RNA–Protein interactions for RNA: ENST00000379608.7

TFAP2A-202, Transcript of transcription factor AP-2 alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TFAP2A, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-202ENST00000379608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.19■■■□□ 2.1
TFAP2A-202ENST00000379608 ARID4BQ4LE39 1312 aaPredicted RBP28.18■■■□□ 2.1
TFAP2A-202ENST00000379608 SHANK2Q9UPX8 1470 aa28.14■■■□□ 2.1
TFAP2A-202ENST00000379608 MYBBP1AQ9BQG0 1328 aaKnown RBP28.14■■■□□ 2.1
TFAP2A-202ENST00000379608 LRPPRCP42704 1394 aaKnown RBP28.12■■■□□ 2.09
TFAP2A-202ENST00000379608 ARHGEF12Q9NZN5 1544 aa28.12■■■□□ 2.09
TFAP2A-202ENST00000379608 PTPRGP23470 1445 aa28.1■■■□□ 2.09
TFAP2A-202ENST00000379608 KDM5DQ9BY66 1539 aa28.09■■■□□ 2.09
TFAP2A-202ENST00000379608 EXOC6Q8TAG9 804 aa28.08■■■□□ 2.09
TFAP2A-202ENST00000379608 FAM135AQ9P2D6 1515 aa28.08■■■□□ 2.09
TFAP2A-202ENST00000379608 CC2D1BQ5T0F9 858 aaKnown RBP28.08■■■□□ 2.09
TFAP2A-202ENST00000379608 SAMD9LQ8IVG5 1584 aa28.07■■■□□ 2.08
TFAP2A-202ENST00000379608 NBR1Q14596 966 aa28.07■■■□□ 2.08
TFAP2A-202ENST00000379608 CDCA7LQ96GN5 454 aa28.07■■■□□ 2.08
TFAP2A-202ENST00000379608 BRD4O60885 1362 aaPredicted RBP28.06■■■□□ 2.08
TFAP2A-202ENST00000379608 RALBP1Q15311 655 aa28.05■■■□□ 2.08
TFAP2A-202ENST00000379608 NOP58Q9Y2X3 529 aaKnown RBP28.05■■■□□ 2.08
TFAP2A-202ENST00000379608 PRAG1Q86YV5 1406 aa28.03■■■□□ 2.08
TFAP2A-202ENST00000379608 RRP1P56182 461 aaKnown RBP28.03■■■□□ 2.08
TFAP2A-202ENST00000379608 E9PCH4 1651 aa28.02■■■□□ 2.08
TFAP2A-202ENST00000379608 PLA2R1Q13018 1463 aa28.02■■■□□ 2.08
TFAP2A-202ENST00000379608 CCDC144AA2RUR9 1427 aa28.02■■■□□ 2.08
TFAP2A-202ENST00000379608 CDC42BPBQ9Y5S2 1711 aa28.02■■■□□ 2.08
TFAP2A-202ENST00000379608 DISP3Q9P2K9 1392 aa28.01■■■□□ 2.07
TFAP2A-202ENST00000379608 CCDC141Q6ZP82 1450 aa28.01■■■□□ 2.07
TFAP2A-202ENST00000379608 PER1O15534 1290 aaPredicted RBP28.01■■■□□ 2.07
TFAP2A-202ENST00000379608 RCAN3Q9UKA8 241 aa27.99■■■□□ 2.07
TFAP2A-202ENST00000379608 SYCP2Q9BX26 1530 aa27.98■■■□□ 2.07
TFAP2A-202ENST00000379608 PLIN1O60240 522 aa27.98■■■□□ 2.07
TFAP2A-202ENST00000379608 NLRP13Q86W25 1043 aa27.98■■■□□ 2.07
TFAP2A-202ENST00000379608 SKAP1Q86WV1 359 aa27.98■■■□□ 2.07
TFAP2A-202ENST00000379608 KTN1Q86UP2 1357 aaKnown RBP27.98■■■□□ 2.07
TFAP2A-202ENST00000379608 ARHGEF5Q12774 1597 aa27.97■■■□□ 2.07
TFAP2A-202ENST00000379608 TRPM1Q7Z4N2 1603 aa27.97■■■□□ 2.07
TFAP2A-202ENST00000379608 A2MP01023 1474 aa27.97■■■□□ 2.07
TFAP2A-202ENST00000379608 PARD3Q8TEW0 1356 aa27.97■■■□□ 2.07
TFAP2A-202ENST00000379608 TESK2Q96S53 571 aa27.95■■■□□ 2.06
TFAP2A-202ENST00000379608 PANK3Q9H999 370 aa27.94■■■□□ 2.06
TFAP2A-202ENST00000379608 PLEKHH2Q8IVE3 1493 aa27.93■■■□□ 2.06
TFAP2A-202ENST00000379608 NPM2Q86SE8 214 aaKnown RBP27.92■■■□□ 2.06
TFAP2A-202ENST00000379608 TTC37Q6PGP7 1564 aa27.91■■■□□ 2.06
TFAP2A-202ENST00000379608 PREX2Q70Z35 1606 aa27.91■■■□□ 2.06
TFAP2A-202ENST00000379608 ARHGAP5Q13017 1502 aa27.89■■■□□ 2.06
TFAP2A-202ENST00000379608 DEKP35659 375 aaKnown RBP27.89■■■□□ 2.05
TFAP2A-202ENST00000379608 ANP32AP39687 249 aaKnown RBP27.87■■■□□ 2.05
TFAP2A-202ENST00000379608 IPO9Q96P70 1041 aaKnown RBP27.87■■■□□ 2.05
TFAP2A-202ENST00000379608 COL17A1Q9UMD9 1497 aaPredicted RBP27.85■■■□□ 2.05
TFAP2A-202ENST00000379608 CHD1O14646 1710 aa27.85■■■□□ 2.05
TFAP2A-202ENST00000379608 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.82■■■□□ 2.04
TFAP2A-202ENST00000379608 GPRASP1Q5JY77 1395 aa27.82■■■□□ 2.04
TFAP2A-202ENST00000379608 ERBINQ96RT1 1412 aa27.82■■■□□ 2.04
TFAP2A-202ENST00000379608 ERCC6L2Q5T890 1561 aa27.8■■■□□ 2.04
TFAP2A-202ENST00000379608 MYO5CQ9NQX4 1742 aa27.8■■■□□ 2.04
TFAP2A-202ENST00000379608 UNC13BO14795 1591 aa27.78■■■□□ 2.04
TFAP2A-202ENST00000379608 PRDM15P57071 1507 aaPredicted RBP27.78■■■□□ 2.04
TFAP2A-202ENST00000379608 RSPH4AQ5TD94 716 aa27.78■■■□□ 2.04
TFAP2A-202ENST00000379608 ZBTB47Q9UFB7 747 aaPredicted RBP27.78■■■□□ 2.04
TFAP2A-202ENST00000379608 C20orf194Q5TEA3 1177 aa27.77■■■□□ 2.04
TFAP2A-202ENST00000379608 CRBNQ96SW2 442 aa27.77■■■□□ 2.04
TFAP2A-202ENST00000379608 ADAMTS8Q9UP79 889 aa27.76■■■□□ 2.03
TFAP2A-202ENST00000379608 TMF1P82094 1093 aa27.75■■■□□ 2.03
TFAP2A-202ENST00000379608 PDE4AP27815 886 aa27.74■■■□□ 2.03
TFAP2A-202ENST00000379608 PDE3BQ13370 1112 aa27.73■■■□□ 2.03
TFAP2A-202ENST00000379608 SHROOM2Q13796 1616 aa27.71■■■□□ 2.03
TFAP2A-202ENST00000379608 BLMP54132 1417 aaPredicted RBP27.7■■■□□ 2.02
TFAP2A-202ENST00000379608 MAGI2Q86UL8 1455 aa27.7■■■□□ 2.02
TFAP2A-202ENST00000379608 IQGAP3Q86VI3 1631 aa27.7■■■□□ 2.02
TFAP2A-202ENST00000379608 MAST1Q9Y2H9 1570 aa27.68■■■□□ 2.02
TFAP2A-202ENST00000379608 TCERG1O14776 1098 aaKnown RBP27.66■■■□□ 2.02
TFAP2A-202ENST00000379608 LAS1LQ9Y4W2 734 aaKnown RBP27.65■■■□□ 2.02
TFAP2A-202ENST00000379608 TRAPPC8Q9Y2L5 1435 aa27.65■■■□□ 2.02
TFAP2A-202ENST00000379608 BACH2Q9BYV9 841 aa27.65■■■□□ 2.02
TFAP2A-202ENST00000379608 PLEKHH1Q9ULM0 1364 aa27.64■■■□□ 2.02
TFAP2A-202ENST00000379608 PPP2R1AP30153 589 aa27.63■■■□□ 2.01
TFAP2A-202ENST00000379608 AFAP1Q8N556 730 aa27.63■■■□□ 2.01
TFAP2A-202ENST00000379608 WDR7Q9Y4E6 1490 aa27.62■■■□□ 2.01
TFAP2A-202ENST00000379608 PLXNC1O60486 1568 aa27.61■■■□□ 2.01
TFAP2A-202ENST00000379608 WASHC2CQ9Y4E1 1318 aa27.61■■■□□ 2.01
TFAP2A-202ENST00000379608 DUOX2Q9NRD8 1548 aa27.61■■■□□ 2.01
TFAP2A-202ENST00000379608 KNSTRNQ9Y448 316 aa27.6■■■□□ 2.01
TFAP2A-202ENST00000379608 LAMC1P11047 1609 aa27.6■■■□□ 2.01
TFAP2A-202ENST00000379608 CCDC146Q8IYE0 955 aa27.6■■■□□ 2.01
TFAP2A-202ENST00000379608 ABCC2Q92887 1545 aa27.6■■■□□ 2.01
TFAP2A-202ENST00000379608 AMER1Q5JTC6 1135 aaPredicted RBP27.58■■■□□ 2.01
TFAP2A-202ENST00000379608 EIF2AK4Q9P2K8 1649 aaKnown RBP27.58■■■□□ 2.01
TFAP2A-202ENST00000379608 ZMYM4Q5VZL5 1548 aa27.57■■■□□ 2
TFAP2A-202ENST00000379608 ATP10AO60312 1499 aa27.55■■■□□ 2
TFAP2A-202ENST00000379608 WDR43Q15061 677 aaKnown RBP eCLIP27.55■■■□□ 2
TFAP2A-202ENST00000379608 MYT1LQ9UL68 1186 aa27.55■■■□□ 2
TFAP2A-202ENST00000379608 DUSP27Q5VZP5 1158 aa27.55■■■□□ 2
TFAP2A-202ENST00000379608 RNF17Q9BXT8 1623 aaKnown RBP27.54■■■□□ 2
TFAP2A-202ENST00000379608 EFCAB2Q5VUJ9 269 aa27.54■■■□□ 2
TFAP2A-202ENST00000379608 PLCH2O75038 1416 aa27.53■■■□□ 2
TFAP2A-202ENST00000379608 RTL5Q5HYW3 569 aaPredicted RBP27.53■■■□□ 2
TFAP2A-202ENST00000379608 SPINK5Q9NQ38 1064 aaPredicted RBP27.52■■■□□ 2
TFAP2A-202ENST00000379608 MADDQ8WXG6 1647 aa27.51■■■□□ 2
TFAP2A-202ENST00000379608 SPAG9O60271 1321 aaKnown RBP27.49■■□□□ 1.99
TFAP2A-202ENST00000379608 SLC4A3P48751 1232 aa27.49■■□□□ 1.99
TFAP2A-202ENST00000379608 MS4A1P11836 297 aa27.48■■□□□ 1.99
TFAP2A-202ENST00000379608 ZCCHC11Q5TAX3 1644 aaKnown RBP27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms