RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 ERICH6BQ5W0A0 696 aa20.7■□□□□ 0.9
RER1-203ENST00000378513 UHRF1BP1Q6BDS2 1440 aa20.69■□□□□ 0.9
RER1-203ENST00000378513 MYBBP1AQ9BQG0 1328 aaKnown RBP20.69■□□□□ 0.9
RER1-203ENST00000378513 FANCIQ9NVI1 1328 aa20.69■□□□□ 0.9
RER1-203ENST00000378513 SYCP2Q9BX26 1530 aa20.67■□□□□ 0.9
RER1-203ENST00000378513 FAM135AQ9P2D6 1515 aa20.67■□□□□ 0.9
RER1-203ENST00000378513 POLR1AO95602 1720 aaPredicted RBP20.67■□□□□ 0.9
RER1-203ENST00000378513 SAMD9LQ8IVG5 1584 aa20.67■□□□□ 0.9
RER1-203ENST00000378513 CCDC141Q6ZP82 1450 aa20.67■□□□□ 0.9
RER1-203ENST00000378513 PLEKHH2Q8IVE3 1493 aa20.67■□□□□ 0.9
RER1-203ENST00000378513 PLIN1O60240 522 aa20.66■□□□□ 0.9
RER1-203ENST00000378513 PANK3Q9H999 370 aa20.66■□□□□ 0.9
RER1-203ENST00000378513 ARHGAP5Q13017 1502 aa20.66■□□□□ 0.9
RER1-203ENST00000378513 EXOC6Q8TAG9 804 aa20.66■□□□□ 0.9
RER1-203ENST00000378513 DEKP35659 375 aaKnown RBP20.65■□□□□ 0.9
RER1-203ENST00000378513 SKAP1Q86WV1 359 aa20.65■□□□□ 0.9
RER1-203ENST00000378513 DISP3Q9P2K9 1392 aa20.65■□□□□ 0.9
RER1-203ENST00000378513 MYT1LQ9UL68 1186 aa20.64■□□□□ 0.89
RER1-203ENST00000378513 SHANK2Q9UPX8 1470 aa20.64■□□□□ 0.89
RER1-203ENST00000378513 ERCC6L2Q5T890 1561 aa20.63■□□□□ 0.89
RER1-203ENST00000378513 PLA2R1Q13018 1463 aa20.63■□□□□ 0.89
RER1-203ENST00000378513 ARID4BQ4LE39 1312 aaPredicted RBP20.63■□□□□ 0.89
RER1-203ENST00000378513 PAK3O75914 559 aaPredicted RBP20.63■□□□□ 0.89
RER1-203ENST00000378513 RALBP1Q15311 655 aa20.62■□□□□ 0.89
RER1-203ENST00000378513 PRAG1Q86YV5 1406 aa20.61■□□□□ 0.89
RER1-203ENST00000378513 AFAP1Q8N556 730 aa20.61■□□□□ 0.89
RER1-203ENST00000378513 CDC42BPBQ9Y5S2 1711 aa20.6■□□□□ 0.89
RER1-203ENST00000378513 KTN1Q86UP2 1357 aaKnown RBP20.6■□□□□ 0.89
RER1-203ENST00000378513 PER1O15534 1290 aaPredicted RBP20.6■□□□□ 0.89
RER1-203ENST00000378513 NPM2Q86SE8 214 aaKnown RBP20.6■□□□□ 0.89
RER1-203ENST00000378513 NLRP13Q86W25 1043 aa20.59■□□□□ 0.89
RER1-203ENST00000378513 TESK2Q96S53 571 aa20.59■□□□□ 0.89
RER1-203ENST00000378513 TTC37Q6PGP7 1564 aa20.59■□□□□ 0.89
RER1-203ENST00000378513 RCAN3Q9UKA8 241 aa20.58■□□□□ 0.89
RER1-203ENST00000378513 A2MP01023 1474 aa20.58■□□□□ 0.88
RER1-203ENST00000378513 ARHGEF12Q9NZN5 1544 aa20.58■□□□□ 0.88
RER1-203ENST00000378513 BRD4O60885 1362 aaPredicted RBP20.57■□□□□ 0.88
RER1-203ENST00000378513 KDM5DQ9BY66 1539 aa20.57■□□□□ 0.88
RER1-203ENST00000378513 RRP1P56182 461 aaKnown RBP20.56■□□□□ 0.88
RER1-203ENST00000378513 LRPPRCP42704 1394 aaKnown RBP20.56■□□□□ 0.88
RER1-203ENST00000378513 RNF123Q5XPI4 1314 aa20.55■□□□□ 0.88
RER1-203ENST00000378513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.53■□□□□ 0.884e-13■■■□□ 16.9
RER1-203ENST00000378513 RSPH4AQ5TD94 716 aa20.53■□□□□ 0.88
RER1-203ENST00000378513 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
RER1-203ENST00000378513 ARHGEF5Q12774 1597 aa20.51■□□□□ 0.87
RER1-203ENST00000378513 TMF1P82094 1093 aa20.51■□□□□ 0.87
RER1-203ENST00000378513 PARD3Q8TEW0 1356 aa20.5■□□□□ 0.87
RER1-203ENST00000378513 PREX2Q70Z35 1606 aa20.5■□□□□ 0.87
RER1-203ENST00000378513 ADAMTS8Q9UP79 889 aa20.49■□□□□ 0.87
RER1-203ENST00000378513 TRAPPC8Q9Y2L5 1435 aa20.49■□□□□ 0.87
RER1-203ENST00000378513 EFCAB2Q5VUJ9 269 aa20.48■□□□□ 0.87
RER1-203ENST00000378513 NOP58Q9Y2X3 529 aaKnown RBP20.48■□□□□ 0.87
RER1-203ENST00000378513 ERBINQ96RT1 1412 aa20.48■□□□□ 0.87
RER1-203ENST00000378513 CHD1O14646 1710 aa20.47■□□□□ 0.87
RER1-203ENST00000378513 C20orf194Q5TEA3 1177 aa20.46■□□□□ 0.87
RER1-203ENST00000378513 TRPM1Q7Z4N2 1603 aa20.46■□□□□ 0.87
RER1-203ENST00000378513 CCDC146Q8IYE0 955 aa20.45■□□□□ 0.86
RER1-203ENST00000378513 SPAG9O60271 1321 aaKnown RBP20.45■□□□□ 0.86
RER1-203ENST00000378513 CRBNQ96SW2 442 aa20.43■□□□□ 0.86
RER1-203ENST00000378513 RTN4Q9NQC3 1192 aaKnown RBP20.43■□□□□ 0.86
RER1-203ENST00000378513 KNSTRNQ9Y448 316 aa20.43■□□□□ 0.86
RER1-203ENST00000378513 ANP32AP39687 249 aaKnown RBP20.43■□□□□ 0.86
RER1-203ENST00000378513 COL17A1Q9UMD9 1497 aaPredicted RBP20.42■□□□□ 0.86
RER1-203ENST00000378513 KIF3BO15066 747 aa20.41■□□□□ 0.86
RER1-203ENST00000378513 RTL5Q5HYW3 569 aaPredicted RBP20.4■□□□□ 0.86
RER1-203ENST00000378513 CHGAP10645 457 aaKnown RBP20.39■□□□□ 0.85
RER1-203ENST00000378513 GPRASP1Q5JY77 1395 aa20.39■□□□□ 0.85
RER1-203ENST00000378513 E9PCH4 1651 aa20.38■□□□□ 0.85
RER1-203ENST00000378513 PPP2R1AP30153 589 aa20.38■□□□□ 0.85
RER1-203ENST00000378513 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
RER1-203ENST00000378513 CFAP70Q5T0N1 1121 aa20.37■□□□□ 0.85
RER1-203ENST00000378513 MAGI2Q86UL8 1455 aa20.36■□□□□ 0.85
RER1-203ENST00000378513 TNNT2P45379 298 aaPredicted RBP20.36■□□□□ 0.85
RER1-203ENST00000378513 ABCC2Q92887 1545 aa20.35■□□□□ 0.85
RER1-203ENST00000378513 PLCH2O75038 1416 aa20.35■□□□□ 0.85
RER1-203ENST00000378513 IPO9Q96P70 1041 aaKnown RBP20.35■□□□□ 0.85
RER1-203ENST00000378513 ZBTB47Q9UFB7 747 aaPredicted RBP20.35■□□□□ 0.85
RER1-203ENST00000378513 UNC13BO14795 1591 aa20.34■□□□□ 0.85
RER1-203ENST00000378513 PRDM15P57071 1507 aaPredicted RBP20.33■□□□□ 0.85
RER1-203ENST00000378513 MYO5CQ9NQX4 1742 aa20.33■□□□□ 0.85
RER1-203ENST00000378513 PDE4AP27815 886 aa20.33■□□□□ 0.84
RER1-203ENST00000378513 LAS1LQ9Y4W2 734 aaKnown RBP20.33■□□□□ 0.84
RER1-203ENST00000378513 DUOX2Q9NRD8 1548 aa20.33■□□□□ 0.84
RER1-203ENST00000378513 PLEKHH1Q9ULM0 1364 aa20.32■□□□□ 0.84
RER1-203ENST00000378513 PDE3BQ13370 1112 aa20.32■□□□□ 0.84
RER1-203ENST00000378513 AMER1Q5JTC6 1135 aaPredicted RBP20.32■□□□□ 0.84
RER1-203ENST00000378513 NUTM2DQ5VT03 806 aaPredicted RBP20.31■□□□□ 0.84
RER1-203ENST00000378513 ANO8Q9HCE9 1232 aaPredicted RBP20.3■□□□□ 0.84
RER1-203ENST00000378513 IQGAP3Q86VI3 1631 aa20.3■□□□□ 0.84
RER1-203ENST00000378513 ADGRF5Q8IZF2 1346 aa20.3■□□□□ 0.84
RER1-203ENST00000378513 SPINK5Q9NQ38 1064 aaPredicted RBP20.29■□□□□ 0.84
RER1-203ENST00000378513 SCAPERQ9BY12 1400 aa20.29■□□□□ 0.84
RER1-203ENST00000378513 WDR7Q9Y4E6 1490 aa20.28■□□□□ 0.84
RER1-203ENST00000378513 APAF1O14727 1248 aa20.28■□□□□ 0.84
RER1-203ENST00000378513 UGGT1Q9NYU2 1555 aa20.27■□□□□ 0.84
RER1-203ENST00000378513 MAST1Q9Y2H9 1570 aa20.27■□□□□ 0.84
RER1-203ENST00000378513 NEUROD2Q15784 382 aa20.27■□□□□ 0.84
RER1-203ENST00000378513 PRKCSHP14314 528 aaPredicted RBP20.27■□□□□ 0.84
RER1-203ENST00000378513 ATP10AO60312 1499 aa20.25■□□□□ 0.83
RER1-203ENST00000378513 DMRT2Q9Y5R5 561 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms