RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 GRIN2BQ13224 1484 aa8.53□□□□□ -1.04
RIPK1-202ENST00000380409 MAP7D2Q96T17 732 aa8.53□□□□□ -1.04
RIPK1-202ENST00000380409 FBXO3Q9UK99 471 aa8.53□□□□□ -1.04
RIPK1-202ENST00000380409 RRP7BPQ9NSQ0 103 aa8.53□□□□□ -1.04
RIPK1-202ENST00000380409 PHLDB1Q86UU1 1377 aa8.53□□□□□ -1.04
RIPK1-202ENST00000380409 KDM2BQ8NHM5 1336 aa8.53□□□□□ -1.04
RIPK1-202ENST00000380409 ZSCAN20P17040 1043 aaPredicted RBP8.53□□□□□ -1.04
RIPK1-202ENST00000380409 CANXP27824 592 aaKnown RBP8.53□□□□□ -1.04
RIPK1-202ENST00000380409 C8orf34Q49A92 452 aa8.53□□□□□ -1.04
RIPK1-202ENST00000380409 PTPN23Q9H3S7 1636 aa8.52□□□□□ -1.05
RIPK1-202ENST00000380409 PANK2Q9BZ23 570 aa8.52□□□□□ -1.05
RIPK1-202ENST00000380409 ANTXR1Q9H6X2 564 aa8.52□□□□□ -1.05
RIPK1-202ENST00000380409 CDK11BP21127 795 aaKnown RBP8.52□□□□□ -1.05
RIPK1-202ENST00000380409 TONSLQ96HA7 1378 aa8.52□□□□□ -1.05
RIPK1-202ENST00000380409 IGF1RP08069 1367 aa8.51□□□□□ -1.05
RIPK1-202ENST00000380409 LRPPRCP42704 1394 aaKnown RBP8.51□□□□□ -1.05
RIPK1-202ENST00000380409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.51□□□□□ -1.05
RIPK1-202ENST00000380409 ESPNB1AK53 854 aa8.51□□□□□ -1.05
RIPK1-202ENST00000380409 ZNF830Q96NB3 372 aaPredicted RBP8.51□□□□□ -1.05
RIPK1-202ENST00000380409 DENND4BO75064 1496 aaPredicted RBP8.51□□□□□ -1.05
RIPK1-202ENST00000380409 DHX29Q7Z478 1369 aaKnown RBP8.51□□□□□ -1.05
RIPK1-202ENST00000380409 SLC4A3P48751 1232 aa8.51□□□□□ -1.05
RIPK1-202ENST00000380409 SPATA31E1Q6ZUB1 1445 aa8.51□□□□□ -1.05
RIPK1-202ENST00000380409 USP19O94966 1318 aa8.5□□□□□ -1.05
RIPK1-202ENST00000380409 RRP1P56182 461 aaKnown RBP8.5□□□□□ -1.05
RIPK1-202ENST00000380409 TMEM132AQ24JP5 1023 aa8.5□□□□□ -1.05
RIPK1-202ENST00000380409 GCC2Q8IWJ2 1684 aa8.5□□□□□ -1.05
RIPK1-202ENST00000380409 BCORL1Q5H9F3 1711 aa8.5□□□□□ -1.05
RIPK1-202ENST00000380409 CCDC7Q96M83 1385 aa8.5□□□□□ -1.05
RIPK1-202ENST00000380409 TEX2Q8IWB9 1127 aa8.5□□□□□ -1.05
RIPK1-202ENST00000380409 ARHGAP35Q9NRY4 1499 aa8.49□□□□□ -1.05
RIPK1-202ENST00000380409 IGSF3O75054 1194 aa8.49□□□□□ -1.05
RIPK1-202ENST00000380409 PRDM2Q13029 1718 aa8.49□□□□□ -1.05
RIPK1-202ENST00000380409 SCAPERQ9BY12 1400 aa8.48□□□□□ -1.05
RIPK1-202ENST00000380409 FAM69CQ0P6D2 419 aa8.48□□□□□ -1.05
RIPK1-202ENST00000380409 KDM2AQ9Y2K7 1162 aa8.48□□□□□ -1.05
RIPK1-202ENST00000380409 PPP4R3BQ5MIZ7 849 aa8.48□□□□□ -1.05
RIPK1-202ENST00000380409 EXOC6Q8TAG9 804 aa8.48□□□□□ -1.05
RIPK1-202ENST00000380409 ZMYM4Q5VZL5 1548 aa8.48□□□□□ -1.05
RIPK1-202ENST00000380409 PRG4Q92954 1404 aaPredicted RBP8.48□□□□□ -1.05
RIPK1-202ENST00000380409 SHROOM2Q13796 1616 aa8.47□□□□□ -1.05
RIPK1-202ENST00000380409 LRRC9Q6ZRR7 1453 aa8.47□□□□□ -1.05
RIPK1-202ENST00000380409 OFD1O75665 1012 aa8.47□□□□□ -1.05
RIPK1-202ENST00000380409 FTSJ3Q8IY81 847 aaKnown RBP8.47□□□□□ -1.05
RIPK1-202ENST00000380409 CCDC144AA2RUR9 1427 aa8.47□□□□□ -1.05
RIPK1-202ENST00000380409 UACAQ9BZF9 1416 aa8.47□□□□□ -1.05
RIPK1-202ENST00000380409 ZHX1Q9UKY1 873 aaPredicted RBP8.47□□□□□ -1.05
RIPK1-202ENST00000380409 KIAA1211Q6ZU35 1233 aa8.47□□□□□ -1.05
RIPK1-202ENST00000380409 KIF20AO95235 890 aa8.46□□□□□ -1.05
RIPK1-202ENST00000380409 ISY1Q9ULR0 285 aaKnown RBP8.46□□□□□ -1.06
RIPK1-202ENST00000380409 KTN1Q86UP2 1357 aaKnown RBP8.45□□□□□ -1.06
RIPK1-202ENST00000380409 GOLGA6L3A6NEY3 463 aa8.45□□□□□ -1.06
RIPK1-202ENST00000380409 ZFP91Q96JP5 570 aaPredicted RBP8.45□□□□□ -1.06
RIPK1-202ENST00000380409 SYNJ2O15056 1496 aa8.45□□□□□ -1.06
RIPK1-202ENST00000380409 MRE11P49959 708 aa8.45□□□□□ -1.06
RIPK1-202ENST00000380409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.45□□□□□ -1.06
RIPK1-202ENST00000380409 ABCA10Q8WWZ4 1543 aa8.45□□□□□ -1.06
RIPK1-202ENST00000380409 TARBP1Q13395 1621 aaKnown RBP8.44□□□□□ -1.06
RIPK1-202ENST00000380409 SLC20A2Q08357 652 aa8.44□□□□□ -1.06
RIPK1-202ENST00000380409 MTERF4Q7Z6M4 381 aaKnown RBP8.44□□□□□ -1.06
RIPK1-202ENST00000380409 MRS2Q9HD23 443 aa8.44□□□□□ -1.06
RIPK1-202ENST00000380409 CCDC18Q5T9S5 1454 aa8.44□□□□□ -1.06
RIPK1-202ENST00000380409 NCLP19338 710 aaKnown RBP8.44□□□□□ -1.06
RIPK1-202ENST00000380409 RNF216Q9NWF9 866 aaPredicted RBP8.44□□□□□ -1.06
RIPK1-202ENST00000380409 ARID4BQ4LE39 1312 aaPredicted RBP8.44□□□□□ -1.06
RIPK1-202ENST00000380409 ARHGEF11O15085 1522 aa8.44□□□□□ -1.06
RIPK1-202ENST00000380409 MTUS2Q5JR59 1369 aa8.43□□□□□ -1.06
RIPK1-202ENST00000380409 HFM1A2PYH4 1435 aa8.43□□□□□ -1.06
RIPK1-202ENST00000380409 GRIN2AQ12879 1464 aa8.43□□□□□ -1.06
RIPK1-202ENST00000380409 FAM161AQ3B820 660 aa8.43□□□□□ -1.06
RIPK1-202ENST00000380409 GTPBP4Q9BZE4 634 aaKnown RBP8.43□□□□□ -1.06
RIPK1-202ENST00000380409 HSPA5P11021 654 aaKnown RBP8.42□□□□□ -1.06
RIPK1-202ENST00000380409 CHD1O14646 1710 aa8.42□□□□□ -1.06
RIPK1-202ENST00000380409 ARHGAP31Q2M1Z3 1444 aa8.42□□□□□ -1.06
RIPK1-202ENST00000380409 SKAP1Q86WV1 359 aa8.42□□□□□ -1.06
RIPK1-202ENST00000380409 CCDC94Q9BW85 323 aaPredicted RBP8.42□□□□□ -1.06
RIPK1-202ENST00000380409 PPP1R9BQ96SB3 815 aa8.41□□□□□ -1.06
RIPK1-202ENST00000380409 TEX14Q8IWB6 1497 aa8.41□□□□□ -1.06
RIPK1-202ENST00000380409 ERCC6L2Q5T890 1561 aa8.41□□□□□ -1.06
RIPK1-202ENST00000380409 RTEL1-TNFRSF6BF6WH68 1400 aa8.41□□□□□ -1.06
RIPK1-202ENST00000380409 NCOA3Q9Y6Q9 1424 aa8.41□□□□□ -1.06
RIPK1-202ENST00000380409 LETM1O95202 739 aaPredicted RBP8.41□□□□□ -1.06
RIPK1-202ENST00000380409 GRPEL1Q9HAV7 217 aa8.41□□□□□ -1.06
RIPK1-202ENST00000380409 PTPRGP23470 1445 aa8.41□□□□□ -1.06
RIPK1-202ENST00000380409 MAGI1Q96QZ7 1491 aaPredicted RBP8.4□□□□□ -1.06
RIPK1-202ENST00000380409 KDM5CP41229 1560 aa8.4□□□□□ -1.06
RIPK1-202ENST00000380409 INSRP06213 1382 aa8.4□□□□□ -1.06
RIPK1-202ENST00000380409 MMP14P50281 582 aa8.39□□□□□ -1.07
RIPK1-202ENST00000380409 RGS22Q8NE09 1264 aa8.39□□□□□ -1.07
RIPK1-202ENST00000380409 SECISBP2LQ93073 1101 aaKnown RBP8.39□□□□□ -1.07
RIPK1-202ENST00000380409 PCF11O94913 1555 aaKnown RBP8.39□□□□□ -1.07
RIPK1-202ENST00000380409 DYNC1I1O14576 645 aa8.39□□□□□ -1.07
RIPK1-202ENST00000380409 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.39□□□□□ -1.07
RIPK1-202ENST00000380409 PNISRQ8TF01 805 aaKnown RBP8.39□□□□□ -1.07
RIPK1-202ENST00000380409 HSP90B1P14625 803 aaKnown RBP8.38□□□□□ -1.07
RIPK1-202ENST00000380409 RGL3Q3MIN7 710 aa8.38□□□□□ -1.07
RIPK1-202ENST00000380409 TMC1Q8TDI8 760 aa8.38□□□□□ -1.07
RIPK1-202ENST00000380409 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.38□□□□□ -1.07
RIPK1-202ENST00000380409 ROCK2O75116 1388 aaKnown RBP8.38□□□□□ -1.07
RIPK1-202ENST00000380409 ZNF500O60304 480 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms