RNA–Protein interactions for RNA: ENST00000380876.4

EIF3CL-201, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3CL, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-201ENST00000380876 PDE3BQ13370 1112 aa17.63■□□□□ 0.41
EIF3CL-201ENST00000380876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.41
EIF3CL-201ENST00000380876 C8orf34Q49A92 452 aa17.63■□□□□ 0.41
EIF3CL-201ENST00000380876 SLKQ9H2G2 1235 aaPredicted RBP17.63■□□□□ 0.41
EIF3CL-201ENST00000380876 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
EIF3CL-201ENST00000380876 CCDC146Q8IYE0 955 aa17.62■□□□□ 0.41
EIF3CL-201ENST00000380876 ARID4BQ4LE39 1312 aaPredicted RBP17.62■□□□□ 0.41
EIF3CL-201ENST00000380876 MBD5Q9P267 1494 aa17.62■□□□□ 0.41
EIF3CL-201ENST00000380876 FAM161AQ3B820 660 aa17.61■□□□□ 0.41
EIF3CL-201ENST00000380876 PER1O15534 1290 aaPredicted RBP17.6■□□□□ 0.41
EIF3CL-201ENST00000380876 POGKQ9P215 609 aa17.6■□□□□ 0.41
EIF3CL-201ENST00000380876 SPRYD3Q8NCJ5 442 aa17.58■□□□□ 0.41
EIF3CL-201ENST00000380876 HNRNPMP52272 730 aaKnown RBP eCLIP17.58■□□□□ 0.4
EIF3CL-201ENST00000380876 ANKRD50Q9ULJ7 1429 aa17.57■□□□□ 0.4
EIF3CL-201ENST00000380876 FBLN2P98095 1184 aa17.57■□□□□ 0.4
EIF3CL-201ENST00000380876 DNMT1P26358 1616 aaKnown RBP17.57■□□□□ 0.4
EIF3CL-201ENST00000380876 KDM2BQ8NHM5 1336 aa17.57■□□□□ 0.4
EIF3CL-201ENST00000380876 PARD3Q8TEW0 1356 aa17.56■□□□□ 0.4
EIF3CL-201ENST00000380876 BCAR3O75815 825 aa17.56■□□□□ 0.4
EIF3CL-201ENST00000380876 SEC24BO95487 1268 aa17.56■□□□□ 0.4
EIF3CL-201ENST00000380876 CENPQQ7L2Z9 268 aaPredicted RBP17.56■□□□□ 0.4
EIF3CL-201ENST00000380876 WDR62O43379 1518 aa17.55■□□□□ 0.4
EIF3CL-201ENST00000380876 CAMSAP2Q08AD1 1489 aa17.55■□□□□ 0.4
EIF3CL-201ENST00000380876 KIF14Q15058 1648 aa17.55■□□□□ 0.4
EIF3CL-201ENST00000380876 DISP3Q9P2K9 1392 aa17.54■□□□□ 0.4
EIF3CL-201ENST00000380876 WDR43Q15061 677 aaKnown RBP eCLIP17.54■□□□□ 0.4
EIF3CL-201ENST00000380876 RALGAPBQ86X10 1494 aa17.54■□□□□ 0.4
EIF3CL-201ENST00000380876 ANKRD30AQ9BXX3 1397 aa17.54■□□□□ 0.4
EIF3CL-201ENST00000380876 KIAA0586Q9BVV6 1533 aa17.53■□□□□ 0.4
EIF3CL-201ENST00000380876 SPINK5Q9NQ38 1064 aaPredicted RBP17.53■□□□□ 0.4
EIF3CL-201ENST00000380876 PLEKHH1Q9ULM0 1364 aa17.53■□□□□ 0.4
EIF3CL-201ENST00000380876 DUSP27Q5VZP5 1158 aa17.53■□□□□ 0.4
EIF3CL-201ENST00000380876 TSPY4P0CV99 314 aa17.52■□□□□ 0.4
EIF3CL-201ENST00000380876 TSPY10P0CW01 314 aa17.52■□□□□ 0.4
EIF3CL-201ENST00000380876 IQGAP2Q13576 1575 aa17.52■□□□□ 0.4
EIF3CL-201ENST00000380876 UBE2Q2Q8WVN8 375 aa17.51■□□□□ 0.39
EIF3CL-201ENST00000380876 IGHDP01880 384 aa17.51■□□□□ 0.39
EIF3CL-201ENST00000380876 GZF1Q9H116 711 aaPredicted RBP17.51■□□□□ 0.39
EIF3CL-201ENST00000380876 NUP153P49790 1475 aaKnown RBP17.5■□□□□ 0.39
EIF3CL-201ENST00000380876 GOLGA2Q08379 1002 aa17.49■□□□□ 0.39
EIF3CL-201ENST00000380876 UHRF1BP1Q6BDS2 1440 aa17.47■□□□□ 0.39
EIF3CL-201ENST00000380876 NEUROD2Q15784 382 aa17.47■□□□□ 0.39
EIF3CL-201ENST00000380876 APAF1O14727 1248 aa17.46■□□□□ 0.39
EIF3CL-201ENST00000380876 RRAGDQ9NQL2 400 aaPredicted RBP17.46■□□□□ 0.39
EIF3CL-201ENST00000380876 TESK2Q96S53 571 aa17.46■□□□□ 0.39
EIF3CL-201ENST00000380876 PANK1Q8TE04 598 aa17.46■□□□□ 0.38
EIF3CL-201ENST00000380876 DMRT2Q9Y5R5 561 aa17.46■□□□□ 0.38
EIF3CL-201ENST00000380876 GPATCH8Q9UKJ3 1502 aaKnown RBP17.45■□□□□ 0.38
EIF3CL-201ENST00000380876 COG6Q9Y2V7 657 aa17.45■□□□□ 0.38
EIF3CL-201ENST00000380876 KNSTRNQ9Y448 316 aa17.45■□□□□ 0.38
EIF3CL-201ENST00000380876 CANXP27824 592 aaKnown RBP17.45■□□□□ 0.38
EIF3CL-201ENST00000380876 PPP2R1AP30153 589 aa17.45■□□□□ 0.38
EIF3CL-201ENST00000380876 PLB1Q6P1J6 1458 aa17.45■□□□□ 0.38
EIF3CL-201ENST00000380876 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.44■□□□□ 0.38
EIF3CL-201ENST00000380876 TMF1P82094 1093 aa17.43■□□□□ 0.38
EIF3CL-201ENST00000380876 FAM43AQ8N2R8 423 aa17.41■□□□□ 0.38
EIF3CL-201ENST00000380876 USP19O94966 1318 aa17.41■□□□□ 0.38
EIF3CL-201ENST00000380876 BLMP54132 1417 aaPredicted RBP17.41■□□□□ 0.38
EIF3CL-201ENST00000380876 TROQ12816 1431 aaPredicted RBP17.41■□□□□ 0.38
EIF3CL-201ENST00000380876 BCL2L13Q9BXK5 485 aa17.41■□□□□ 0.38
EIF3CL-201ENST00000380876 PLEKHD1A6NEE1 506 aa17.4■□□□□ 0.38
EIF3CL-201ENST00000380876 TNNQ9UQP3 1299 aa17.4■□□□□ 0.38
EIF3CL-201ENST00000380876 C9orf84Q5VXU9 1444 aa17.4■□□□□ 0.38
EIF3CL-201ENST00000380876 SLFN5Q08AF3 891 aa17.39■□□□□ 0.37
EIF3CL-201ENST00000380876 TNNT2P45379 298 aaPredicted RBP17.38■□□□□ 0.37
EIF3CL-201ENST00000380876 PANK2Q9BZ23 570 aa17.38■□□□□ 0.37
EIF3CL-201ENST00000380876 RRP7AQ9Y3A4 280 aaKnown RBP17.38■□□□□ 0.37
EIF3CL-201ENST00000380876 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
EIF3CL-201ENST00000380876 KIF21AQ7Z4S6 1674 aa17.38■□□□□ 0.37
EIF3CL-201ENST00000380876 CLUAP1Q96AJ1 413 aa17.38■□□□□ 0.37
EIF3CL-201ENST00000380876 RSPH6AQ9H0K4 717 aa17.38■□□□□ 0.37
EIF3CL-201ENST00000380876 DISP1Q96F81 1524 aa17.37■□□□□ 0.37
EIF3CL-201ENST00000380876 NAP1L5Q96NT1 182 aaPredicted RBP17.37■□□□□ 0.37
EIF3CL-201ENST00000380876 PRAG1Q86YV5 1406 aa17.37■□□□□ 0.37
EIF3CL-201ENST00000380876 ERBINQ96RT1 1412 aa17.36■□□□□ 0.37
EIF3CL-201ENST00000380876 ZMYM4Q5VZL5 1548 aa17.36■□□□□ 0.37
EIF3CL-201ENST00000380876 ZNF608Q9ULD9 1512 aaPredicted RBP17.35■□□□□ 0.37
EIF3CL-201ENST00000380876 BECN1Q14457 450 aa17.33■□□□□ 0.37
EIF3CL-201ENST00000380876 E9PCH4 1651 aa17.33■□□□□ 0.36
EIF3CL-201ENST00000380876 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.36
EIF3CL-201ENST00000380876 RAPGEF6Q8TEU7 1601 aa17.32■□□□□ 0.36
EIF3CL-201ENST00000380876 ZNF521Q96K83 1311 aa17.31■□□□□ 0.36
EIF3CL-201ENST00000380876 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
EIF3CL-201ENST00000380876 AMER1Q5JTC6 1135 aaPredicted RBP17.31■□□□□ 0.36
EIF3CL-201ENST00000380876 ARHGEF12Q9NZN5 1544 aa17.31■□□□□ 0.36
EIF3CL-201ENST00000380876 XRCC6P12956 609 aaKnown RBP eCLIP17.3■□□□□ 0.36
EIF3CL-201ENST00000380876 ADGRL2O95490 1459 aa17.3■□□□□ 0.36
EIF3CL-201ENST00000380876 COL17A1Q9UMD9 1497 aaPredicted RBP17.3■□□□□ 0.36
EIF3CL-201ENST00000380876 TBC1D2Q9BYX2 928 aa17.3■□□□□ 0.36
EIF3CL-201ENST00000380876 MAGI2Q86UL8 1455 aa17.3■□□□□ 0.36
EIF3CL-201ENST00000380876 KIAA0556O60303 1618 aa17.29■□□□□ 0.36
EIF3CL-201ENST00000380876 ADGBQ8N7X0 1667 aa17.28■□□□□ 0.36
EIF3CL-201ENST00000380876 PBRM1Q86U86 1689 aa17.28■□□□□ 0.36
EIF3CL-201ENST00000380876 ADAMTS12P58397 1594 aa17.28■□□□□ 0.36
EIF3CL-201ENST00000380876 A2MP01023 1474 aa17.28■□□□□ 0.36
EIF3CL-201ENST00000380876 PCDHB15Q9Y5E8 787 aa17.27■□□□□ 0.36
EIF3CL-201ENST00000380876 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.36
EIF3CL-201ENST00000380876 RLBP1P12271 317 aa17.27■□□□□ 0.35
EIF3CL-201ENST00000380876 CENPJQ9HC77 1338 aaPredicted RBP17.26■□□□□ 0.35
EIF3CL-201ENST00000380876 GOLGA6L3A6NEY3 463 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms