RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 ERCC6L2Q5T890 1561 aa24.4■■□□□ 1.5
SF1-203ENST00000377387 MYBBP1AQ9BQG0 1328 aaKnown RBP24.37■■□□□ 1.49
SF1-203ENST00000377387 CC2D1BQ5T0F9 858 aaKnown RBP24.35■■□□□ 1.49
SF1-203ENST00000377387 CHD1O14646 1710 aa24.34■■□□□ 1.49
SF1-203ENST00000377387 SHANK2Q9UPX8 1470 aa24.34■■□□□ 1.49
SF1-203ENST00000377387 RALBP1Q15311 655 aa24.33■■□□□ 1.48
SF1-203ENST00000377387 CCDC144AA2RUR9 1427 aa24.33■■□□□ 1.48
SF1-203ENST00000377387 ARHGEF12Q9NZN5 1544 aa24.3■■□□□ 1.48
SF1-203ENST00000377387 RNF123Q5XPI4 1314 aa24.29■■□□□ 1.48
SF1-203ENST00000377387 FAM135AQ9P2D6 1515 aa24.29■■□□□ 1.48
SF1-203ENST00000377387 CCDC141Q6ZP82 1450 aa24.28■■□□□ 1.48
SF1-203ENST00000377387 BRD4O60885 1362 aaPredicted RBP24.28■■□□□ 1.48
SF1-203ENST00000377387 SAMD9LQ8IVG5 1584 aa24.28■■□□□ 1.48
SF1-203ENST00000377387 SYCP2Q9BX26 1530 aa24.26■■□□□ 1.47
SF1-203ENST00000377387 KTN1Q86UP2 1357 aaKnown RBP24.26■■□□□ 1.47
SF1-203ENST00000377387 ARHGAP5Q13017 1502 aa24.25■■□□□ 1.47
SF1-203ENST00000377387 NLRP13Q86W25 1043 aa24.25■■□□□ 1.47
SF1-203ENST00000377387 EXOC6Q8TAG9 804 aa24.25■■□□□ 1.47
SF1-203ENST00000377387 CDCA7LQ96GN5 454 aa24.25■■□□□ 1.47
SF1-203ENST00000377387 CDC42BPBQ9Y5S2 1711 aa24.25■■□□□ 1.47
SF1-203ENST00000377387 LRPPRCP42704 1394 aaKnown RBP24.24■■□□□ 1.47
SF1-203ENST00000377387 TTC37Q6PGP7 1564 aa24.24■■□□□ 1.47
SF1-203ENST00000377387 KDM5DQ9BY66 1539 aa24.24■■□□□ 1.47
SF1-203ENST00000377387 PAK3O75914 559 aaPredicted RBP24.23■■□□□ 1.47
SF1-203ENST00000377387 PRAG1Q86YV5 1406 aa24.23■■□□□ 1.47
SF1-203ENST00000377387 BCL11AQ9H165 835 aa24.23■■□□□ 1.47
SF1-203ENST00000377387 PANK3Q9H999 370 aa24.23■■□□□ 1.47
SF1-203ENST00000377387 RCAN3Q9UKA8 241 aa24.23■■□□□ 1.47
SF1-203ENST00000377387 RSPH4AQ5TD94 716 aa24.22■■□□□ 1.47
SF1-203ENST00000377387 RRP1P56182 461 aaKnown RBP24.21■■□□□ 1.47
SF1-203ENST00000377387 NBR1Q14596 966 aa24.21■■□□□ 1.47
SF1-203ENST00000377387 PER1O15534 1290 aaPredicted RBP24.21■■□□□ 1.47
SF1-203ENST00000377387 DISP3Q9P2K9 1392 aa24.2■■□□□ 1.46
SF1-203ENST00000377387 PLEKHH2Q8IVE3 1493 aa24.19■■□□□ 1.46
SF1-203ENST00000377387 ARHGEF5Q12774 1597 aa24.19■■□□□ 1.46
SF1-203ENST00000377387 NOP58Q9Y2X3 529 aaKnown RBP24.19■■□□□ 1.46
SF1-203ENST00000377387 PLA2R1Q13018 1463 aa24.19■■□□□ 1.46
SF1-203ENST00000377387 PLIN1O60240 522 aa24.18■■□□□ 1.46
SF1-203ENST00000377387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.18■■□□□ 1.467e-7■■■□□ 16
SF1-203ENST00000377387 TESK2Q96S53 571 aa24.17■■□□□ 1.46
SF1-203ENST00000377387 A2MP01023 1474 aa24.16■■□□□ 1.46
SF1-203ENST00000377387 NPM2Q86SE8 214 aaKnown RBP24.15■■□□□ 1.46
SF1-203ENST00000377387 PARD3Q8TEW0 1356 aa24.15■■□□□ 1.46
SF1-203ENST00000377387 PREX2Q70Z35 1606 aa24.15■■□□□ 1.46
SF1-203ENST00000377387 ANP32AP39687 249 aaKnown RBP24.13■■□□□ 1.45
SF1-203ENST00000377387 TMF1P82094 1093 aa24.12■■□□□ 1.45
SF1-203ENST00000377387 AFAP1Q8N556 730 aa24.12■■□□□ 1.45
SF1-203ENST00000377387 TRPM1Q7Z4N2 1603 aa24.11■■□□□ 1.45
SF1-203ENST00000377387 MYT1LQ9UL68 1186 aa24.09■■□□□ 1.45
SF1-203ENST00000377387 ERBINQ96RT1 1412 aa24.08■■□□□ 1.44
SF1-203ENST00000377387 SKAP1Q86WV1 359 aa24.07■■□□□ 1.44
SF1-203ENST00000377387 E9PCH4 1651 aa24.07■■□□□ 1.44
SF1-203ENST00000377387 ABCC2Q92887 1545 aa24.06■■□□□ 1.44
SF1-203ENST00000377387 IPO9Q96P70 1041 aaKnown RBP24.04■■□□□ 1.44
SF1-203ENST00000377387 TRAPPC8Q9Y2L5 1435 aa24.04■■□□□ 1.44
SF1-203ENST00000377387 PDE3BQ13370 1112 aa24.04■■□□□ 1.44
SF1-203ENST00000377387 ADAMTS8Q9UP79 889 aa24.04■■□□□ 1.44
SF1-203ENST00000377387 GPRASP1Q5JY77 1395 aa24.04■■□□□ 1.44
SF1-203ENST00000377387 COL17A1Q9UMD9 1497 aaPredicted RBP24.04■■□□□ 1.44
SF1-203ENST00000377387 ZBTB47Q9UFB7 747 aaPredicted RBP24.04■■□□□ 1.44
SF1-203ENST00000377387 EFCAB2Q5VUJ9 269 aa24.03■■□□□ 1.44
SF1-203ENST00000377387 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
SF1-203ENST00000377387 KNSTRNQ9Y448 316 aa24.01■■□□□ 1.43
SF1-203ENST00000377387 CRBNQ96SW2 442 aa24■■□□□ 1.43
SF1-203ENST00000377387 DEKP35659 375 aaKnown RBP23.99■■□□□ 1.43
SF1-203ENST00000377387 MYO5CQ9NQX4 1742 aa23.98■■□□□ 1.43
SF1-203ENST00000377387 UNC13BO14795 1591 aa23.97■■□□□ 1.43
SF1-203ENST00000377387 C20orf194Q5TEA3 1177 aa23.96■■□□□ 1.43
SF1-203ENST00000377387 PRDM15P57071 1507 aaPredicted RBP23.96■■□□□ 1.43
SF1-203ENST00000377387 WDR43Q15061 677 aaKnown RBP eCLIP23.96■■□□□ 1.43
SF1-203ENST00000377387 WASHC2CQ9Y4E1 1318 aa23.95■■□□□ 1.43
SF1-203ENST00000377387 ZCCHC11Q5TAX3 1644 aaKnown RBP23.95■■□□□ 1.43
SF1-203ENST00000377387 PDE4AP27815 886 aa23.95■■□□□ 1.42
SF1-203ENST00000377387 PLCH2O75038 1416 aa23.95■■□□□ 1.42
SF1-203ENST00000377387 SPAG9O60271 1321 aaKnown RBP23.95■■□□□ 1.42
SF1-203ENST00000377387 PPP2R1AP30153 589 aa23.93■■□□□ 1.42
SF1-203ENST00000377387 DUOX2Q9NRD8 1548 aa23.93■■□□□ 1.42
SF1-203ENST00000377387 TCERG1O14776 1098 aaKnown RBP23.93■■□□□ 1.42
SF1-203ENST00000377387 IQGAP3Q86VI3 1631 aa23.92■■□□□ 1.42
SF1-203ENST00000377387 MAST1Q9Y2H9 1570 aa23.91■■□□□ 1.42
SF1-203ENST00000377387 CCDC146Q8IYE0 955 aa23.91■■□□□ 1.42
SF1-203ENST00000377387 MAGI2Q86UL8 1455 aa23.9■■□□□ 1.42
SF1-203ENST00000377387 BLMP54132 1417 aaPredicted RBP23.87■■□□□ 1.41
SF1-203ENST00000377387 KIF3BO15066 747 aa23.87■■□□□ 1.41
SF1-203ENST00000377387 AMER1Q5JTC6 1135 aaPredicted RBP23.87■■□□□ 1.41
SF1-203ENST00000377387 PLXNC1O60486 1568 aa23.86■■□□□ 1.41
SF1-203ENST00000377387 LAS1LQ9Y4W2 734 aaKnown RBP23.86■■□□□ 1.41
SF1-203ENST00000377387 BACH2Q9BYV9 841 aa23.85■■□□□ 1.41
SF1-203ENST00000377387 EIF2AK4Q9P2K8 1649 aaKnown RBP23.85■■□□□ 1.41
SF1-203ENST00000377387 PLEKHH1Q9ULM0 1364 aa23.85■■□□□ 1.41
SF1-203ENST00000377387 CLASP1Q7Z460 1538 aa23.84■■□□□ 1.41
SF1-203ENST00000377387 WDR7Q9Y4E6 1490 aa23.84■■□□□ 1.41
SF1-203ENST00000377387 RTL5Q5HYW3 569 aaPredicted RBP23.83■■□□□ 1.41
SF1-203ENST00000377387 CFAP70Q5T0N1 1121 aa23.83■■□□□ 1.4
SF1-203ENST00000377387 ABCC1P33527 1531 aa23.82■■□□□ 1.4
SF1-203ENST00000377387 ATP10AO60312 1499 aa23.82■■□□□ 1.4
SF1-203ENST00000377387 DUSP27Q5VZP5 1158 aa23.81■■□□□ 1.4
SF1-203ENST00000377387 SCAPERQ9BY12 1400 aa23.81■■□□□ 1.4
SF1-203ENST00000377387 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
SF1-203ENST00000377387 CDCA8Q53HL2 280 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms