RNA–Protein interactions for RNA: ENST00000378752.7

OPTN-204, Transcript of optineurin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene OPTN, Length 3,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-204ENST00000378752 TARBP1Q13395 1621 aaKnown RBP11.96□□□□□ -0.49
OPTN-204ENST00000378752 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.49
OPTN-204ENST00000378752 TMF1P82094 1093 aa11.95□□□□□ -0.5
OPTN-204ENST00000378752 CLUAP1Q96AJ1 413 aa11.95□□□□□ -0.5
OPTN-204ENST00000378752 CTTNBP2Q8WZ74 1663 aa11.95□□□□□ -0.5
OPTN-204ENST00000378752 RRP7AQ9Y3A4 280 aaKnown RBP11.95□□□□□ -0.5
OPTN-204ENST00000378752 ANKRD50Q9ULJ7 1429 aa11.94□□□□□ -0.5
OPTN-204ENST00000378752 BRD4O60885 1362 aaPredicted RBP11.94□□□□□ -0.5
OPTN-204ENST00000378752 APAF1O14727 1248 aa11.94□□□□□ -0.5
OPTN-204ENST00000378752 KIAA1107Q9UPP5 1409 aa11.93□□□□□ -0.5
OPTN-204ENST00000378752 PDE3BQ13370 1112 aa11.93□□□□□ -0.5
OPTN-204ENST00000378752 ARID4BQ4LE39 1312 aaPredicted RBP11.93□□□□□ -0.5
OPTN-204ENST00000378752 BCAR3O75815 825 aa11.93□□□□□ -0.5
OPTN-204ENST00000378752 MS4A1P11836 297 aa11.93□□□□□ -0.5
OPTN-204ENST00000378752 TEX14Q8IWB6 1497 aa11.93□□□□□ -0.5
OPTN-204ENST00000378752 GOLGA2Q08379 1002 aa11.92□□□□□ -0.5
OPTN-204ENST00000378752 COG6Q9Y2V7 657 aa11.92□□□□□ -0.5
OPTN-204ENST00000378752 FAM161AQ3B820 660 aa11.92□□□□□ -0.5
OPTN-204ENST00000378752 USP35Q9P2H5 1018 aa11.92□□□□□ -0.5
OPTN-204ENST00000378752 SPATA31E1Q6ZUB1 1445 aa11.92□□□□□ -0.5
OPTN-204ENST00000378752 MIA2Q96PC5 1412 aa11.92□□□□□ -0.5
OPTN-204ENST00000378752 CUL7Q14999 1698 aa11.91□□□□□ -0.5
OPTN-204ENST00000378752 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
OPTN-204ENST00000378752 HECW1Q76N89 1606 aa11.9□□□□□ -0.51
OPTN-204ENST00000378752 ABCA5Q8WWZ7 1642 aa11.9□□□□□ -0.51
OPTN-204ENST00000378752 PANK1Q8TE04 598 aa11.9□□□□□ -0.51
OPTN-204ENST00000378752 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
OPTN-204ENST00000378752 LRRIQ1Q96JM4 1722 aa11.89□□□□□ -0.51
OPTN-204ENST00000378752 CENPQQ7L2Z9 268 aaPredicted RBP11.88□□□□□ -0.51
OPTN-204ENST00000378752 UPF2Q9HAU5 1272 aaKnown RBP11.88□□□□□ -0.51
OPTN-204ENST00000378752 CCDC144AA2RUR9 1427 aa11.88□□□□□ -0.51
OPTN-204ENST00000378752 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
OPTN-204ENST00000378752 BCORL1Q5H9F3 1711 aa11.86□□□□□ -0.51
OPTN-204ENST00000378752 POGKQ9P215 609 aa11.86□□□□□ -0.51
OPTN-204ENST00000378752 PLB1Q6P1J6 1458 aa11.86□□□□□ -0.51
OPTN-204ENST00000378752 PZPP20742 1482 aa11.85□□□□□ -0.51
OPTN-204ENST00000378752 BECN1Q14457 450 aa11.85□□□□□ -0.51
OPTN-204ENST00000378752 CAMSAP2Q08AD1 1489 aa11.85□□□□□ -0.51
OPTN-204ENST00000378752 ROCK1Q13464 1354 aa11.85□□□□□ -0.51
OPTN-204ENST00000378752 DISP3Q9P2K9 1392 aa11.85□□□□□ -0.51
OPTN-204ENST00000378752 PPP2R1AP30153 589 aa11.84□□□□□ -0.51
OPTN-204ENST00000378752 NAP1L5Q96NT1 182 aaPredicted RBP11.84□□□□□ -0.51
OPTN-204ENST00000378752 TCOF1Q13428 1488 aaKnown RBP11.84□□□□□ -0.51
OPTN-204ENST00000378752 IQGAP2Q13576 1575 aa11.84□□□□□ -0.51
OPTN-204ENST00000378752 SAFB2Q14151 953 aaKnown RBP eCLIP11.84□□□□□ -0.51
OPTN-204ENST00000378752 GCC2Q8IWJ2 1684 aa11.83□□□□□ -0.52
OPTN-204ENST00000378752 HSP90AA1P07900 732 aaKnown RBP11.82□□□□□ -0.52
OPTN-204ENST00000378752 MFAP1P55081 439 aaKnown RBP11.82□□□□□ -0.52
OPTN-204ENST00000378752 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
OPTN-204ENST00000378752 FOXD4L1Q9NU39 408 aa11.82□□□□□ -0.52
OPTN-204ENST00000378752 LRPPRCP42704 1394 aaKnown RBP11.81□□□□□ -0.52
OPTN-204ENST00000378752 C9orf84Q5VXU9 1444 aa11.81□□□□□ -0.52
OPTN-204ENST00000378752 SEC24BO95487 1268 aa11.81□□□□□ -0.52
OPTN-204ENST00000378752 DUSP27Q5VZP5 1158 aa11.81□□□□□ -0.52
OPTN-204ENST00000378752 PER1O15534 1290 aaPredicted RBP11.81□□□□□ -0.52
OPTN-204ENST00000378752 NUTM2DQ5VT03 806 aaPredicted RBP11.81□□□□□ -0.52
OPTN-204ENST00000378752 SAMD9Q5K651 1589 aa11.81□□□□□ -0.52
OPTN-204ENST00000378752 IGHDP01880 384 aa11.8□□□□□ -0.52
OPTN-204ENST00000378752 C8orf34Q49A92 452 aa11.8□□□□□ -0.52
OPTN-204ENST00000378752 TROQ12816 1431 aaPredicted RBP11.8□□□□□ -0.52
OPTN-204ENST00000378752 PBRM1Q86U86 1689 aa11.8□□□□□ -0.52
OPTN-204ENST00000378752 CENPJQ9HC77 1338 aaPredicted RBP11.8□□□□□ -0.52
OPTN-204ENST00000378752 ZNF608Q9ULD9 1512 aaPredicted RBP11.79□□□□□ -0.52
OPTN-204ENST00000378752 FTSJ3Q8IY81 847 aaKnown RBP11.79□□□□□ -0.52
OPTN-204ENST00000378752 PLEKHH1Q9ULM0 1364 aa11.79□□□□□ -0.52
OPTN-204ENST00000378752 ARHGEF11O15085 1522 aa11.79□□□□□ -0.52
OPTN-204ENST00000378752 TNNQ9UQP3 1299 aa11.79□□□□□ -0.52
OPTN-204ENST00000378752 NUP153P49790 1475 aaKnown RBP11.78□□□□□ -0.52
OPTN-204ENST00000378752 U2SURPO15042 1029 aaKnown RBP11.78□□□□□ -0.52
OPTN-204ENST00000378752 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
OPTN-204ENST00000378752 MORC1Q86VD1 984 aa11.77□□□□□ -0.53
OPTN-204ENST00000378752 GPATCH8Q9UKJ3 1502 aaKnown RBP11.76□□□□□ -0.53
OPTN-204ENST00000378752 PARD3Q8TEW0 1356 aa11.76□□□□□ -0.53
OPTN-204ENST00000378752 TESK2Q96S53 571 aa11.75□□□□□ -0.53
OPTN-204ENST00000378752 TRAK1Q9UPV9 953 aa11.75□□□□□ -0.53
OPTN-204ENST00000378752 KIAA0586Q9BVV6 1533 aa11.75□□□□□ -0.53
OPTN-204ENST00000378752 ERBINQ96RT1 1412 aa11.75□□□□□ -0.53
OPTN-204ENST00000378752 RALGAPBQ86X10 1494 aa11.75□□□□□ -0.53
OPTN-204ENST00000378752 SLFN5Q08AF3 891 aa11.74□□□□□ -0.53
OPTN-204ENST00000378752 CDCA8Q53HL2 280 aa11.74□□□□□ -0.53
OPTN-204ENST00000378752 WASHC2CQ9Y4E1 1318 aa11.74□□□□□ -0.53
OPTN-204ENST00000378752 U2AF1L5P0DN76 240 aaPredicted RBP11.74□□□□□ -0.53
OPTN-204ENST00000378752 U2AF1Q01081 240 aaKnown RBP eCLIP11.74□□□□□ -0.53
OPTN-204ENST00000378752 CARMIL2Q6F5E8 1435 aa11.74□□□□□ -0.53
OPTN-204ENST00000378752 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
OPTN-204ENST00000378752 TPRNQ4KMQ1 711 aa11.73□□□□□ -0.53
OPTN-204ENST00000378752 CFAP70Q5T0N1 1121 aa11.73□□□□□ -0.53
OPTN-204ENST00000378752 ZBTB7CA1YPR0 619 aa11.73□□□□□ -0.53
OPTN-204ENST00000378752 KDM5CP41229 1560 aa11.73□□□□□ -0.53
OPTN-204ENST00000378752 ITPRIPQ8IWB1 547 aa11.73□□□□□ -0.53
OPTN-204ENST00000378752 E9PSI1 815 aa11.72□□□□□ -0.53
OPTN-204ENST00000378752 PDZRN3Q9UPQ7 1066 aa11.72□□□□□ -0.53
OPTN-204ENST00000378752 IFT140Q96RY7 1462 aa11.72□□□□□ -0.53
OPTN-204ENST00000378752 EIF4G3O43432 1585 aaKnown RBP11.72□□□□□ -0.53
OPTN-204ENST00000378752 ARID3AQ99856 593 aa11.72□□□□□ -0.53
OPTN-204ENST00000378752 NCLP19338 710 aaKnown RBP11.71□□□□□ -0.53
OPTN-204ENST00000378752 KDM2BQ8NHM5 1336 aa11.71□□□□□ -0.53
OPTN-204ENST00000378752 GOLGA6L3A6NEY3 463 aa11.71□□□□□ -0.54
OPTN-204ENST00000378752 ERCC6Q03468 1493 aa11.7□□□□□ -0.54
OPTN-204ENST00000378752 KIF14Q15058 1648 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms