RNA–Protein interactions for RNA: ENST00000378126.4

PCDHA6-201, Transcript of protocadherin alpha 6, humanhuman

BASIC

Gene PCDHA6, Length 3,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-201ENST00000378126 SHANK2Q9UPX8 1470 aa18.74■□□□□ 0.59
PCDHA6-201ENST00000378126 EFCAB2Q5VUJ9 269 aa18.73■□□□□ 0.59
PCDHA6-201ENST00000378126 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.73■□□□□ 0.59
PCDHA6-201ENST00000378126 KDM5CP41229 1560 aa18.72■□□□□ 0.59
PCDHA6-201ENST00000378126 RALGAPBQ86X10 1494 aa18.71■□□□□ 0.59
PCDHA6-201ENST00000378126 RSPH4AQ5TD94 716 aa18.71■□□□□ 0.59
PCDHA6-201ENST00000378126 PNISRQ8TF01 805 aaKnown RBP18.71■□□□□ 0.59
PCDHA6-201ENST00000378126 PPP4R2Q9NY27 417 aa18.71■□□□□ 0.59
PCDHA6-201ENST00000378126 ARHGEF12Q9NZN5 1544 aa18.7■□□□□ 0.58
PCDHA6-201ENST00000378126 SPAG9O60271 1321 aaKnown RBP18.69■□□□□ 0.58
PCDHA6-201ENST00000378126 TRAPPC8Q9Y2L5 1435 aa18.68■□□□□ 0.58
PCDHA6-201ENST00000378126 PLA2R1Q13018 1463 aa18.67■□□□□ 0.58
PCDHA6-201ENST00000378126 PANK3Q9H999 370 aa18.67■□□□□ 0.58
PCDHA6-201ENST00000378126 PREX2Q70Z35 1606 aa18.67■□□□□ 0.58
PCDHA6-201ENST00000378126 UHRF1BP1Q6BDS2 1440 aa18.66■□□□□ 0.58
PCDHA6-201ENST00000378126 DISP3Q9P2K9 1392 aa18.65■□□□□ 0.58
PCDHA6-201ENST00000378126 KIF3BO15066 747 aa18.65■□□□□ 0.58
PCDHA6-201ENST00000378126 NUDCQ9Y266 331 aa18.65■□□□□ 0.58
PCDHA6-201ENST00000378126 CHGAP10645 457 aaKnown RBP18.64■□□□□ 0.58
PCDHA6-201ENST00000378126 ARHGEF5Q12774 1597 aa18.64■□□□□ 0.57
PCDHA6-201ENST00000378126 PRAG1Q86YV5 1406 aa18.64■□□□□ 0.57
PCDHA6-201ENST00000378126 MYBBP1AQ9BQG0 1328 aaKnown RBP18.63■□□□□ 0.57
PCDHA6-201ENST00000378126 ABCC2Q92887 1545 aa18.63■□□□□ 0.57
PCDHA6-201ENST00000378126 A2MP01023 1474 aa18.63■□□□□ 0.57
PCDHA6-201ENST00000378126 BCL11AQ9H165 835 aa18.62■□□□□ 0.57
PCDHA6-201ENST00000378126 CCDC136Q96JN2 1154 aa18.61■□□□□ 0.57
PCDHA6-201ENST00000378126 CDCA7LQ96GN5 454 aa18.61■□□□□ 0.57
PCDHA6-201ENST00000378126 ANP32EQ9BTT0 268 aa18.6■□□□□ 0.57
PCDHA6-201ENST00000378126 KTN1Q86UP2 1357 aaKnown RBP18.6■□□□□ 0.57
PCDHA6-201ENST00000378126 TESK2Q96S53 571 aa18.59■□□□□ 0.57
PCDHA6-201ENST00000378126 ARID4BQ4LE39 1312 aaPredicted RBP18.59■□□□□ 0.57
PCDHA6-201ENST00000378126 KDM5DQ9BY66 1539 aa18.59■□□□□ 0.57
PCDHA6-201ENST00000378126 PLCH2O75038 1416 aa18.58■□□□□ 0.56
PCDHA6-201ENST00000378126 MSH5O43196 834 aa18.58■□□□□ 0.56
PCDHA6-201ENST00000378126 TMF1P82094 1093 aa18.58■□□□□ 0.56
PCDHA6-201ENST00000378126 RALBP1Q15311 655 aa18.58■□□□□ 0.56
PCDHA6-201ENST00000378126 NLRP13Q86W25 1043 aa18.56■□□□□ 0.56
PCDHA6-201ENST00000378126 SCAPERQ9BY12 1400 aa18.55■□□□□ 0.56
PCDHA6-201ENST00000378126 POLR1AO95602 1720 aaPredicted RBP18.55■□□□□ 0.56
PCDHA6-201ENST00000378126 PLIN1O60240 522 aa18.55■□□□□ 0.56
PCDHA6-201ENST00000378126 MYO5CQ9NQX4 1742 aa18.55■□□□□ 0.56
PCDHA6-201ENST00000378126 PER1O15534 1290 aaPredicted RBP18.54■□□□□ 0.56
PCDHA6-201ENST00000378126 NUTM2DQ5VT03 806 aaPredicted RBP18.54■□□□□ 0.56
PCDHA6-201ENST00000378126 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
PCDHA6-201ENST00000378126 ZCCHC11Q5TAX3 1644 aaKnown RBP18.53■□□□□ 0.56
PCDHA6-201ENST00000378126 ERICH6Q7L0X2 663 aa18.52■□□□□ 0.56
PCDHA6-201ENST00000378126 GGT6Q6P531 493 aa18.52■□□□□ 0.56
PCDHA6-201ENST00000378126 ERBINQ96RT1 1412 aa18.52■□□□□ 0.55
PCDHA6-201ENST00000378126 CFAP70Q5T0N1 1121 aa18.51■□□□□ 0.55
PCDHA6-201ENST00000378126 BRD4O60885 1362 aaPredicted RBP18.5■□□□□ 0.55
PCDHA6-201ENST00000378126 EXOC6Q8TAG9 804 aa18.5■□□□□ 0.55
PCDHA6-201ENST00000378126 KNSTRNQ9Y448 316 aa18.5■□□□□ 0.55
PCDHA6-201ENST00000378126 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
PCDHA6-201ENST00000378126 DUOX2Q9NRD8 1548 aa18.5■□□□□ 0.55
PCDHA6-201ENST00000378126 RCAN3Q9UKA8 241 aa18.47■□□□□ 0.55
PCDHA6-201ENST00000378126 TRPM1Q7Z4N2 1603 aa18.47■□□□□ 0.55
PCDHA6-201ENST00000378126 TNNT2P45379 298 aaPredicted RBP18.47■□□□□ 0.55
PCDHA6-201ENST00000378126 SKAP1Q86WV1 359 aa18.47■□□□□ 0.55
PCDHA6-201ENST00000378126 CCDC146Q8IYE0 955 aa18.46■□□□□ 0.55
PCDHA6-201ENST00000378126 ADAMTS8Q9UP79 889 aa18.46■□□□□ 0.55
PCDHA6-201ENST00000378126 ERICH6BQ5W0A0 696 aa18.45■□□□□ 0.54
PCDHA6-201ENST00000378126 UNC13BO14795 1591 aa18.45■□□□□ 0.54
PCDHA6-201ENST00000378126 FANCAO15360 1455 aa18.44■□□□□ 0.54
PCDHA6-201ENST00000378126 PARD3Q8TEW0 1356 aa18.44■□□□□ 0.54
PCDHA6-201ENST00000378126 NPM1P06748 294 aaKnown RBP eCLIP18.44■□□□□ 0.54
PCDHA6-201ENST00000378126 LRPPRCP42704 1394 aaKnown RBP18.44■□□□□ 0.54
PCDHA6-201ENST00000378126 ABCC1P33527 1531 aa18.44■□□□□ 0.54
PCDHA6-201ENST00000378126 ADGRF5Q8IZF2 1346 aa18.44■□□□□ 0.54
PCDHA6-201ENST00000378126 UGGT1Q9NYU2 1555 aa18.43■□□□□ 0.54
PCDHA6-201ENST00000378126 RRP1P56182 461 aaKnown RBP18.43■□□□□ 0.54
PCDHA6-201ENST00000378126 COL17A1Q9UMD9 1497 aaPredicted RBP18.43■□□□□ 0.54
PCDHA6-201ENST00000378126 MAST1Q9Y2H9 1570 aa18.42■□□□□ 0.54
PCDHA6-201ENST00000378126 WDR43Q15061 677 aaKnown RBP eCLIP18.42■□□□□ 0.54
PCDHA6-201ENST00000378126 NPM2Q86SE8 214 aaKnown RBP18.42■□□□□ 0.54
PCDHA6-201ENST00000378126 KANK1Q14678 1352 aa18.42■□□□□ 0.54
PCDHA6-201ENST00000378126 GPRASP1Q5JY77 1395 aa18.41■□□□□ 0.54
PCDHA6-201ENST00000378126 IQGAP3Q86VI3 1631 aa18.41■□□□□ 0.54
PCDHA6-201ENST00000378126 TMEM132EQ6IEE7 984 aa18.4■□□□□ 0.54
PCDHA6-201ENST00000378126 TRAK1Q9UPV9 953 aa18.4■□□□□ 0.54
PCDHA6-201ENST00000378126 ADGRL1O94910 1474 aa18.4■□□□□ 0.54
PCDHA6-201ENST00000378126 PLXNC1O60486 1568 aa18.4■□□□□ 0.54
PCDHA6-201ENST00000378126 SAFB2Q14151 953 aaKnown RBP eCLIP18.4■□□□□ 0.54
PCDHA6-201ENST00000378126 ATP10AO60312 1499 aa18.39■□□□□ 0.53
PCDHA6-201ENST00000378126 PPP2R1AP30153 589 aa18.39■□□□□ 0.53
PCDHA6-201ENST00000378126 CLASP1Q7Z460 1538 aa18.38■□□□□ 0.53
PCDHA6-201ENST00000378126 WDR7Q9Y4E6 1490 aa18.38■□□□□ 0.53
PCDHA6-201ENST00000378126 RAPGEF3O95398 923 aa18.38■□□□□ 0.53
PCDHA6-201ENST00000378126 ASXL2Q76L83 1435 aa18.37■□□□□ 0.53
PCDHA6-201ENST00000378126 CFAP65Q6ZU64 1925 aaKnown RBP18.36■□□□□ 0.53
PCDHA6-201ENST00000378126 MAGI2Q86UL8 1455 aa18.36■□□□□ 0.53
PCDHA6-201ENST00000378126 PRDM15P57071 1507 aaPredicted RBP18.36■□□□□ 0.53
PCDHA6-201ENST00000378126 ZFYVE16Q7Z3T8 1539 aa18.35■□□□□ 0.53
PCDHA6-201ENST00000378126 E9PCH4 1651 aa18.35■□□□□ 0.53
PCDHA6-201ENST00000378126 C20orf194Q5TEA3 1177 aa18.34■□□□□ 0.53
PCDHA6-201ENST00000378126 NEUROD2Q15784 382 aa18.34■□□□□ 0.53
PCDHA6-201ENST00000378126 RNF123Q5XPI4 1314 aa18.33■□□□□ 0.52
PCDHA6-201ENST00000378126 AMER1Q5JTC6 1135 aaPredicted RBP18.33■□□□□ 0.52
PCDHA6-201ENST00000378126 UHRF1BP1LA0JNW5 1464 aa18.32■□□□□ 0.52
PCDHA6-201ENST00000378126 CRBNQ96SW2 442 aa18.32■□□□□ 0.52
PCDHA6-201ENST00000378126 ATP7AQ04656 1500 aa18.32■□□□□ 0.52
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