RNA–Protein interactions for RNA: ENST00000378748.7

OPTN-203, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,521 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-203ENST00000378748 ADAMTS8Q9UP79 889 aa11.15□□□□□ -0.62
OPTN-203ENST00000378748 U2SURPO15042 1029 aaKnown RBP11.15□□□□□ -0.62
OPTN-203ENST00000378748 NPM1P06748 294 aaKnown RBP eCLIP11.15□□□□□ -0.62
OPTN-203ENST00000378748 TMEM132EQ6IEE7 984 aa11.15□□□□□ -0.62
OPTN-203ENST00000378748 ARHGEF11O15085 1522 aa11.14□□□□□ -0.63
OPTN-203ENST00000378748 APAF1O14727 1248 aa11.14□□□□□ -0.63
OPTN-203ENST00000378748 KDM6BO15054 1643 aa11.14□□□□□ -0.63
OPTN-203ENST00000378748 MIA2Q96PC5 1412 aa11.14□□□□□ -0.63
OPTN-203ENST00000378748 MYBBP1AQ9BQG0 1328 aaKnown RBP11.13□□□□□ -0.63
OPTN-203ENST00000378748 RRP1P56182 461 aaKnown RBP11.13□□□□□ -0.63
OPTN-203ENST00000378748 C20orf194Q5TEA3 1177 aa11.13□□□□□ -0.63
OPTN-203ENST00000378748 CCDC144AA2RUR9 1427 aa11.13□□□□□ -0.63
OPTN-203ENST00000378748 ADAMTS12P58397 1594 aa11.13□□□□□ -0.63
OPTN-203ENST00000378748 PBRM1Q86U86 1689 aa11.12□□□□□ -0.63
OPTN-203ENST00000378748 CFAP70Q5T0N1 1121 aa11.12□□□□□ -0.63
OPTN-203ENST00000378748 UGGT2Q9NYU1 1516 aa11.11□□□□□ -0.63
OPTN-203ENST00000378748 KIAA0586Q9BVV6 1533 aa11.11□□□□□ -0.63
OPTN-203ENST00000378748 NUTM2FA1L443 756 aa11.11□□□□□ -0.63
OPTN-203ENST00000378748 SPAG9O60271 1321 aaKnown RBP11.11□□□□□ -0.63
OPTN-203ENST00000378748 RALBP1Q15311 655 aa11.1□□□□□ -0.63
OPTN-203ENST00000378748 EFCAB2Q5VUJ9 269 aa11.1□□□□□ -0.63
OPTN-203ENST00000378748 PDE4AP27815 886 aa11.09□□□□□ -0.63
OPTN-203ENST00000378748 TCOF1Q13428 1488 aaKnown RBP11.09□□□□□ -0.63
OPTN-203ENST00000378748 WDR62O43379 1518 aa11.09□□□□□ -0.63
OPTN-203ENST00000378748 TCERG1O14776 1098 aaKnown RBP11.09□□□□□ -0.63
OPTN-203ENST00000378748 ERICH6BQ5W0A0 696 aa11.08□□□□□ -0.64
OPTN-203ENST00000378748 C9orf84Q5VXU9 1444 aa11.08□□□□□ -0.64
OPTN-203ENST00000378748 MORC1Q86VD1 984 aa11.08□□□□□ -0.64
OPTN-203ENST00000378748 TROQ12816 1431 aaPredicted RBP11.08□□□□□ -0.64
OPTN-203ENST00000378748 NCOA1Q15788 1441 aa11.08□□□□□ -0.64
OPTN-203ENST00000378748 KIAA1107Q9UPP5 1409 aa11.08□□□□□ -0.64
OPTN-203ENST00000378748 SLKQ9H2G2 1235 aaPredicted RBP11.07□□□□□ -0.64
OPTN-203ENST00000378748 COG6Q9Y2V7 657 aa11.07□□□□□ -0.64
OPTN-203ENST00000378748 EIF5BO60841 1220 aaKnown RBP11.07□□□□□ -0.64
OPTN-203ENST00000378748 SRPK2P78362 688 aaKnown RBP11.07□□□□□ -0.64
OPTN-203ENST00000378748 IPO9Q96P70 1041 aaKnown RBP11.07□□□□□ -0.64
OPTN-203ENST00000378748 BCAR3O75815 825 aa11.06□□□□□ -0.64
OPTN-203ENST00000378748 CAMSAP2Q08AD1 1489 aa11.06□□□□□ -0.64
OPTN-203ENST00000378748 U2AF1L5P0DN76 240 aaPredicted RBP11.06□□□□□ -0.64
OPTN-203ENST00000378748 U2AF1Q01081 240 aaKnown RBP eCLIP11.06□□□□□ -0.64
OPTN-203ENST00000378748 MAGI1Q96QZ7 1491 aaPredicted RBP11.06□□□□□ -0.64
OPTN-203ENST00000378748 ELL2O00472 640 aaPredicted RBP11.05□□□□□ -0.64
OPTN-203ENST00000378748 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.05□□□□□ -0.64
OPTN-203ENST00000378748 NUP153P49790 1475 aaKnown RBP11.05□□□□□ -0.64
OPTN-203ENST00000378748 GOLGA2Q08379 1002 aa11.04□□□□□ -0.64
OPTN-203ENST00000378748 RPRD2Q5VT52 1461 aaKnown RBP11.04□□□□□ -0.64
OPTN-203ENST00000378748 PANK1Q8TE04 598 aa11.04□□□□□ -0.64
OPTN-203ENST00000378748 SLC12A5Q9H2X9 1139 aa11.03□□□□□ -0.64
OPTN-203ENST00000378748 ROCK1Q13464 1354 aa11.03□□□□□ -0.64
OPTN-203ENST00000378748 FANCIQ9NVI1 1328 aa11.03□□□□□ -0.64
OPTN-203ENST00000378748 TPRNQ4KMQ1 711 aa11.02□□□□□ -0.64
OPTN-203ENST00000378748 POGKQ9P215 609 aa11.02□□□□□ -0.64
OPTN-203ENST00000378748 GRIN2AQ12879 1464 aa11.02□□□□□ -0.64
OPTN-203ENST00000378748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.02□□□□□ -0.65
OPTN-203ENST00000378748 ZBTB7CA1YPR0 619 aa11.02□□□□□ -0.65
OPTN-203ENST00000378748 APBB1O00213 710 aa11.02□□□□□ -0.65
OPTN-203ENST00000378748 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.01□□□□□ -0.65
OPTN-203ENST00000378748 GPATCH8Q9UKJ3 1502 aaKnown RBP11.01□□□□□ -0.65
OPTN-203ENST00000378748 DISP3Q9P2K9 1392 aa11.01□□□□□ -0.65
OPTN-203ENST00000378748 PPP2R1AP30153 589 aa11.01□□□□□ -0.65
OPTN-203ENST00000378748 FBLN1P23142 703 aa11□□□□□ -0.65
OPTN-203ENST00000378748 KIAA0556O60303 1618 aa11□□□□□ -0.65
OPTN-203ENST00000378748 FTSJ3Q8IY81 847 aaKnown RBP11□□□□□ -0.65
OPTN-203ENST00000378748 MINK1Q8N4C8 1332 aaPredicted RBP11□□□□□ -0.65
OPTN-203ENST00000378748 SYNJ2O15056 1496 aa10.99□□□□□ -0.65
OPTN-203ENST00000378748 ARHGAP5Q13017 1502 aa10.99□□□□□ -0.65
OPTN-203ENST00000378748 CABP2Q9NPB3 220 aa10.99□□□□□ -0.65
OPTN-203ENST00000378748 GCC2Q8IWJ2 1684 aa10.99□□□□□ -0.65
OPTN-203ENST00000378748 CDCA8Q53HL2 280 aa10.98□□□□□ -0.65
OPTN-203ENST00000378748 GGNBP2Q9H3C7 697 aa10.98□□□□□ -0.65
OPTN-203ENST00000378748 WASHC2CQ9Y4E1 1318 aa10.98□□□□□ -0.65
OPTN-203ENST00000378748 DENND4BO75064 1496 aaPredicted RBP10.98□□□□□ -0.65
OPTN-203ENST00000378748 GZF1Q9H116 711 aaPredicted RBP10.98□□□□□ -0.65
OPTN-203ENST00000378748 PLEKHH2Q8IVE3 1493 aa10.98□□□□□ -0.65
OPTN-203ENST00000378748 RAPGEF3O95398 923 aa10.97□□□□□ -0.65
OPTN-203ENST00000378748 LRRIQ1Q96JM4 1722 aa10.97□□□□□ -0.65
OPTN-203ENST00000378748 RAPGEF6Q8TEU7 1601 aa10.97□□□□□ -0.65
OPTN-203ENST00000378748 DHX29Q7Z478 1369 aaKnown RBP10.97□□□□□ -0.65
OPTN-203ENST00000378748 FOXD4L1Q9NU39 408 aa10.97□□□□□ -0.65
OPTN-203ENST00000378748 DISP1Q96F81 1524 aa10.96□□□□□ -0.66
OPTN-203ENST00000378748 EIF4G3O43432 1585 aaKnown RBP10.96□□□□□ -0.66
OPTN-203ENST00000378748 HSP90AA1P07900 732 aaKnown RBP10.96□□□□□ -0.66
OPTN-203ENST00000378748 IL27Q8NEV9 243 aa10.96□□□□□ -0.66
OPTN-203ENST00000378748 SCAPERQ9BY12 1400 aa10.95□□□□□ -0.66
OPTN-203ENST00000378748 PZPP20742 1482 aa10.95□□□□□ -0.66
OPTN-203ENST00000378748 CYB5RLQ6IPT4 315 aa10.95□□□□□ -0.66
OPTN-203ENST00000378748 TSR2Q969E8 191 aaKnown RBP10.95□□□□□ -0.66
OPTN-203ENST00000378748 ESF1Q9H501 851 aaKnown RBP10.95□□□□□ -0.66
OPTN-203ENST00000378748 TNNQ9UQP3 1299 aa10.95□□□□□ -0.66
OPTN-203ENST00000378748 C14orf37Q86TY3 774 aa10.95□□□□□ -0.66
OPTN-203ENST00000378748 SPINK5Q9NQ38 1064 aaPredicted RBP10.95□□□□□ -0.66
OPTN-203ENST00000378748 ATP10BO94823 1461 aa10.95□□□□□ -0.66
OPTN-203ENST00000378748 ARID4BQ4LE39 1312 aaPredicted RBP10.94□□□□□ -0.66
OPTN-203ENST00000378748 ADGRF5Q8IZF2 1346 aa10.94□□□□□ -0.66
OPTN-203ENST00000378748 MTHFSP49914 203 aa10.94□□□□□ -0.66
OPTN-203ENST00000378748 CFAP53Q96M91 514 aa10.94□□□□□ -0.66
OPTN-203ENST00000378748 SMG6Q86US8 1419 aaKnown RBP10.94□□□□□ -0.66
OPTN-203ENST00000378748 BRD4O60885 1362 aaPredicted RBP10.94□□□□□ -0.66
OPTN-203ENST00000378748 ITPRIPQ8IWB1 547 aa10.93□□□□□ -0.66
OPTN-203ENST00000378748 KANK1Q14678 1352 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 519 ms