RNA–Protein interactions for RNA: ENST00000376108.7

CLCN5-204, Transcript of chloride voltage-gated channel 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN5, Length 2,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-204ENST00000376108 CUX2O14529 1486 aa11.21□□□□□ -0.62
CLCN5-204ENST00000376108 MAPKBP1O60336 1514 aa11.21□□□□□ -0.62
CLCN5-204ENST00000376108 MSNP26038 577 aaKnown RBP11.21□□□□□ -0.62
CLCN5-204ENST00000376108 ZBTB9Q96C00 473 aa11.21□□□□□ -0.62
CLCN5-204ENST00000376108 CARD10Q9BWT7 1032 aa11.21□□□□□ -0.62
CLCN5-204ENST00000376108 PLCD4Q9BRC7 762 aa11.2□□□□□ -0.62
CLCN5-204ENST00000376108 CCDC184Q52MB2 194 aa11.2□□□□□ -0.62
CLCN5-204ENST00000376108 PRR29P0C7W0 189 aa11.19□□□□□ -0.62
CLCN5-204ENST00000376108 EXOC6Q8TAG9 804 aa11.17□□□□□ -0.62
CLCN5-204ENST00000376108 TRIM6-TRIM34B2RNG4 842 aa11.17□□□□□ -0.62
CLCN5-204ENST00000376108 TPRNQ4KMQ1 711 aa11.17□□□□□ -0.62
CLCN5-204ENST00000376108 TRIM34Q9BYJ4 488 aa11.17□□□□□ -0.62
CLCN5-204ENST00000376108 CLSTN1O94985 981 aa11.16□□□□□ -0.62
CLCN5-204ENST00000376108 EGFL6Q8IUX8 553 aa11.16□□□□□ -0.62
CLCN5-204ENST00000376108 ZNF592Q92610 1267 aa11.16□□□□□ -0.62
CLCN5-204ENST00000376108 BECN1Q14457 450 aa11.16□□□□□ -0.62
CLCN5-204ENST00000376108 ATP2B3Q16720 1220 aa11.16□□□□□ -0.62
CLCN5-204ENST00000376108 ZNF771Q7L3S4 317 aaPredicted RBP11.16□□□□□ -0.62
CLCN5-204ENST00000376108 CCDC173Q0VFZ6 552 aa11.14□□□□□ -0.63
CLCN5-204ENST00000376108 SASS6Q6UVJ0 657 aa11.14□□□□□ -0.63
CLCN5-204ENST00000376108 SLKQ9H2G2 1235 aaPredicted RBP11.14□□□□□ -0.63
CLCN5-204ENST00000376108 FAM161AQ3B820 660 aa11.14□□□□□ -0.63
CLCN5-204ENST00000376108 LOC102724159A0A0B4J2E5 919 aa11.13□□□□□ -0.63
CLCN5-204ENST00000376108 MCM4P33991 863 aa11.13□□□□□ -0.63
CLCN5-204ENST00000376108 PWP2Q15269 919 aaKnown RBP11.13□□□□□ -0.63
CLCN5-204ENST00000376108 NBPF1Q3BBV0 1214 aa11.13□□□□□ -0.63
CLCN5-204ENST00000376108 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.13□□□□□ -0.63
CLCN5-204ENST00000376108 ZNF500O60304 480 aaPredicted RBP11.13□□□□□ -0.63
CLCN5-204ENST00000376108 IGSF3O75054 1194 aa11.13□□□□□ -0.63
CLCN5-204ENST00000376108 EP400NLQ6ZTU2 488 aa11.13□□□□□ -0.63
CLCN5-204ENST00000376108 MRS2Q9HD23 443 aa11.13□□□□□ -0.63
CLCN5-204ENST00000376108 TULP2O00295 520 aa11.12□□□□□ -0.63
CLCN5-204ENST00000376108 TRAK2O60296 914 aa11.12□□□□□ -0.63
CLCN5-204ENST00000376108 CAPN2P17655 700 aa11.12□□□□□ -0.63
CLCN5-204ENST00000376108 SKAP1Q86WV1 359 aa11.12□□□□□ -0.63
CLCN5-204ENST00000376108 TIGD1Q96MW7 591 aa11.12□□□□□ -0.63
CLCN5-204ENST00000376108 PPP1R9BQ96SB3 815 aa11.12□□□□□ -0.63
CLCN5-204ENST00000376108 ANTXR1Q9H6X2 564 aa11.12□□□□□ -0.63
CLCN5-204ENST00000376108 CCDC66A2RUB6 948 aa11.12□□□□□ -0.63
CLCN5-204ENST00000376108 C8orf34Q49A92 452 aa11.12□□□□□ -0.63
CLCN5-204ENST00000376108 BANK1Q8NDB2 785 aa11.12□□□□□ -0.63
CLCN5-204ENST00000376108 CFAP44Q96MT7 982 aa11.12□□□□□ -0.63
CLCN5-204ENST00000376108 TSPYL1Q9H0U9 437 aa11.12□□□□□ -0.63
CLCN5-204ENST00000376108 CEP120Q8N960 986 aa11.12□□□□□ -0.63
CLCN5-204ENST00000376108 CSPP1Q1MSJ5 1256 aa11.11□□□□□ -0.63
CLCN5-204ENST00000376108 RRP1P56182 461 aaKnown RBP11.11□□□□□ -0.63
CLCN5-204ENST00000376108 LMOD3Q0VAK6 560 aa11.11□□□□□ -0.63
CLCN5-204ENST00000376108 MLECQ14165 292 aa11.1□□□□□ -0.63
CLCN5-204ENST00000376108 EFCC1Q9HA90 598 aa11.1□□□□□ -0.63
CLCN5-204ENST00000376108 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
CLCN5-204ENST00000376108 XPCQ01831 940 aaPredicted RBP11.1□□□□□ -0.63
CLCN5-204ENST00000376108 KIF3AQ9Y496 699 aa11.09□□□□□ -0.63
CLCN5-204ENST00000376108 NBPF20Q3BBV1 942 aa11.09□□□□□ -0.63
CLCN5-204ENST00000376108 ZNF710Q8N1W2 664 aa11.09□□□□□ -0.63
CLCN5-204ENST00000376108 CEP164Q9UPV0 1460 aa11.07□□□□□ -0.64
CLCN5-204ENST00000376108 HS1BP3Q53T59 392 aa11.07□□□□□ -0.64
CLCN5-204ENST00000376108 VPS8Q8N3P4 1428 aa11.07□□□□□ -0.64
CLCN5-204ENST00000376108 IRF6O14896 467 aa11.07□□□□□ -0.64
CLCN5-204ENST00000376108 NOL7Q9UMY1 257 aaKnown RBP11.07□□□□□ -0.64
CLCN5-204ENST00000376108 SPDYE4A6NLX3 237 aa11.06□□□□□ -0.64
CLCN5-204ENST00000376108 GAS2L3Q86XJ1 694 aa11.06□□□□□ -0.64
CLCN5-204ENST00000376108 SIRT1Q96EB6 747 aa11.06□□□□□ -0.64
CLCN5-204ENST00000376108 PANK3Q9H999 370 aa11.06□□□□□ -0.64
CLCN5-204ENST00000376108 CLIP1P30622 1438 aa11.06□□□□□ -0.64
CLCN5-204ENST00000376108 MYRIPQ8NFW9 859 aa11.06□□□□□ -0.64
CLCN5-204ENST00000376108 HSP90AB3PQ58FF7 597 aa11.05□□□□□ -0.64
CLCN5-204ENST00000376108 PRKRIP1Q9H875 184 aaPredicted RBP11.05□□□□□ -0.64
CLCN5-204ENST00000376108 SH3BP1Q9Y3L3 701 aa11.05□□□□□ -0.64
CLCN5-204ENST00000376108 KTN1Q86UP2 1357 aaKnown RBP11.05□□□□□ -0.64
CLCN5-204ENST00000376108 GABPB1Q06547 395 aaPredicted RBP11.05□□□□□ -0.64
CLCN5-204ENST00000376108 OS9Q13438 667 aaPredicted RBP11.05□□□□□ -0.64
CLCN5-204ENST00000376108 CT47A1Q5JQC4 288 aaPredicted RBP11.05□□□□□ -0.64
CLCN5-204ENST00000376108 MYCBPQ99417 103 aaPredicted RBP11.04□□□□□ -0.64
CLCN5-204ENST00000376108 ABCC8Q09428 1581 aa11.04□□□□□ -0.64
CLCN5-204ENST00000376108 GOLGA3Q08378 1498 aa11.04□□□□□ -0.64
CLCN5-204ENST00000376108 PPP6R1Q9UPN7 881 aa11.04□□□□□ -0.64
CLCN5-204ENST00000376108 CEP83Q9Y592 693 aa11.04□□□□□ -0.64
CLCN5-204ENST00000376108 CALCOCO1Q9P1Z2 691 aa11.03□□□□□ -0.64
CLCN5-204ENST00000376108 NINLQ9Y2I6 1382 aa11.03□□□□□ -0.64
CLCN5-204ENST00000376108 SATB1Q01826 763 aa11.03□□□□□ -0.64
CLCN5-204ENST00000376108 SEMA3FQ13275 785 aa11.03□□□□□ -0.64
CLCN5-204ENST00000376108 HMGB1P09429 215 aaKnown RBP11.02□□□□□ -0.64
CLCN5-204ENST00000376108 BRPF1P55201 1214 aaPredicted RBP11.02□□□□□ -0.64
CLCN5-204ENST00000376108 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.02□□□□□ -0.64
CLCN5-204ENST00000376108 CNTLNQ9NXG0 1405 aa11.02□□□□□ -0.64
CLCN5-204ENST00000376108 SOGA1O94964 1423 aa11.02□□□□□ -0.65
CLCN5-204ENST00000376108 NASPP49321 788 aaPredicted RBP11.02□□□□□ -0.65
CLCN5-204ENST00000376108 RAB3GAP2Q9H2M9 1393 aa11.02□□□□□ -0.65
CLCN5-204ENST00000376108 DDX11L8A8MPP1 907 aa11.02□□□□□ -0.65
CLCN5-204ENST00000376108 NCAPGQ9BPX3 1015 aa11.02□□□□□ -0.65
CLCN5-204ENST00000376108 FEZ2Q9UHY8 353 aaPredicted RBP11.02□□□□□ -0.65
CLCN5-204ENST00000376108 TNNT3P45378 269 aaPredicted RBP11.01□□□□□ -0.65
CLCN5-204ENST00000376108 MPNDQ8N594 471 aa11.01□□□□□ -0.65
CLCN5-204ENST00000376108 RRBP1Q9P2E9 1410 aaKnown RBP11.01□□□□□ -0.65
CLCN5-204ENST00000376108 JARID2Q92833 1246 aaPredicted RBP11.01□□□□□ -0.65
CLCN5-204ENST00000376108 SMC4Q9NTJ3 1288 aa11.01□□□□□ -0.65
CLCN5-204ENST00000376108 VIRMAQ69YN4 1812 aaKnown RBP11.01□□□□□ -0.65
CLCN5-204ENST00000376108 USP19O94966 1318 aa11□□□□□ -0.65
CLCN5-204ENST00000376108 SLFN14P0C7P3 912 aa11□□□□□ -0.65
CLCN5-204ENST00000376108 GTF2F1P35269 517 aaKnown RBP eCLIP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms