RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 TEX14Q8IWB6 1497 aa9.23□□□□□ -0.93
DDX58-202ENST00000379883 UNC13AQ9UPW8 1703 aa9.23□□□□□ -0.93
DDX58-202ENST00000379883 CFTRP13569 1480 aa9.23□□□□□ -0.93
DDX58-202ENST00000379883 MCM4P33991 863 aa9.23□□□□□ -0.93
DDX58-202ENST00000379883 GZF1Q9H116 711 aaPredicted RBP9.23□□□□□ -0.93
DDX58-202ENST00000379883 ZMYM4Q5VZL5 1548 aa9.23□□□□□ -0.93
DDX58-202ENST00000379883 CDCA7LQ96GN5 454 aa9.23□□□□□ -0.93
DDX58-202ENST00000379883 GRPEL1Q9HAV7 217 aa9.23□□□□□ -0.93
DDX58-202ENST00000379883 TRAK2O60296 914 aa9.22□□□□□ -0.93
DDX58-202ENST00000379883 AAMPQ13685 434 aa9.22□□□□□ -0.93
DDX58-202ENST00000379883 FSD2A1L4K1 749 aa9.22□□□□□ -0.93
DDX58-202ENST00000379883 GOLGA2Q08379 1002 aa9.22□□□□□ -0.93
DDX58-202ENST00000379883 GBP4Q96PP9 640 aa9.22□□□□□ -0.93
DDX58-202ENST00000379883 GOLGA6L22H0YM25 854 aa9.21□□□□□ -0.93
DDX58-202ENST00000379883 CGNL1Q0VF96 1302 aa9.21□□□□□ -0.93
DDX58-202ENST00000379883 TERF1P54274 439 aa9.21□□□□□ -0.94
DDX58-202ENST00000379883 HSCBQ8IWL3 235 aa9.21□□□□□ -0.94
DDX58-202ENST00000379883 PMFBP1Q8TBY8 1022 aa9.21□□□□□ -0.94
DDX58-202ENST00000379883 NINLQ9Y2I6 1382 aa9.2□□□□□ -0.94
DDX58-202ENST00000379883 UGGT2Q9NYU1 1516 aa9.2□□□□□ -0.94
DDX58-202ENST00000379883 CCDC173Q0VFZ6 552 aa9.19□□□□□ -0.94
DDX58-202ENST00000379883 HMGXB3Q12766 1538 aa9.19□□□□□ -0.94
DDX58-202ENST00000379883 KIAA1211Q6ZU35 1233 aa9.18□□□□□ -0.94
DDX58-202ENST00000379883 SKAP1Q86WV1 359 aa9.18□□□□□ -0.94
DDX58-202ENST00000379883 PARD3Q8TEW0 1356 aa9.18□□□□□ -0.94
DDX58-202ENST00000379883 SNAPC4Q5SXM2 1469 aa9.18□□□□□ -0.94
DDX58-202ENST00000379883 BICRAQ9NZM4 1560 aa9.18□□□□□ -0.94
DDX58-202ENST00000379883 NGEFQ8N5V2 710 aa9.18□□□□□ -0.94
DDX58-202ENST00000379883 ANKRD30AQ9BXX3 1397 aa9.17□□□□□ -0.94
DDX58-202ENST00000379883 ST20-MTHFSA0A0A6YYL1 179 aa9.17□□□□□ -0.94
DDX58-202ENST00000379883 CSPP1Q1MSJ5 1256 aa9.17□□□□□ -0.94
DDX58-202ENST00000379883 ZMYM3Q14202 1370 aa9.17□□□□□ -0.94
DDX58-202ENST00000379883 BLMP54132 1417 aaPredicted RBP9.17□□□□□ -0.94
DDX58-202ENST00000379883 KIF14Q15058 1648 aa9.17□□□□□ -0.94
DDX58-202ENST00000379883 RALGAPBQ86X10 1494 aa9.16□□□□□ -0.94
DDX58-202ENST00000379883 KIAA1107Q9UPP5 1409 aa9.16□□□□□ -0.94
DDX58-202ENST00000379883 C20orf194Q5TEA3 1177 aa9.16□□□□□ -0.94
DDX58-202ENST00000379883 ZSCAN30Q86W11 494 aa9.16□□□□□ -0.94
DDX58-202ENST00000379883 CCDC144AA2RUR9 1427 aa9.16□□□□□ -0.94
DDX58-202ENST00000379883 PDE3AQ14432 1141 aa9.16□□□□□ -0.94
DDX58-202ENST00000379883 DENND4BO75064 1496 aaPredicted RBP9.15□□□□□ -0.94
DDX58-202ENST00000379883 CC2D1BQ5T0F9 858 aaKnown RBP9.15□□□□□ -0.94
DDX58-202ENST00000379883 SMAP1Q8IYB5 467 aaPredicted RBP9.15□□□□□ -0.94
DDX58-202ENST00000379883 PANK2Q9BZ23 570 aa9.15□□□□□ -0.94
DDX58-202ENST00000379883 GRIN2BQ13224 1484 aa9.15□□□□□ -0.94
DDX58-202ENST00000379883 RBM10P98175 930 aaKnown RBP9.15□□□□□ -0.95
DDX58-202ENST00000379883 RWDD1Q9H446 243 aaPredicted RBP9.15□□□□□ -0.95
DDX58-202ENST00000379883 PKD2Q13563 968 aa9.15□□□□□ -0.95
DDX58-202ENST00000379883 TBC1D32Q96NH3 1257 aa9.15□□□□□ -0.95
DDX58-202ENST00000379883 TBC1D2Q9BYX2 928 aa9.15□□□□□ -0.95
DDX58-202ENST00000379883 ANTXR1Q9H6X2 564 aa9.15□□□□□ -0.95
DDX58-202ENST00000379883 CIZ1Q9ULV3 898 aaPredicted RBP9.14□□□□□ -0.95
DDX58-202ENST00000379883 UHRF1BP1Q6BDS2 1440 aa9.14□□□□□ -0.95
DDX58-202ENST00000379883 CUL7Q14999 1698 aa9.14□□□□□ -0.95
DDX58-202ENST00000379883 OFD1O75665 1012 aa9.14□□□□□ -0.95
DDX58-202ENST00000379883 E9PSI1 815 aa9.14□□□□□ -0.95
DDX58-202ENST00000379883 CLUAP1Q96AJ1 413 aa9.14□□□□□ -0.95
DDX58-202ENST00000379883 KDM2AQ9Y2K7 1162 aa9.14□□□□□ -0.95
DDX58-202ENST00000379883 CC2D2AQ9P2K1 1620 aa9.13□□□□□ -0.95
DDX58-202ENST00000379883 KDM5CP41229 1560 aa9.13□□□□□ -0.95
DDX58-202ENST00000379883 DAPK1P53355 1430 aa9.13□□□□□ -0.95
DDX58-202ENST00000379883 FAM13BQ9NYF5 915 aa9.13□□□□□ -0.95
DDX58-202ENST00000379883 A0A0U1RQG5 324 aaPredicted RBP9.13□□□□□ -0.95
DDX58-202ENST00000379883 PLEKHG5O94827 1062 aa9.13□□□□□ -0.95
DDX58-202ENST00000379883 TMF1P82094 1093 aa9.13□□□□□ -0.95
DDX58-202ENST00000379883 DUSP27Q5VZP5 1158 aa9.13□□□□□ -0.95
DDX58-202ENST00000379883 SPRYD3Q8NCJ5 442 aa9.13□□□□□ -0.95
DDX58-202ENST00000379883 KNSTRNQ9Y448 316 aa9.13□□□□□ -0.95
DDX58-202ENST00000379883 HSP90AB1P08238 724 aaKnown RBP9.12□□□□□ -0.95
DDX58-202ENST00000379883 MBD5Q9P267 1494 aa9.12□□□□□ -0.95
DDX58-202ENST00000379883 HS1BP3Q53T59 392 aa9.12□□□□□ -0.95
DDX58-202ENST00000379883 ARHGEF11O15085 1522 aa9.12□□□□□ -0.95
DDX58-202ENST00000379883 NASPP49321 788 aaPredicted RBP9.12□□□□□ -0.95
DDX58-202ENST00000379883 CDCA8Q53HL2 280 aa9.12□□□□□ -0.95
DDX58-202ENST00000379883 CTTNBP2Q8WZ74 1663 aa9.11□□□□□ -0.95
DDX58-202ENST00000379883 C22orf23Q9BZE7 217 aa9.11□□□□□ -0.95
DDX58-202ENST00000379883 ARHGEF12Q9NZN5 1544 aa9.11□□□□□ -0.95
DDX58-202ENST00000379883 SLFN5Q08AF3 891 aa9.11□□□□□ -0.95
DDX58-202ENST00000379883 DYNC1I1O14576 645 aa9.1□□□□□ -0.95
DDX58-202ENST00000379883 CADPSQ9ULU8 1353 aa9.1□□□□□ -0.95
DDX58-202ENST00000379883 ADAMTS8Q9UP79 889 aa9.1□□□□□ -0.95
DDX58-202ENST00000379883 USP19O94966 1318 aa9.1□□□□□ -0.95
DDX58-202ENST00000379883 BCORL1Q5H9F3 1711 aa9.1□□□□□ -0.95
DDX58-202ENST00000379883 R3HCC1Q9Y3T6 440 aaKnown RBP9.1□□□□□ -0.95
DDX58-202ENST00000379883 NKTRP30414 1462 aaKnown RBP9.09□□□□□ -0.95
DDX58-202ENST00000379883 MCM5P33992 734 aa9.09□□□□□ -0.95
DDX58-202ENST00000379883 PANK3Q9H999 370 aa9.08□□□□□ -0.96
DDX58-202ENST00000379883 KDM6BO15054 1643 aa9.08□□□□□ -0.96
DDX58-202ENST00000379883 KIF21AQ7Z4S6 1674 aa9.08□□□□□ -0.96
DDX58-202ENST00000379883 ABCA10Q8WWZ4 1543 aa9.08□□□□□ -0.96
DDX58-202ENST00000379883 PPP1R9BQ96SB3 815 aa9.08□□□□□ -0.96
DDX58-202ENST00000379883 UQCRHLA0A096LP55 91 aa9.08□□□□□ -0.96
DDX58-202ENST00000379883 UQCRHP07919 91 aa9.08□□□□□ -0.96
DDX58-202ENST00000379883 MFAP1P55081 439 aaKnown RBP9.08□□□□□ -0.96
DDX58-202ENST00000379883 ABCC5O15440 1437 aa9.07□□□□□ -0.96
DDX58-202ENST00000379883 UTP14CQ5TAP6 766 aaKnown RBP9.07□□□□□ -0.96
DDX58-202ENST00000379883 IGHDP01880 384 aa9.07□□□□□ -0.96
DDX58-202ENST00000379883 TAF3Q5VWG9 929 aa9.07□□□□□ -0.96
DDX58-202ENST00000379883 SCAPERQ9BY12 1400 aa9.07□□□□□ -0.96
DDX58-202ENST00000379883 SEC24BO95487 1268 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms