RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 TRIM6-TRIM34B2RNG4 842 aa5.25□□□□□ -1.57
BRCA2-201ENST00000380152 HNRNPMP52272 730 aaKnown RBP eCLIP5.25□□□□□ -1.57
BRCA2-201ENST00000380152 COG6Q9Y2V7 657 aa5.25□□□□□ -1.57
BRCA2-201ENST00000380152 FAM13BQ9NYF5 915 aa5.25□□□□□ -1.57
BRCA2-201ENST00000380152 NOL8Q76FK4 1167 aaKnown RBP5.24□□□□□ -1.57
BRCA2-201ENST00000380152 ANKRD45Q5TZF3 282 aa5.24□□□□□ -1.57
BRCA2-201ENST00000380152 PHLDB1Q86UU1 1377 aa5.24□□□□□ -1.57
BRCA2-201ENST00000380152 STK26Q9P289 416 aa5.24□□□□□ -1.57
BRCA2-201ENST00000380152 BRPF3Q9ULD4 1205 aa5.24□□□□□ -1.57
BRCA2-201ENST00000380152 NRDCO43847 1150 aa5.23□□□□□ -1.57
BRCA2-201ENST00000380152 LRRC9Q6ZRR7 1453 aa5.23□□□□□ -1.57
BRCA2-201ENST00000380152 TULP1O00294 542 aaPredicted RBP5.23□□□□□ -1.57
BRCA2-201ENST00000380152 CCDC184Q52MB2 194 aa5.23□□□□□ -1.57
BRCA2-201ENST00000380152 ST18O60284 1047 aa5.22□□□□□ -1.57
BRCA2-201ENST00000380152 KIAA1211Q6ZU35 1233 aa5.22□□□□□ -1.57
BRCA2-201ENST00000380152 A0A0G2JS52 829 aa5.22□□□□□ -1.57
BRCA2-201ENST00000380152 FRAT2O75474 233 aaPredicted RBP5.22□□□□□ -1.57
BRCA2-201ENST00000380152 FAM43AQ8N2R8 423 aa5.22□□□□□ -1.57
BRCA2-201ENST00000380152 PHF14O94880 888 aa5.22□□□□□ -1.57
BRCA2-201ENST00000380152 CNTLNQ9NXG0 1405 aa5.22□□□□□ -1.57
BRCA2-201ENST00000380152 TNNT3P45378 269 aaPredicted RBP5.22□□□□□ -1.57
BRCA2-201ENST00000380152 CDCA7LQ96GN5 454 aa5.22□□□□□ -1.57
BRCA2-201ENST00000380152 SKOR2Q2VWA4 1001 aaPredicted RBP5.22□□□□□ -1.57
BRCA2-201ENST00000380152 SLC4A10Q6U841 1118 aa5.22□□□□□ -1.57
BRCA2-201ENST00000380152 CCDC7Q96M83 1385 aa5.22□□□□□ -1.57
BRCA2-201ENST00000380152 E9PSI1 815 aa5.22□□□□□ -1.57
BRCA2-201ENST00000380152 RTF1Q92541 710 aaKnown RBP5.22□□□□□ -1.57
BRCA2-201ENST00000380152 PRKCSHP14314 528 aaPredicted RBP5.22□□□□□ -1.57
BRCA2-201ENST00000380152 APAF1O14727 1248 aa5.21□□□□□ -1.57
BRCA2-201ENST00000380152 UACAQ9BZF9 1416 aa5.21□□□□□ -1.57
BRCA2-201ENST00000380152 ELL2O00472 640 aaPredicted RBP5.21□□□□□ -1.57
BRCA2-201ENST00000380152 ANKRD30AQ9BXX3 1397 aa5.21□□□□□ -1.58
BRCA2-201ENST00000380152 MCTP1Q6DN14 999 aa5.21□□□□□ -1.58
BRCA2-201ENST00000380152 SYNJ1O43426 1573 aa5.21□□□□□ -1.58
BRCA2-201ENST00000380152 KIF7Q2M1P5 1343 aa5.21□□□□□ -1.58
BRCA2-201ENST00000380152 TRAK2O60296 914 aa5.21□□□□□ -1.58
BRCA2-201ENST00000380152 CCDC144AA2RUR9 1427 aa5.21□□□□□ -1.58
BRCA2-201ENST00000380152 BACH2Q9BYV9 841 aa5.2□□□□□ -1.58
BRCA2-201ENST00000380152 TDRD9Q8NDG6 1382 aaKnown RBP5.2□□□□□ -1.58
BRCA2-201ENST00000380152 KANK1Q14678 1352 aa5.2□□□□□ -1.58
BRCA2-201ENST00000380152 SUPT6HQ7KZ85 1726 aaKnown RBP5.2□□□□□ -1.58
BRCA2-201ENST00000380152 RILPL2Q969X0 211 aa5.2□□□□□ -1.58
BRCA2-201ENST00000380152 BCL11BQ9C0K0 894 aaPredicted RBP5.2□□□□□ -1.58
BRCA2-201ENST00000380152 GGT6Q6P531 493 aa5.2□□□□□ -1.58
BRCA2-201ENST00000380152 CHMP5Q9NZZ3 219 aa5.2□□□□□ -1.58
BRCA2-201ENST00000380152 HAP1P54257 671 aaPredicted RBP5.19□□□□□ -1.58
BRCA2-201ENST00000380152 ARAP1Q96P48 1450 aa5.19□□□□□ -1.58
BRCA2-201ENST00000380152 GNL2Q13823 731 aaKnown RBP5.19□□□□□ -1.58
BRCA2-201ENST00000380152 LMOD2Q6P5Q4 547 aa5.19□□□□□ -1.58
BRCA2-201ENST00000380152 EIF3AQ14152 1382 aaKnown RBP5.19□□□□□ -1.58
BRCA2-201ENST00000380152 HSP90B1P14625 803 aaKnown RBP5.19□□□□□ -1.58
BRCA2-201ENST00000380152 CGNL1Q0VF96 1302 aa5.19□□□□□ -1.58
BRCA2-201ENST00000380152 RRBP1Q9P2E9 1410 aaKnown RBP5.19□□□□□ -1.58
BRCA2-201ENST00000380152 PANK1Q8TE04 598 aa5.19□□□□□ -1.58
BRCA2-201ENST00000380152 ZNF771Q7L3S4 317 aaPredicted RBP5.19□□□□□ -1.58
BRCA2-201ENST00000380152 CHMP3Q9Y3E7 222 aa5.19□□□□□ -1.58
BRCA2-201ENST00000380152 CUX1P39880 1505 aa5.18□□□□□ -1.58
BRCA2-201ENST00000380152 C22orf23Q9BZE7 217 aa5.18□□□□□ -1.58
BRCA2-201ENST00000380152 NASPP49321 788 aaPredicted RBP5.18□□□□□ -1.58
BRCA2-201ENST00000380152 NUTM2DQ5VT03 806 aaPredicted RBP5.18□□□□□ -1.58
BRCA2-201ENST00000380152 TRAK1Q9UPV9 953 aa5.18□□□□□ -1.58
BRCA2-201ENST00000380152 LNPKQ9C0E8 428 aa5.18□□□□□ -1.58
BRCA2-201ENST00000380152 R3HCC1Q9Y3T6 440 aaKnown RBP5.18□□□□□ -1.58
BRCA2-201ENST00000380152 PKNOX2Q96KN3 472 aa5.18□□□□□ -1.58
BRCA2-201ENST00000380152 FGD6Q6ZV73 1430 aa5.18□□□□□ -1.58
BRCA2-201ENST00000380152 ERCC6Q03468 1493 aa5.18□□□□□ -1.58
BRCA2-201ENST00000380152 ZNF592Q92610 1267 aa5.18□□□□□ -1.58
BRCA2-201ENST00000380152 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.18□□□□□ -1.58
BRCA2-201ENST00000380152 CSPP1Q1MSJ5 1256 aa5.18□□□□□ -1.58
BRCA2-201ENST00000380152 GOLGA6L19H0YKK7 550 aa5.17□□□□□ -1.58
BRCA2-201ENST00000380152 ZKSCAN2Q63HK3 967 aa5.17□□□□□ -1.58
BRCA2-201ENST00000380152 RBM10P98175 930 aaKnown RBP5.17□□□□□ -1.58
BRCA2-201ENST00000380152 MRE11P49959 708 aa5.17□□□□□ -1.58
BRCA2-201ENST00000380152 HDGFL2Q7Z4V5 671 aaPredicted RBP5.17□□□□□ -1.58
BRCA2-201ENST00000380152 DDX19BQ9UMR2 479 aa5.17□□□□□ -1.58
BRCA2-201ENST00000380152 TIAM1Q13009 1591 aa5.17□□□□□ -1.58
BRCA2-201ENST00000380152 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.16□□□□□ -1.58
BRCA2-201ENST00000380152 BCAR3O75815 825 aa5.16□□□□□ -1.58
BRCA2-201ENST00000380152 ADAMTS8Q9UP79 889 aa5.16□□□□□ -1.58
BRCA2-201ENST00000380152 SPAG9O60271 1321 aaKnown RBP5.16□□□□□ -1.58
BRCA2-201ENST00000380152 ZNF644Q9H582 1327 aaPredicted RBP5.16□□□□□ -1.58
BRCA2-201ENST00000380152 SKAP1Q86WV1 359 aa5.16□□□□□ -1.58
BRCA2-201ENST00000380152 KIF16BQ96L93 1317 aa5.16□□□□□ -1.58
BRCA2-201ENST00000380152 KIF3BO15066 747 aa5.16□□□□□ -1.58
BRCA2-201ENST00000380152 ATAD2BQ9ULI0 1458 aa5.16□□□□□ -1.58
BRCA2-201ENST00000380152 NCAPD3P42695 1498 aa5.16□□□□□ -1.58
BRCA2-201ENST00000380152 CREBRFQ8IUR6 639 aa5.16□□□□□ -1.58
BRCA2-201ENST00000380152 DZIP1LQ8IYY4 767 aaKnown RBP5.16□□□□□ -1.58
BRCA2-201ENST00000380152 CAVIN1Q6NZI2 390 aaKnown RBP5.16□□□□□ -1.58
BRCA2-201ENST00000380152 TPM4P67936 248 aa5.15□□□□□ -1.58
BRCA2-201ENST00000380152 HTATSF1O43719 755 aaKnown RBP5.15□□□□□ -1.58
BRCA2-201ENST00000380152 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.15□□□□□ -1.58
BRCA2-201ENST00000380152 PNISRQ8TF01 805 aaKnown RBP5.15□□□□□ -1.58
BRCA2-201ENST00000380152 ERICH3Q5RHP9 1530 aa5.15□□□□□ -1.58
BRCA2-201ENST00000380152 HMMRO75330 724 aa5.15□□□□□ -1.58
BRCA2-201ENST00000380152 RNF214Q8ND24 703 aa5.15□□□□□ -1.58
BRCA2-201ENST00000380152 BRD4O60885 1362 aaPredicted RBP5.15□□□□□ -1.58
BRCA2-201ENST00000380152 A0A0U1RQG5 324 aaPredicted RBP5.15□□□□□ -1.59
BRCA2-201ENST00000380152 ATP6V1DQ9Y5K8 247 aa5.15□□□□□ -1.59
BRCA2-201ENST00000380152 CARMIL2Q6F5E8 1435 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms