 RIPK4P57078 832 aa21.39■■□□□ 1.01
SGCB-201ENST00000381431 GGNBP2Q9H3C7 697 aa21.38■■□□□ 1.01
SGCB-201ENST00000381431 GSE1Q14687 1217 aa21.38■■□□□ 1.01
SGCB-201ENST00000381431 DRC7Q8IY82 874 aa21.38■■□□□ 1.01
SGCB-201ENST00000381431 DZIP1LQ8IYY4 767 aaKnown RBP21.37■■□□□ 1.01
SGCB-201ENST00000381431 NESP48681 1621 aa21.37■■□□□ 1.01
SGCB-201ENST00000381431 COG3Q96JB2 828 aa21.37■■□□□ 1.01
SGCB-201ENST00000381431 DIAPH1O60610 1272 aaKnown RBP21.36■■□□□ 1.01
SGCB-201ENST00000381431 CYB5RLQ6IPT4 315 aa21.36■■□□□ 1.01
SGCB-201ENST00000381431 EID1Q9Y6B2 187 aa21.36■■□□□ 1.01
SGCB-201ENST00000381431 BRD4O60885 1362 aaPredicted RBP21.36■■□□□ 1.01
SGCB-201ENST00000381431 PNISRQ8TF01 805 aaKnown RBP21.35■■□□□ 1.01
SGCB-201ENST00000381431 TULP1O00294 542 aaPredicted RBP21.35■■□□□ 1.01
SGCB-201ENST00000381431 RUNDC1Q96C34 613 aa21.35■■□□□ 1.01
SGCB-201ENST00000381431 ARID3AQ99856 593 aa21.34■■□□□ 1.01
SGCB-201ENST00000381431 AKNAQ7Z591 1439 aa21.34■■□□□ 1.01
SGCB-201ENST00000381431 WDR97A6NE52 1622 aa21.34■■□□□ 1.01
SGCB-201ENST00000381431 HFM1A2PYH4 1435 aa21.34■■□□□ 1.01
SGCB-201ENST00000381431 CHMP3Q9Y3E7 222 aa21.33■■□□□ 1.01
SGCB-201ENST00000381431 MTHFSP49914 203 aa21.33■■□□□ 1.01
SGCB-201ENST00000381431 FOXD4L6Q3SYB3 417 aaPredicted RBP21.33■■□□□ 1.01
SGCB-201ENST00000381431 FOXD4L3Q6VB84 417 aaPredicted RBP21.33■■□□□ 1.01
SGCB-201ENST00000381431 DDX19BQ9UMR2 479 aa21.32■■□□□ 1
SGCB-201ENST00000381431 RILPL2Q969X0 211 aa21.32■■□□□ 1
SGCB-201ENST00000381431 MIA2Q96PC5 1412 aa21.32■■□□□ 1
SGCB-201ENST00000381431 LNPKQ9C0E8 428 aa21.32■■□□□ 1
SGCB-201ENST00000381431 CABP2Q9NPB3 220 aa21.32■■□□□ 1
SGCB-201ENST00000381431 HMOX1P09601 288 aa21.31■■□□□ 1
SGCB-201ENST00000381431 NRDCO43847 1150 aa21.31■■□□□ 1
SGCB-201ENST00000381431 CHAF1AQ13111 956 aaPredicted RBP21.31■■□□□ 1
SGCB-201ENST00000381431 ST18O60284 1047 aa21.3■■□□□ 1
SGCB-201ENST00000381431 PPP2R1AP30153 589 aa21.3■■□□□ 1
SGCB-201ENST00000381431 TCP11L2Q8N4U5 519 aa21.3■■□□□ 1
SGCB-201ENST00000381431 NGEFQ8N5V2 710 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms