RNA–Protein interactions for RNA: ENST00000377707.3

SHB-201, Transcript of SH2 domain containing adaptor protein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHB, Length 2,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHB-201ENST00000377707 TSPY10P0CW01 314 aa27.33■■□□□ 1.97
SHB-201ENST00000377707 RGL3Q3MIN7 710 aa27.32■■□□□ 1.96
SHB-201ENST00000377707 CDC42BPBQ9Y5S2 1711 aa27.32■■□□□ 1.96
SHB-201ENST00000377707 TMC1Q8TDI8 760 aa27.3■■□□□ 1.96
SHB-201ENST00000377707 C9orf84Q5VXU9 1444 aa27.3■■□□□ 1.96
SHB-201ENST00000377707 ADGBQ8N7X0 1667 aa27.29■■□□□ 1.96
SHB-201ENST00000377707 SAMD9LQ8IVG5 1584 aa27.29■■□□□ 1.96
SHB-201ENST00000377707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.28■■□□□ 1.96
SHB-201ENST00000377707 PREX2Q70Z35 1606 aa27.28■■□□□ 1.96
SHB-201ENST00000377707 MYT1LQ9UL68 1186 aa27.27■■□□□ 1.96
SHB-201ENST00000377707 EFCAB2Q5VUJ9 269 aa27.27■■□□□ 1.96
SHB-201ENST00000377707 PLCH2O75038 1416 aa27.27■■□□□ 1.96
SHB-201ENST00000377707 ADGRL2O95490 1459 aa27.27■■□□□ 1.96
SHB-201ENST00000377707 ERICH6BQ5W0A0 696 aa27.26■■□□□ 1.96
SHB-201ENST00000377707 POLR1AO95602 1720 aaPredicted RBP27.26■■□□□ 1.95
SHB-201ENST00000377707 KDM5CP41229 1560 aa27.24■■□□□ 1.95
SHB-201ENST00000377707 PNISRQ8TF01 805 aaKnown RBP27.24■■□□□ 1.95
SHB-201ENST00000377707 CROCC2H7BZ55 1655 aa27.24■■□□□ 1.95
SHB-201ENST00000377707 KIF15Q9NS87 1388 aa27.24■■□□□ 1.95
SHB-201ENST00000377707 CCDC136Q96JN2 1154 aa27.24■■□□□ 1.95
SHB-201ENST00000377707 RIMBP3CA6NJZ7 1639 aa27.24■■□□□ 1.95
SHB-201ENST00000377707 RIMBP3BA6NNM3 1639 aa27.24■■□□□ 1.95
SHB-201ENST00000377707 RIMBP3Q9UFD9 1639 aa27.24■■□□□ 1.95
SHB-201ENST00000377707 SYCP2Q9BX26 1530 aa27.24■■□□□ 1.95
SHB-201ENST00000377707 NUDCQ9Y266 331 aa27.21■■□□□ 1.95
SHB-201ENST00000377707 ARHGEF12Q9NZN5 1544 aa27.2■■□□□ 1.95
SHB-201ENST00000377707 NBPF1Q3BBV0 1214 aa27.2■■□□□ 1.95
SHB-201ENST00000377707 PLEKHG5O94827 1062 aa27.2■■□□□ 1.94
SHB-201ENST00000377707 AFAP1Q8N556 730 aa27.2■■□□□ 1.94
SHB-201ENST00000377707 MYO5CQ9NQX4 1742 aa27.2■■□□□ 1.94
SHB-201ENST00000377707 FANCIQ9NVI1 1328 aa27.19■■□□□ 1.94
SHB-201ENST00000377707 ROCK2O75116 1388 aaKnown RBP27.16■■□□□ 1.94
SHB-201ENST00000377707 CCDC141Q6ZP82 1450 aa27.15■■□□□ 1.94
SHB-201ENST00000377707 SMG6Q86US8 1419 aaKnown RBP27.15■■□□□ 1.94
SHB-201ENST00000377707 PKNOX2Q96KN3 472 aa27.14■■□□□ 1.94
SHB-201ENST00000377707 TRAPPC8Q9Y2L5 1435 aa27.14■■□□□ 1.93
SHB-201ENST00000377707 RALGAPBQ86X10 1494 aa27.13■■□□□ 1.93
SHB-201ENST00000377707 RSPH4AQ5TD94 716 aa27.1■■□□□ 1.93
SHB-201ENST00000377707 FANCAO15360 1455 aa27.1■■□□□ 1.93
SHB-201ENST00000377707 UHRF1BP1Q6BDS2 1440 aa27.1■■□□□ 1.93
SHB-201ENST00000377707 DEKP35659 375 aaKnown RBP27.09■■□□□ 1.93
SHB-201ENST00000377707 ARHGEF5Q12774 1597 aa27.08■■□□□ 1.93
SHB-201ENST00000377707 CC2D1BQ5T0F9 858 aaKnown RBP27.08■■□□□ 1.92
SHB-201ENST00000377707 SHANK2Q9UPX8 1470 aa27.06■■□□□ 1.92
SHB-201ENST00000377707 CD109Q6YHK3 1445 aa27.06■■□□□ 1.92
SHB-201ENST00000377707 ABCA9Q8IUA7 1624 aa27.06■■□□□ 1.92
SHB-201ENST00000377707 ARID4BQ4LE39 1312 aaPredicted RBP27.04■■□□□ 1.92
SHB-201ENST00000377707 MYBBP1AQ9BQG0 1328 aaKnown RBP27.03■■□□□ 1.92
SHB-201ENST00000377707 PLEKHH2Q8IVE3 1493 aa27.03■■□□□ 1.92
SHB-201ENST00000377707 SCAPERQ9BY12 1400 aa27.02■■□□□ 1.92
SHB-201ENST00000377707 ABCC1P33527 1531 aa27.02■■□□□ 1.92
SHB-201ENST00000377707 SPAG9O60271 1321 aaKnown RBP27.01■■□□□ 1.91
SHB-201ENST00000377707 CDCA7LQ96GN5 454 aa27■■□□□ 1.91
SHB-201ENST00000377707 FAM135AQ9P2D6 1515 aa27■■□□□ 1.91
SHB-201ENST00000377707 PAK3O75914 559 aaPredicted RBP27■■□□□ 1.91
SHB-201ENST00000377707 PODXL2Q9NZ53 605 aa26.99■■□□□ 1.91
SHB-201ENST00000377707 CCDC144AA2RUR9 1427 aa26.99■■□□□ 1.91
SHB-201ENST00000377707 FAM69CQ0P6D2 419 aa26.99■■□□□ 1.91
SHB-201ENST00000377707 ADGRL1O94910 1474 aa26.99■■□□□ 1.91
SHB-201ENST00000377707 RNF123Q5XPI4 1314 aa26.98■■□□□ 1.91
SHB-201ENST00000377707 EXOC6Q8TAG9 804 aa26.97■■□□□ 1.91
SHB-201ENST00000377707 RALBP1Q15311 655 aa26.95■■□□□ 1.9
SHB-201ENST00000377707 LRPPRCP42704 1394 aaKnown RBP26.94■■□□□ 1.9
SHB-201ENST00000377707 DISP3Q9P2K9 1392 aa26.94■■□□□ 1.9
SHB-201ENST00000377707 PLA2R1Q13018 1463 aa26.94■■□□□ 1.9
SHB-201ENST00000377707 NBR1Q14596 966 aa26.93■■□□□ 1.9
SHB-201ENST00000377707 PRAG1Q86YV5 1406 aa26.93■■□□□ 1.9
SHB-201ENST00000377707 ARAP3Q8WWN8 1544 aa26.93■■□□□ 1.9
SHB-201ENST00000377707 KDM5DQ9BY66 1539 aa26.93■■□□□ 1.9
SHB-201ENST00000377707 BRD4O60885 1362 aaPredicted RBP26.93■■□□□ 1.9
SHB-201ENST00000377707 PLIN1O60240 522 aa26.92■■□□□ 1.9
SHB-201ENST00000377707 RAPGEF3O95398 923 aa26.92■■□□□ 1.9
SHB-201ENST00000377707 PER1O15534 1290 aaPredicted RBP26.92■■□□□ 1.9
SHB-201ENST00000377707 PANK3Q9H999 370 aa26.92■■□□□ 1.9
SHB-201ENST00000377707 SKAP1Q86WV1 359 aa26.9■■□□□ 1.9
SHB-201ENST00000377707 NLRP13Q86W25 1043 aa26.89■■□□□ 1.9
SHB-201ENST00000377707 KTN1Q86UP2 1357 aaKnown RBP26.89■■□□□ 1.9
SHB-201ENST00000377707 RRP1P56182 461 aaKnown RBP26.89■■□□□ 1.89
SHB-201ENST00000377707 TESK2Q96S53 571 aa26.88■■□□□ 1.89
SHB-201ENST00000377707 RCAN3Q9UKA8 241 aa26.88■■□□□ 1.89
SHB-201ENST00000377707 A2MP01023 1474 aa26.88■■□□□ 1.89
SHB-201ENST00000377707 MAST1Q9Y2H9 1570 aa26.85■■□□□ 1.89
SHB-201ENST00000377707 NPM2Q86SE8 214 aaKnown RBP26.85■■□□□ 1.89
SHB-201ENST00000377707 NOP58Q9Y2X3 529 aaKnown RBP26.84■■□□□ 1.89
SHB-201ENST00000377707 PARD3Q8TEW0 1356 aa26.83■■□□□ 1.89
SHB-201ENST00000377707 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.83■■□□□ 1.89
SHB-201ENST00000377707 TRPM1Q7Z4N2 1603 aa26.82■■□□□ 1.88
SHB-201ENST00000377707 E9PCH4 1651 aa26.8■■□□□ 1.88
SHB-201ENST00000377707 ZFYVE16Q7Z3T8 1539 aa26.8■■□□□ 1.88
SHB-201ENST00000377707 KIF3BO15066 747 aa26.78■■□□□ 1.88
SHB-201ENST00000377707 PLXNC1O60486 1568 aa26.77■■□□□ 1.88
SHB-201ENST00000377707 DUOX2Q9NRD8 1548 aa26.77■■□□□ 1.88
SHB-201ENST00000377707 RTEL1-TNFRSF6BF6WH68 1400 aa26.76■■□□□ 1.87
SHB-201ENST00000377707 ATP7AQ04656 1500 aa26.76■■□□□ 1.87
SHB-201ENST00000377707 ERBINQ96RT1 1412 aa26.73■■□□□ 1.87
SHB-201ENST00000377707 ZNF518AQ6AHZ1 1483 aa26.73■■□□□ 1.87
SHB-201ENST00000377707 TMF1P82094 1093 aa26.73■■□□□ 1.87
SHB-201ENST00000377707 POGZQ7Z3K3 1410 aa26.73■■□□□ 1.87
SHB-201ENST00000377707 ADAMTS8Q9UP79 889 aa26.72■■□□□ 1.87
SHB-201ENST00000377707 ANP32AP39687 249 aaKnown RBP26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms