RNA–Protein interactions for RNA: ENST00000378747.7

OPTN-202, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-202ENST00000378747 ARAP3Q8WWN8 1544 aa12.31□□□□□ -0.44
OPTN-202ENST00000378747 NEFLP07196 543 aa12.3□□□□□ -0.44
OPTN-202ENST00000378747 PRAG1Q86YV5 1406 aa12.3□□□□□ -0.44
OPTN-202ENST00000378747 ABCC2Q92887 1545 aa12.29□□□□□ -0.44
OPTN-202ENST00000378747 UHRF1BP1LA0JNW5 1464 aa12.29□□□□□ -0.44
OPTN-202ENST00000378747 IQGAP1P46940 1657 aa12.29□□□□□ -0.44
OPTN-202ENST00000378747 HNRNPUQ00839 825 aaKnown RBP eCLIP12.28□□□□□ -0.44
OPTN-202ENST00000378747 CLASP1Q7Z460 1538 aa12.28□□□□□ -0.44
OPTN-202ENST00000378747 PLEKHH2Q8IVE3 1493 aa12.27□□□□□ -0.44
OPTN-202ENST00000378747 DUOX2Q9NRD8 1548 aa12.27□□□□□ -0.45
OPTN-202ENST00000378747 RSPH4AQ5TD94 716 aa12.27□□□□□ -0.45
OPTN-202ENST00000378747 SYCP2Q9BX26 1530 aa12.27□□□□□ -0.45
OPTN-202ENST00000378747 KIF15Q9NS87 1388 aa12.26□□□□□ -0.45
OPTN-202ENST00000378747 CEP152O94986 1710 aa12.26□□□□□ -0.45
OPTN-202ENST00000378747 ERBINQ96RT1 1412 aa12.26□□□□□ -0.45
OPTN-202ENST00000378747 VWDEQ8N2E2 1590 aa12.26□□□□□ -0.45
OPTN-202ENST00000378747 PPP4R2Q9NY27 417 aa12.26□□□□□ -0.45
OPTN-202ENST00000378747 KIAA1210Q9ULL0 1709 aa12.26□□□□□ -0.45
OPTN-202ENST00000378747 COL17A1Q9UMD9 1497 aaPredicted RBP12.26□□□□□ -0.45
OPTN-202ENST00000378747 SPHKAPQ2M3C7 1700 aa12.25□□□□□ -0.45
OPTN-202ENST00000378747 PKD2Q13563 968 aa12.25□□□□□ -0.45
OPTN-202ENST00000378747 A2MP01023 1474 aa12.25□□□□□ -0.45
OPTN-202ENST00000378747 ABCC1P33527 1531 aa12.25□□□□□ -0.45
OPTN-202ENST00000378747 CHMP7Q8WUX9 453 aaPredicted RBP12.24□□□□□ -0.45
OPTN-202ENST00000378747 MADDQ8WXG6 1647 aa12.24□□□□□ -0.45
OPTN-202ENST00000378747 BRD4O60885 1362 aaPredicted RBP12.24□□□□□ -0.45
OPTN-202ENST00000378747 PARD3Q8TEW0 1356 aa12.24□□□□□ -0.45
OPTN-202ENST00000378747 ZCCHC11Q5TAX3 1644 aaKnown RBP12.24□□□□□ -0.45
OPTN-202ENST00000378747 NUP155O75694 1391 aa12.23□□□□□ -0.45
OPTN-202ENST00000378747 PNISRQ8TF01 805 aaKnown RBP12.22□□□□□ -0.45
OPTN-202ENST00000378747 PLEKHD1A6NEE1 506 aa12.21□□□□□ -0.45
OPTN-202ENST00000378747 MSH5O43196 834 aa12.21□□□□□ -0.45
OPTN-202ENST00000378747 TRPM2O94759 1503 aa12.2□□□□□ -0.46
OPTN-202ENST00000378747 IFT172Q9UG01 1749 aa12.2□□□□□ -0.46
OPTN-202ENST00000378747 BLMP54132 1417 aaPredicted RBP12.2□□□□□ -0.46
OPTN-202ENST00000378747 MYOM1P52179 1685 aa12.2□□□□□ -0.46
OPTN-202ENST00000378747 MRS2Q9HD23 443 aa12.2□□□□□ -0.46
OPTN-202ENST00000378747 INO80Q9ULG1 1556 aaPredicted RBP12.19□□□□□ -0.46
OPTN-202ENST00000378747 OSCARQ8IYS5 282 aa12.19□□□□□ -0.46
OPTN-202ENST00000378747 ABCA9Q8IUA7 1624 aa12.19□□□□□ -0.46
OPTN-202ENST00000378747 ERCC6L2Q5T890 1561 aa12.19□□□□□ -0.46
OPTN-202ENST00000378747 WASHC2CQ9Y4E1 1318 aa12.18□□□□□ -0.46
OPTN-202ENST00000378747 PTPRTO14522 1441 aa12.18□□□□□ -0.46
OPTN-202ENST00000378747 RTEL1-TNFRSF6BF6WH68 1400 aa12.18□□□□□ -0.46
OPTN-202ENST00000378747 TET3O43151 1660 aa12.18□□□□□ -0.46
OPTN-202ENST00000378747 PLCH2O75038 1416 aa12.17□□□□□ -0.46
OPTN-202ENST00000378747 ARID3CA6NKF2 412 aa12.17□□□□□ -0.46
OPTN-202ENST00000378747 NUDCQ9Y266 331 aa12.17□□□□□ -0.46
OPTN-202ENST00000378747 ZFYVE16Q7Z3T8 1539 aa12.17□□□□□ -0.46
OPTN-202ENST00000378747 WDR7Q9Y4E6 1490 aa12.17□□□□□ -0.46
OPTN-202ENST00000378747 BCL11AQ9H165 835 aa12.17□□□□□ -0.46
OPTN-202ENST00000378747 PER1O15534 1290 aaPredicted RBP12.16□□□□□ -0.46
OPTN-202ENST00000378747 RALBP1Q15311 655 aa12.16□□□□□ -0.46
OPTN-202ENST00000378747 ARHGAP5Q13017 1502 aa12.16□□□□□ -0.46
OPTN-202ENST00000378747 SYNMO15061 1565 aa12.16□□□□□ -0.46
OPTN-202ENST00000378747 MYO3AQ8NEV4 1616 aa12.16□□□□□ -0.46
OPTN-202ENST00000378747 SCAPERQ9BY12 1400 aa12.16□□□□□ -0.46
OPTN-202ENST00000378747 MROH1Q8NDA8 1641 aa12.15□□□□□ -0.46
OPTN-202ENST00000378747 MYBBP1AQ9BQG0 1328 aaKnown RBP12.15□□□□□ -0.46
OPTN-202ENST00000378747 CCDC144AA2RUR9 1427 aa12.13□□□□□ -0.47
OPTN-202ENST00000378747 TESK2Q96S53 571 aa12.13□□□□□ -0.47
OPTN-202ENST00000378747 CLTCL1P53675 1640 aa12.13□□□□□ -0.47
OPTN-202ENST00000378747 TSPY4P0CV99 314 aa12.11□□□□□ -0.47
OPTN-202ENST00000378747 TSPY10P0CW01 314 aa12.11□□□□□ -0.47
OPTN-202ENST00000378747 HNRNPMP52272 730 aaKnown RBP eCLIP12.11□□□□□ -0.47
OPTN-202ENST00000378747 NRXN1Q9ULB1 1477 aa12.1□□□□□ -0.47
OPTN-202ENST00000378747 FAM9BQ8IZU0 186 aa12.1□□□□□ -0.47
OPTN-202ENST00000378747 CARD11Q9BXL7 1154 aa12.09□□□□□ -0.47
OPTN-202ENST00000378747 LMTK2Q8IWU2 1503 aa12.09□□□□□ -0.47
OPTN-202ENST00000378747 ZC3H13Q5T200 1668 aaKnown RBP12.09□□□□□ -0.47
OPTN-202ENST00000378747 ST20-MTHFSA0A0A6YYL1 179 aa12.09□□□□□ -0.47
OPTN-202ENST00000378747 MYOM2P54296 1465 aa12.08□□□□□ -0.48
OPTN-202ENST00000378747 DISP3Q9P2K9 1392 aa12.07□□□□□ -0.48
OPTN-202ENST00000378747 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
OPTN-202ENST00000378747 ZNF777Q9ULD5 760 aaPredicted RBP12.07□□□□□ -0.48
OPTN-202ENST00000378747 PDE3BQ13370 1112 aa12.07□□□□□ -0.48
OPTN-202ENST00000378747 STAC3Q96MF2 364 aa12.07□□□□□ -0.48
OPTN-202ENST00000378747 MAP3K4Q9Y6R4 1608 aa12.06□□□□□ -0.48
OPTN-202ENST00000378747 RIMBP3CA6NJZ7 1639 aa12.05□□□□□ -0.48
OPTN-202ENST00000378747 RIMBP3BA6NNM3 1639 aa12.05□□□□□ -0.48
OPTN-202ENST00000378747 RIMBP3Q9UFD9 1639 aa12.05□□□□□ -0.48
OPTN-202ENST00000378747 TRAPPC8Q9Y2L5 1435 aa12.05□□□□□ -0.48
OPTN-202ENST00000378747 IRX6P78412 446 aaPredicted RBP12.05□□□□□ -0.48
OPTN-202ENST00000378747 SETBP1Q9Y6X0 1596 aa12.05□□□□□ -0.48
OPTN-202ENST00000378747 NLRP13Q86W25 1043 aa12.04□□□□□ -0.48
OPTN-202ENST00000378747 USP32Q8NFA0 1604 aa12.04□□□□□ -0.48
OPTN-202ENST00000378747 DCAF11Q8TEB1 546 aa12.04□□□□□ -0.48
OPTN-202ENST00000378747 KDM5AP29375 1690 aaKnown RBP12.04□□□□□ -0.48
OPTN-202ENST00000378747 ABCA6Q8N139 1617 aa12.04□□□□□ -0.48
OPTN-202ENST00000378747 ATP7AQ04656 1500 aa12.03□□□□□ -0.48
OPTN-202ENST00000378747 MROH2AA6NES4 1674 aa12.02□□□□□ -0.48
OPTN-202ENST00000378747 EFCAB6Q5THR3 1501 aa12.02□□□□□ -0.48
OPTN-202ENST00000378747 SCAF11Q99590 1463 aaKnown RBP12.02□□□□□ -0.48
OPTN-202ENST00000378747 PIK3C2GO75747 1445 aa12.02□□□□□ -0.49
OPTN-202ENST00000378747 KIDINS220Q9ULH0 1771 aa12.01□□□□□ -0.49
OPTN-202ENST00000378747 B4GALNT3Q6L9W6 998 aa12.01□□□□□ -0.49
OPTN-202ENST00000378747 KIF1BO60333 1816 aa12.01□□□□□ -0.49
OPTN-202ENST00000378747 NBPF1Q3BBV0 1214 aa12□□□□□ -0.49
OPTN-202ENST00000378747 PPRC1Q5VV67 1664 aaKnown RBP12□□□□□ -0.49
OPTN-202ENST00000378747 ZNF521Q96K83 1311 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms