RNA–Protein interactions for RNA: ENST00000375987.3

LINC01854-201, Transcript of long intergenic non-protein coding RNA 1854, humanhuman

TSL 2 BASIC

Gene LINC01854, Length 2,213 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01854-201ENST00000375987 ABCC5O15440 1437 aa13.77□□□□□ -0.21
LINC01854-201ENST00000375987 PTPRGP23470 1445 aa13.77□□□□□ -0.21
LINC01854-201ENST00000375987 EIF5BO60841 1220 aaKnown RBP13.76□□□□□ -0.21
LINC01854-201ENST00000375987 SENP3-EIF4A1A0A087X0R7 540 aa13.76□□□□□ -0.21
LINC01854-201ENST00000375987 PDE3BQ13370 1112 aa13.75□□□□□ -0.21
LINC01854-201ENST00000375987 RALBP1Q15311 655 aa13.75□□□□□ -0.21
LINC01854-201ENST00000375987 PZPP20742 1482 aa13.75□□□□□ -0.21
LINC01854-201ENST00000375987 OSCARQ8IYS5 282 aa13.75□□□□□ -0.21
LINC01854-201ENST00000375987 ZNF326Q5BKZ1 582 aaKnown RBP13.74□□□□□ -0.21
LINC01854-201ENST00000375987 KIAA1107Q9UPP5 1409 aa13.74□□□□□ -0.21
LINC01854-201ENST00000375987 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
LINC01854-201ENST00000375987 GSE1Q14687 1217 aa13.72□□□□□ -0.21
LINC01854-201ENST00000375987 ATP10BO94823 1461 aa13.72□□□□□ -0.21
LINC01854-201ENST00000375987 UHRF1BP1Q6BDS2 1440 aa13.71□□□□□ -0.21
LINC01854-201ENST00000375987 ABCC2Q92887 1545 aa13.71□□□□□ -0.22
LINC01854-201ENST00000375987 ADGBQ8N7X0 1667 aa13.7□□□□□ -0.22
LINC01854-201ENST00000375987 E9PCH4 1651 aa13.69□□□□□ -0.22
LINC01854-201ENST00000375987 UHRF1BP1LA0JNW5 1464 aa13.69□□□□□ -0.22
LINC01854-201ENST00000375987 ADCY10Q96PN6 1610 aa13.69□□□□□ -0.22
LINC01854-201ENST00000375987 CARD11Q9BXL7 1154 aa13.69□□□□□ -0.22
LINC01854-201ENST00000375987 ARID3CA6NKF2 412 aa13.68□□□□□ -0.22
LINC01854-201ENST00000375987 NCBP3Q53F19 620 aaKnown RBP13.68□□□□□ -0.22
LINC01854-201ENST00000375987 NLRP13Q86W25 1043 aa13.68□□□□□ -0.22
LINC01854-201ENST00000375987 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.68□□□□□ -0.22
LINC01854-201ENST00000375987 ARHGEF12Q9NZN5 1544 aa13.68□□□□□ -0.22
LINC01854-201ENST00000375987 NFKBIBQ15653 356 aa13.67□□□□□ -0.22
LINC01854-201ENST00000375987 ZNF644Q9H582 1327 aaPredicted RBP13.66□□□□□ -0.22
LINC01854-201ENST00000375987 TROQ12816 1431 aaPredicted RBP13.66□□□□□ -0.22
LINC01854-201ENST00000375987 BRPF3Q9ULD4 1205 aa13.66□□□□□ -0.22
LINC01854-201ENST00000375987 PKD2Q13563 968 aa13.65□□□□□ -0.22
LINC01854-201ENST00000375987 ZMYM4Q5VZL5 1548 aa13.64□□□□□ -0.23
LINC01854-201ENST00000375987 ADGRL2O95490 1459 aa13.64□□□□□ -0.23
LINC01854-201ENST00000375987 INSRP06213 1382 aa13.64□□□□□ -0.23
LINC01854-201ENST00000375987 PARD3Q8TEW0 1356 aa13.64□□□□□ -0.23
LINC01854-201ENST00000375987 ZCCHC11Q5TAX3 1644 aaKnown RBP13.64□□□□□ -0.23
LINC01854-201ENST00000375987 CAMSAP2Q08AD1 1489 aa13.64□□□□□ -0.23
LINC01854-201ENST00000375987 ST20-MTHFSA0A0A6YYL1 179 aa13.63□□□□□ -0.23
LINC01854-201ENST00000375987 ITSN2Q9NZM3 1697 aa13.63□□□□□ -0.23
LINC01854-201ENST00000375987 PLEKHH2Q8IVE3 1493 aa13.63□□□□□ -0.23
LINC01854-201ENST00000375987 UBE2Q2Q8WVN8 375 aa13.62□□□□□ -0.23
LINC01854-201ENST00000375987 CROCC2H7BZ55 1655 aa13.62□□□□□ -0.23
LINC01854-201ENST00000375987 CRBNQ96SW2 442 aa13.62□□□□□ -0.23
LINC01854-201ENST00000375987 FRAT1Q92837 279 aaPredicted RBP13.61□□□□□ -0.23
LINC01854-201ENST00000375987 ABCC10Q5T3U5 1492 aa13.61□□□□□ -0.23
LINC01854-201ENST00000375987 PLIN1O60240 522 aa13.6□□□□□ -0.23
LINC01854-201ENST00000375987 CDCA7LQ96GN5 454 aa13.6□□□□□ -0.23
LINC01854-201ENST00000375987 ANKRD30AQ9BXX3 1397 aa13.6□□□□□ -0.23
LINC01854-201ENST00000375987 BLMP54132 1417 aaPredicted RBP13.6□□□□□ -0.23
LINC01854-201ENST00000375987 CDC42BPAQ5VT25 1732 aa13.59□□□□□ -0.23
LINC01854-201ENST00000375987 ANKRD50Q9ULJ7 1429 aa13.59□□□□□ -0.23
LINC01854-201ENST00000375987 CENPQQ7L2Z9 268 aaPredicted RBP13.59□□□□□ -0.23
LINC01854-201ENST00000375987 CFDP1Q9UEE9 299 aaPredicted RBP13.58□□□□□ -0.24
LINC01854-201ENST00000375987 KDM2BQ8NHM5 1336 aa13.58□□□□□ -0.24
LINC01854-201ENST00000375987 FAM161AQ3B820 660 aa13.58□□□□□ -0.24
LINC01854-201ENST00000375987 SLC4A3P48751 1232 aa13.56□□□□□ -0.24
LINC01854-201ENST00000375987 GPATCH8Q9UKJ3 1502 aaKnown RBP13.56□□□□□ -0.24
LINC01854-201ENST00000375987 RIMBP3CA6NJZ7 1639 aa13.56□□□□□ -0.24
LINC01854-201ENST00000375987 RIMBP3BA6NNM3 1639 aa13.56□□□□□ -0.24
LINC01854-201ENST00000375987 RIMBP3Q9UFD9 1639 aa13.56□□□□□ -0.24
LINC01854-201ENST00000375987 SKAP1Q86WV1 359 aa13.56□□□□□ -0.24
LINC01854-201ENST00000375987 PLEKHD1A6NEE1 506 aa13.55□□□□□ -0.24
LINC01854-201ENST00000375987 NUP155O75694 1391 aa13.55□□□□□ -0.24
LINC01854-201ENST00000375987 KDM2AQ9Y2K7 1162 aa13.55□□□□□ -0.24
LINC01854-201ENST00000375987 DCAF11Q8TEB1 546 aa13.54□□□□□ -0.24
LINC01854-201ENST00000375987 RSPH6AQ9H0K4 717 aa13.54□□□□□ -0.24
LINC01854-201ENST00000375987 KDM5DQ9BY66 1539 aa13.54□□□□□ -0.24
LINC01854-201ENST00000375987 FAM43AQ8N2R8 423 aa13.54□□□□□ -0.24
LINC01854-201ENST00000375987 CDC42BPBQ9Y5S2 1711 aa13.53□□□□□ -0.24
LINC01854-201ENST00000375987 C8orf34Q49A92 452 aa13.53□□□□□ -0.24
LINC01854-201ENST00000375987 TTC37Q6PGP7 1564 aa13.53□□□□□ -0.24
LINC01854-201ENST00000375987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.52□□□□□ -0.24
LINC01854-201ENST00000375987 PER1O15534 1290 aaPredicted RBP13.52□□□□□ -0.24
LINC01854-201ENST00000375987 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.52□□□□□ -0.25
LINC01854-201ENST00000375987 SHANK2Q9UPX8 1470 aa13.51□□□□□ -0.25
LINC01854-201ENST00000375987 FRAT2O75474 233 aaPredicted RBP13.51□□□□□ -0.25
LINC01854-201ENST00000375987 ZNF777Q9ULD5 760 aaPredicted RBP13.51□□□□□ -0.25
LINC01854-201ENST00000375987 PREX2Q70Z35 1606 aa13.51□□□□□ -0.25
LINC01854-201ENST00000375987 TRPM1Q7Z4N2 1603 aa13.51□□□□□ -0.25
LINC01854-201ENST00000375987 COL17A1Q9UMD9 1497 aaPredicted RBP13.51□□□□□ -0.25
LINC01854-201ENST00000375987 C20orf194Q5TEA3 1177 aa13.51□□□□□ -0.25
LINC01854-201ENST00000375987 CC2D1BQ5T0F9 858 aaKnown RBP13.49□□□□□ -0.25
LINC01854-201ENST00000375987 PRAG1Q86YV5 1406 aa13.48□□□□□ -0.25
LINC01854-201ENST00000375987 C9orf84Q5VXU9 1444 aa13.48□□□□□ -0.25
LINC01854-201ENST00000375987 MYO5CQ9NQX4 1742 aa13.48□□□□□ -0.25
LINC01854-201ENST00000375987 WDR7Q9Y4E6 1490 aa13.47□□□□□ -0.25
LINC01854-201ENST00000375987 LAMC1P11047 1609 aa13.47□□□□□ -0.25
LINC01854-201ENST00000375987 GPRASP1Q5JY77 1395 aa13.46□□□□□ -0.25
LINC01854-201ENST00000375987 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.25
LINC01854-201ENST00000375987 RGS3P49796 1198 aa13.45□□□□□ -0.26
LINC01854-201ENST00000375987 DUSP27Q5VZP5 1158 aa13.45□□□□□ -0.26
LINC01854-201ENST00000375987 EIF3AQ14152 1382 aaKnown RBP13.45□□□□□ -0.26
LINC01854-201ENST00000375987 ASXL2Q76L83 1435 aa13.45□□□□□ -0.26
LINC01854-201ENST00000375987 SAMD9LQ8IVG5 1584 aa13.45□□□□□ -0.26
LINC01854-201ENST00000375987 ABCA9Q8IUA7 1624 aa13.44□□□□□ -0.26
LINC01854-201ENST00000375987 PRDM15P57071 1507 aaPredicted RBP13.44□□□□□ -0.26
LINC01854-201ENST00000375987 PANK3Q9H999 370 aa13.44□□□□□ -0.26
LINC01854-201ENST00000375987 CCDC144AA2RUR9 1427 aa13.43□□□□□ -0.26
LINC01854-201ENST00000375987 DISP3Q9P2K9 1392 aa13.43□□□□□ -0.26
LINC01854-201ENST00000375987 GOLGA2Q08379 1002 aa13.43□□□□□ -0.26
LINC01854-201ENST00000375987 WDR43Q15061 677 aaKnown RBP eCLIP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms