RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 ARID4BQ4LE39 1312 aaPredicted RBP27.47■■□□□ 1.99
EBF1-202ENST00000380654 UNC13BO14795 1591 aa27.45■■□□□ 1.99
EBF1-202ENST00000380654 CCDC144AA2RUR9 1427 aa27.44■■□□□ 1.98
EBF1-202ENST00000380654 PLEKHH2Q8IVE3 1493 aa27.44■■□□□ 1.98
EBF1-202ENST00000380654 PLA2R1Q13018 1463 aa27.43■■□□□ 1.98
EBF1-202ENST00000380654 RGL3Q3MIN7 710 aa27.42■■□□□ 1.98
EBF1-202ENST00000380654 ROCK2O75116 1388 aaKnown RBP27.42■■□□□ 1.98
EBF1-202ENST00000380654 PLXNC1O60486 1568 aa27.4■■□□□ 1.98
EBF1-202ENST00000380654 ZCCHC11Q5TAX3 1644 aaKnown RBP27.4■■□□□ 1.98
EBF1-202ENST00000380654 PRAG1Q86YV5 1406 aa27.37■■□□□ 1.97
EBF1-202ENST00000380654 TRPM1Q7Z4N2 1603 aa27.37■■□□□ 1.97
EBF1-202ENST00000380654 IQGAP3Q86VI3 1631 aa27.36■■□□□ 1.97
EBF1-202ENST00000380654 PLCH2O75038 1416 aa27.34■■□□□ 1.97
EBF1-202ENST00000380654 NBPF1Q3BBV0 1214 aa27.34■■□□□ 1.97
EBF1-202ENST00000380654 CLASP1Q7Z460 1538 aa27.34■■□□□ 1.97
EBF1-202ENST00000380654 A2MP01023 1474 aa27.33■■□□□ 1.97
EBF1-202ENST00000380654 SENP3-EIF4A1A0A087X0R7 540 aa27.33■■□□□ 1.97
EBF1-202ENST00000380654 DUOX2Q9NRD8 1548 aa27.33■■□□□ 1.96
EBF1-202ENST00000380654 RBM19Q9Y4C8 960 aaKnown RBP27.3■■□□□ 1.96
EBF1-202ENST00000380654 E9PCH4 1651 aa27.29■■□□□ 1.96
EBF1-202ENST00000380654 EFCAB2Q5VUJ9 269 aa27.29■■□□□ 1.96
EBF1-202ENST00000380654 TRAPPC8Q9Y2L5 1435 aa27.29■■□□□ 1.96
EBF1-202ENST00000380654 ABCC1P33527 1531 aa27.28■■□□□ 1.96
EBF1-202ENST00000380654 PNISRQ8TF01 805 aaKnown RBP27.27■■□□□ 1.96
EBF1-202ENST00000380654 MAGI2Q86UL8 1455 aa27.27■■□□□ 1.96
EBF1-202ENST00000380654 TMC1Q8TDI8 760 aa27.27■■□□□ 1.96
EBF1-202ENST00000380654 UHRF1BP1LA0JNW5 1464 aa27.26■■□□□ 1.95
EBF1-202ENST00000380654 ERBINQ96RT1 1412 aa27.26■■□□□ 1.95
EBF1-202ENST00000380654 ERICH6BQ5W0A0 696 aa27.22■■□□□ 1.95
EBF1-202ENST00000380654 PPP4R2Q9NY27 417 aa27.22■■□□□ 1.95
EBF1-202ENST00000380654 GPRASP1Q5JY77 1395 aa27.21■■□□□ 1.95
EBF1-202ENST00000380654 AFAP1Q8N556 730 aa27.19■■□□□ 1.94
EBF1-202ENST00000380654 SMG6Q86US8 1419 aaKnown RBP27.19■■□□□ 1.94
EBF1-202ENST00000380654 ATP10AO60312 1499 aa27.19■■□□□ 1.94
EBF1-202ENST00000380654 MYBBP1AQ9BQG0 1328 aaKnown RBP27.18■■□□□ 1.94
EBF1-202ENST00000380654 PRDM15P57071 1507 aaPredicted RBP27.18■■□□□ 1.94
EBF1-202ENST00000380654 MYT1Q01538 1121 aa27.16■■□□□ 1.94
EBF1-202ENST00000380654 RALBP1Q15311 655 aa27.16■■□□□ 1.94
EBF1-202ENST00000380654 DISP3Q9P2K9 1392 aa27.15■■□□□ 1.94
EBF1-202ENST00000380654 B4GALNT3Q6L9W6 998 aa27.15■■□□□ 1.94
EBF1-202ENST00000380654 TESK2Q96S53 571 aa27.15■■□□□ 1.94
EBF1-202ENST00000380654 NUDCQ9Y266 331 aa27.15■■□□□ 1.94
EBF1-202ENST00000380654 SPAG9O60271 1321 aaKnown RBP27.15■■□□□ 1.94
EBF1-202ENST00000380654 LAMC1P11047 1609 aa27.15■■□□□ 1.94
EBF1-202ENST00000380654 BRD4O60885 1362 aaPredicted RBP27.14■■□□□ 1.94
EBF1-202ENST00000380654 COL17A1Q9UMD9 1497 aaPredicted RBP27.13■■□□□ 1.93
EBF1-202ENST00000380654 EIF2AK4Q9P2K8 1649 aaKnown RBP27.12■■□□□ 1.93
EBF1-202ENST00000380654 LRPPRCP42704 1394 aaKnown RBP27.12■■□□□ 1.93
EBF1-202ENST00000380654 KTN1Q86UP2 1357 aaKnown RBP27.12■■□□□ 1.93
EBF1-202ENST00000380654 ZFYVE16Q7Z3T8 1539 aa27.12■■□□□ 1.93
EBF1-202ENST00000380654 PER1O15534 1290 aaPredicted RBP27.11■■□□□ 1.93
EBF1-202ENST00000380654 PARD3Q8TEW0 1356 aa27.08■■□□□ 1.93
EBF1-202ENST00000380654 RTEL1-TNFRSF6BF6WH68 1400 aa27.06■■□□□ 1.92
EBF1-202ENST00000380654 RNF17Q9BXT8 1623 aaKnown RBP27.05■■□□□ 1.92
EBF1-202ENST00000380654 ARAP3Q8WWN8 1544 aa27.05■■□□□ 1.92
EBF1-202ENST00000380654 WDR7Q9Y4E6 1490 aa27.05■■□□□ 1.92
EBF1-202ENST00000380654 NLRP13Q86W25 1043 aa27.04■■□□□ 1.92
EBF1-202ENST00000380654 CC2D1BQ5T0F9 858 aaKnown RBP27.03■■□□□ 1.92
EBF1-202ENST00000380654 PANK3Q9H999 370 aa27.02■■□□□ 1.92
EBF1-202ENST00000380654 FANCAO15360 1455 aa27.02■■□□□ 1.92
EBF1-202ENST00000380654 RNF123Q5XPI4 1314 aa27.02■■□□□ 1.92
EBF1-202ENST00000380654 MADDQ8WXG6 1647 aa27.01■■□□□ 1.91
EBF1-202ENST00000380654 SPHKAPQ2M3C7 1700 aa27.01■■□□□ 1.91
EBF1-202ENST00000380654 TRPM2O94759 1503 aa27■■□□□ 1.91
EBF1-202ENST00000380654 TMF1P82094 1093 aa27■■□□□ 1.91
EBF1-202ENST00000380654 ANP32EQ9BTT0 268 aa27■■□□□ 1.91
EBF1-202ENST00000380654 DEPDC5O75140 1603 aa27■■□□□ 1.91
EBF1-202ENST00000380654 ABCA9Q8IUA7 1624 aa27■■□□□ 1.91
EBF1-202ENST00000380654 SALL2Q9Y467 1007 aaPredicted RBP26.99■■□□□ 1.91
EBF1-202ENST00000380654 CLTCL1P53675 1640 aa26.99■■□□□ 1.91
EBF1-202ENST00000380654 ATP7AQ04656 1500 aa26.99■■□□□ 1.91
EBF1-202ENST00000380654 CEP152O94986 1710 aa26.98■■□□□ 1.91
EBF1-202ENST00000380654 MYT1LQ9UL68 1186 aa26.97■■□□□ 1.91
EBF1-202ENST00000380654 INO80Q9ULG1 1556 aaPredicted RBP26.97■■□□□ 1.91
EBF1-202ENST00000380654 PTPRTO14522 1441 aa26.96■■□□□ 1.91
EBF1-202ENST00000380654 SCAPERQ9BY12 1400 aa26.95■■□□□ 1.9
EBF1-202ENST00000380654 KIF3BO15066 747 aa26.94■■□□□ 1.9
EBF1-202ENST00000380654 TET3O43151 1660 aa26.94■■□□□ 1.9
EBF1-202ENST00000380654 IQGAP1P46940 1657 aa26.93■■□□□ 1.9
EBF1-202ENST00000380654 ADGRL1O94910 1474 aa26.93■■□□□ 1.9
EBF1-202ENST00000380654 WASHC2CQ9Y4E1 1318 aa26.91■■□□□ 1.9
EBF1-202ENST00000380654 MSH5O43196 834 aa26.89■■□□□ 1.9
EBF1-202ENST00000380654 VWDEQ8N2E2 1590 aa26.89■■□□□ 1.9
EBF1-202ENST00000380654 KANK1Q14678 1352 aa26.88■■□□□ 1.89
EBF1-202ENST00000380654 ASXL2Q76L83 1435 aa26.88■■□□□ 1.89
EBF1-202ENST00000380654 UGGT1Q9NYU2 1555 aa26.86■■□□□ 1.89
EBF1-202ENST00000380654 MROH1Q8NDA8 1641 aa26.86■■□□□ 1.89
EBF1-202ENST00000380654 CCDC136Q96JN2 1154 aa26.84■■□□□ 1.89
EBF1-202ENST00000380654 SCAF11Q99590 1463 aaKnown RBP26.84■■□□□ 1.89
EBF1-202ENST00000380654 FANCIQ9NVI1 1328 aa26.83■■□□□ 1.89
EBF1-202ENST00000380654 CDCA7LQ96GN5 454 aa26.82■■□□□ 1.88
EBF1-202ENST00000380654 KIDINS220Q9ULH0 1771 aa26.8■■□□□ 1.88
EBF1-202ENST00000380654 RRP1P56182 461 aaKnown RBP26.78■■□□□ 1.88
EBF1-202ENST00000380654 RCAN3Q9UKA8 241 aa26.78■■□□□ 1.88
EBF1-202ENST00000380654 BLMP54132 1417 aaPredicted RBP26.78■■□□□ 1.88
EBF1-202ENST00000380654 STAC3Q96MF2 364 aa26.77■■□□□ 1.88
EBF1-202ENST00000380654 KNSTRNQ9Y448 316 aa26.77■■□□□ 1.88
EBF1-202ENST00000380654 CFAP70Q5T0N1 1121 aa26.76■■□□□ 1.87
EBF1-202ENST00000380654 PDE3BQ13370 1112 aa26.74■■□□□ 1.87
EBF1-202ENST00000380654 AMER1Q5JTC6 1135 aaPredicted RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms