RNA–Protein interactions for RNA: ENST00000375911.1

C6orf47-202, Transcript of chromosome 6 open reading frame 47, humanhuman

APPRIS P1 BASIC

Gene C6orf47, Length 2,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf47-202ENST00000375911 ARHGEF12Q9NZN5 1544 aa23.69■■□□□ 1.38
C6orf47-202ENST00000375911 SHROOM2Q13796 1616 aa23.69■■□□□ 1.38
C6orf47-202ENST00000375911 TSPY4P0CV99 314 aa23.68■■□□□ 1.38
C6orf47-202ENST00000375911 TSPY10P0CW01 314 aa23.68■■□□□ 1.38
C6orf47-202ENST00000375911 C9orf84Q5VXU9 1444 aa23.67■■□□□ 1.38
C6orf47-202ENST00000375911 SHANK2Q9UPX8 1470 aa23.67■■□□□ 1.38
C6orf47-202ENST00000375911 E9PCH4 1651 aa23.66■■□□□ 1.38
C6orf47-202ENST00000375911 MYT1LQ9UL68 1186 aa23.66■■□□□ 1.38
C6orf47-202ENST00000375911 MYBBP1AQ9BQG0 1328 aaKnown RBP23.65■■□□□ 1.38
C6orf47-202ENST00000375911 BRD4O60885 1362 aaPredicted RBP23.65■■□□□ 1.38
C6orf47-202ENST00000375911 HNRNPMP52272 730 aaKnown RBP eCLIP23.65■■□□□ 1.38
C6orf47-202ENST00000375911 KDM5DQ9BY66 1539 aa23.63■■□□□ 1.37
C6orf47-202ENST00000375911 DCAF11Q8TEB1 546 aa23.62■■□□□ 1.37
C6orf47-202ENST00000375911 IPO9Q96P70 1041 aaKnown RBP23.61■■□□□ 1.37
C6orf47-202ENST00000375911 ANP32AP39687 249 aaKnown RBP23.61■■□□□ 1.37
C6orf47-202ENST00000375911 ERCC6L2Q5T890 1561 aa23.6■■□□□ 1.37
C6orf47-202ENST00000375911 RRP1P56182 461 aaKnown RBP23.6■■□□□ 1.37
C6orf47-202ENST00000375911 EXOC6Q8TAG9 804 aa23.59■■□□□ 1.37
C6orf47-202ENST00000375911 RALBP1Q15311 655 aa23.58■■□□□ 1.37
C6orf47-202ENST00000375911 SALL2Q9Y467 1007 aaPredicted RBP23.58■■□□□ 1.37
C6orf47-202ENST00000375911 ARHGEF5Q12774 1597 aa23.57■■□□□ 1.36
C6orf47-202ENST00000375911 ABCC2Q92887 1545 aa23.57■■□□□ 1.36
C6orf47-202ENST00000375911 RSPH4AQ5TD94 716 aa23.56■■□□□ 1.36
C6orf47-202ENST00000375911 KTN1Q86UP2 1357 aaKnown RBP23.55■■□□□ 1.36
C6orf47-202ENST00000375911 CCDC141Q6ZP82 1450 aa23.54■■□□□ 1.36
C6orf47-202ENST00000375911 PREX2Q70Z35 1606 aa23.54■■□□□ 1.36
C6orf47-202ENST00000375911 SAMD9LQ8IVG5 1584 aa23.53■■□□□ 1.36
C6orf47-202ENST00000375911 RCAN3Q9UKA8 241 aa23.53■■□□□ 1.36
C6orf47-202ENST00000375911 PARD3Q8TEW0 1356 aa23.52■■□□□ 1.36
C6orf47-202ENST00000375911 CDC42BPBQ9Y5S2 1711 aa23.51■■□□□ 1.35
C6orf47-202ENST00000375911 ZBTB47Q9UFB7 747 aaPredicted RBP23.51■■□□□ 1.35
C6orf47-202ENST00000375911 TRPM1Q7Z4N2 1603 aa23.51■■□□□ 1.35
C6orf47-202ENST00000375911 CLASP1Q7Z460 1538 aa23.5■■□□□ 1.35
C6orf47-202ENST00000375911 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.5■■□□□ 1.35
C6orf47-202ENST00000375911 NLRP13Q86W25 1043 aa23.49■■□□□ 1.35
C6orf47-202ENST00000375911 PRAG1Q86YV5 1406 aa23.49■■□□□ 1.35
C6orf47-202ENST00000375911 ARHGAP5Q13017 1502 aa23.49■■□□□ 1.35
C6orf47-202ENST00000375911 FAM135AQ9P2D6 1515 aa23.49■■□□□ 1.35
C6orf47-202ENST00000375911 TTC37Q6PGP7 1564 aa23.48■■□□□ 1.35
C6orf47-202ENST00000375911 NBPF1Q3BBV0 1214 aa23.48■■□□□ 1.35
C6orf47-202ENST00000375911 CDCA7LQ96GN5 454 aa23.48■■□□□ 1.35
C6orf47-202ENST00000375911 PER1O15534 1290 aaPredicted RBP23.46■■□□□ 1.35
C6orf47-202ENST00000375911 NPM2Q86SE8 214 aaKnown RBP23.45■■□□□ 1.35
C6orf47-202ENST00000375911 SYCP2Q9BX26 1530 aa23.45■■□□□ 1.34
C6orf47-202ENST00000375911 RGL3Q3MIN7 710 aa23.43■■□□□ 1.34
C6orf47-202ENST00000375911 UHRF1BP1LA0JNW5 1464 aa23.42■■□□□ 1.34
C6orf47-202ENST00000375911 TCERG1O14776 1098 aaKnown RBP23.42■■□□□ 1.34
C6orf47-202ENST00000375911 CCDC144AA2RUR9 1427 aa23.42■■□□□ 1.34
C6orf47-202ENST00000375911 DISP3Q9P2K9 1392 aa23.41■■□□□ 1.34
C6orf47-202ENST00000375911 COL17A1Q9UMD9 1497 aaPredicted RBP23.41■■□□□ 1.34
C6orf47-202ENST00000375911 PDE4AP27815 886 aa23.4■■□□□ 1.34
C6orf47-202ENST00000375911 PDE3BQ13370 1112 aa23.4■■□□□ 1.34
C6orf47-202ENST00000375911 CC2D1BQ5T0F9 858 aaKnown RBP23.4■■□□□ 1.34
C6orf47-202ENST00000375911 PLA2R1Q13018 1463 aa23.4■■□□□ 1.34
C6orf47-202ENST00000375911 PLEKHH2Q8IVE3 1493 aa23.4■■□□□ 1.34
C6orf47-202ENST00000375911 PLIN1O60240 522 aa23.4■■□□□ 1.34
C6orf47-202ENST00000375911 A2MP01023 1474 aa23.4■■□□□ 1.34
C6orf47-202ENST00000375911 GPRASP1Q5JY77 1395 aa23.37■■□□□ 1.33
C6orf47-202ENST00000375911 SKAP1Q86WV1 359 aa23.37■■□□□ 1.33
C6orf47-202ENST00000375911 ZCCHC11Q5TAX3 1644 aaKnown RBP23.37■■□□□ 1.33
C6orf47-202ENST00000375911 PLCH2O75038 1416 aa23.37■■□□□ 1.33
C6orf47-202ENST00000375911 RTL5Q5HYW3 569 aaPredicted RBP23.37■■□□□ 1.33
C6orf47-202ENST00000375911 TESK2Q96S53 571 aa23.37■■□□□ 1.33
C6orf47-202ENST00000375911 MAST1Q9Y2H9 1570 aa23.37■■□□□ 1.33
C6orf47-202ENST00000375911 BLMP54132 1417 aaPredicted RBP23.36■■□□□ 1.33
C6orf47-202ENST00000375911 MYO5CQ9NQX4 1742 aa23.36■■□□□ 1.33
C6orf47-202ENST00000375911 BACH2Q9BYV9 841 aa23.36■■□□□ 1.33
C6orf47-202ENST00000375911 PRDM15P57071 1507 aaPredicted RBP23.36■■□□□ 1.33
C6orf47-202ENST00000375911 EFCAB2Q5VUJ9 269 aa23.35■■□□□ 1.33
C6orf47-202ENST00000375911 PANK3Q9H999 370 aa23.33■■□□□ 1.32
C6orf47-202ENST00000375911 UNC13BO14795 1591 aa23.32■■□□□ 1.32
C6orf47-202ENST00000375911 CRBNQ96SW2 442 aa23.32■■□□□ 1.32
C6orf47-202ENST00000375911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.32■■□□□ 1.32
C6orf47-202ENST00000375911 LAMC1P11047 1609 aa23.31■■□□□ 1.32
C6orf47-202ENST00000375911 MS4A1P11836 297 aa23.31■■□□□ 1.32
C6orf47-202ENST00000375911 LAS1LQ9Y4W2 734 aaKnown RBP23.31■■□□□ 1.32
C6orf47-202ENST00000375911 ERBINQ96RT1 1412 aa23.3■■□□□ 1.32
C6orf47-202ENST00000375911 PLXNC1O60486 1568 aa23.27■■□□□ 1.32
C6orf47-202ENST00000375911 C20orf194Q5TEA3 1177 aa23.26■■□□□ 1.31
C6orf47-202ENST00000375911 WASHC2CQ9Y4E1 1318 aa23.26■■□□□ 1.31
C6orf47-202ENST00000375911 ZMYM4Q5VZL5 1548 aa23.26■■□□□ 1.31
C6orf47-202ENST00000375911 INSRP06213 1382 aa23.25■■□□□ 1.31
C6orf47-202ENST00000375911 DUOX2Q9NRD8 1548 aa23.24■■□□□ 1.31
C6orf47-202ENST00000375911 IQGAP3Q86VI3 1631 aa23.23■■□□□ 1.31
C6orf47-202ENST00000375911 EIF2AK4Q9P2K8 1649 aaKnown RBP23.23■■□□□ 1.31
C6orf47-202ENST00000375911 ABCC1P33527 1531 aa23.22■■□□□ 1.31
C6orf47-202ENST00000375911 TRAPPC8Q9Y2L5 1435 aa23.22■■□□□ 1.31
C6orf47-202ENST00000375911 TMF1P82094 1093 aa23.21■■□□□ 1.31
C6orf47-202ENST00000375911 ADAMTS8Q9UP79 889 aa23.21■■□□□ 1.31
C6orf47-202ENST00000375911 NEFMP07197 916 aa23.21■■□□□ 1.31
C6orf47-202ENST00000375911 MAGI2Q86UL8 1455 aa23.19■■□□□ 1.3
C6orf47-202ENST00000375911 RNF17Q9BXT8 1623 aaKnown RBP23.19■■□□□ 1.3
C6orf47-202ENST00000375911 WDR7Q9Y4E6 1490 aa23.18■■□□□ 1.3
C6orf47-202ENST00000375911 PLEKHH1Q9ULM0 1364 aa23.18■■□□□ 1.3
C6orf47-202ENST00000375911 SPAG9O60271 1321 aaKnown RBP23.16■■□□□ 1.3
C6orf47-202ENST00000375911 ARAP3Q8WWN8 1544 aa23.16■■□□□ 1.3
C6orf47-202ENST00000375911 AFAP1Q8N556 730 aa23.16■■□□□ 1.3
C6orf47-202ENST00000375911 KDM2BQ8NHM5 1336 aa23.15■■□□□ 1.3
C6orf47-202ENST00000375911 ATP10AO60312 1499 aa23.14■■□□□ 1.29
C6orf47-202ENST00000375911 DUSP27Q5VZP5 1158 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms